Guide to the Human Genome
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Name: MRC2 Sequence: fasta or formatted (1479aa) NCBI GI: 110624774
Description:

mannose receptor, C type 2

Referenced in:

Fibronectin Family
Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         93           2
 C cysteine            3.8         56           1
 D aspartate           4.9         72           4
 E glutamate           6.5         96           3
 F phenylalanine       3.4         51           2
 G glycine             8.2        122           3
 H histidine           2.6         39           2
 I isoleucine          3.2         47           2
 K lysine              3.1         46           3
 L leucine             9.1        135           4
 M methionine          1.3         19           1
 N asparagine          3.9         58           2
 P proline             6.4         94           4
 Q glutamine           6.1         90           2
 R arginine            5.7         84           3
 S serine              8.7        128           4
 T threonine           5.7         84           2
 V valine              3.9         58           3
 W tryptophan          4.5         67           2
 Y tyrosine            2.7         40           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mannose receptor, C type 2 
PLA2R1                0.280   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
MRC1                  0.269   mannose receptor C type 1 precursor 
MRC1L1                0.268   mannose receptor, C type 1-like 1 
PLA2R1                0.264   phospholipase A2 receptor 1 isoform 2 precursor [Hom...
LY75                  0.228   lymphocyte antigen 75 
ACAN                  0.031   aggrecan isoform 1 precursor 
NCAN                  0.031   chondroitin sulfate proteoglycan 3 
ACAN                  0.029   aggrecan isoform 2 precursor 
VCAN                  0.027   versican isoform 2 
VCAN                  0.027   versican isoform 1 
BCAN                  0.026   brevican isoform 1 
FCER2                 0.021   Fc fragment of IgE, low affinity II, receptor for (C...
CD209                 0.020   CD209 molecule isoform 7 
CD209                 0.020   CD209 molecule isoform 5 
CD209                 0.019   CD209 molecule isoform 8 
CD209                 0.019   CD209 molecule isoform 3 
CD209                 0.019   CD209 molecule isoform 6 
CD209                 0.019   CD209 molecule isoform 1 
CLEC4E                0.018   C-type lectin domain family 4, member E 
CLEC4M                0.017   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.017   C-type lectin domain family 4, member M isoform 7 [...
CLEC4M                0.017   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.017   C-type lectin domain family 4, member M isoform 2 [...
CLEC4M                0.017   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.017   C-type lectin domain family 4, member M isoform 11 ...
CLEC4M                0.017   C-type lectin domain family 4, member M isoform 1 [H...
CD209                 0.017   CD209 molecule isoform 4 
MMP9                  0.016   matrix metalloproteinase 9 preproprotein 
MMP2                  0.016   matrix metalloproteinase 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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