Guide to the Human Genome
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Name: ZFP106 Sequence: fasta or formatted (1883aa) NCBI GI: 11968023
Description:

zinc finger protein 106 homolog

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         95           2
 C cysteine            1.8         34           1
 D aspartate           5.0         94           3
 E glutamate           8.1        153           5
 F phenylalanine       2.3         43           2
 G glycine             6.3        119           3
 H histidine           3.0         57           2
 I isoleucine          3.8         72           2
 K lysine              6.8        128           5
 L leucine             8.0        150           3
 M methionine          1.3         25           1
 N asparagine          5.5        103           2
 P proline             5.3        100           2
 Q glutamine           5.4        102           2
 R arginine            5.8        110           2
 S serine             12.7        239           3
 T threonine           6.2        116           2
 V valine              4.8         91           2
 W tryptophan          1.2         23           2
 Y tyrosine            1.5         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 106 homolog 
WDR86                 0.027   WD repeat domain 86 
FBXW7                 0.023   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.023   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.023   F-box and WD repeat domain containing 7 isoform 2 [H...
WDR69                 0.019   WD repeat domain 69 
FBXW11                0.018   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.018   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.018   F-box and WD repeat domain containing 11 isoform B [...
TRAF7                 0.017   TNF receptor-associated factor 7 
BTRC                  0.016   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.016   beta-transducin repeat containing protein isoform 1 ...
WDR5                  0.015   WD repeat domain 5 
WDR5                  0.015   WD repeat domain 5 
WDR5B                 0.013   WD repeat domain 5B 
FBXW10                0.011   F-box and WD-40 domain protein 10 
CDRT1                 0.011   CMT1A duplicated region transcript 1 
PAFAH1B1              0.011   platelet-activating factor acetylhydrolase, isoform I...
TBL1XR1               0.011   transducin (beta)-like 1 X-linked receptor 1 
WDR51A                0.010   WD repeat domain 51A isoform 3 
WDR51A                0.010   WD repeat domain 51A isoform 2 
WDR51A                0.010   WD repeat domain 51A isoform 1 
KIF21A                0.010   kinesin family member 21A 
WDR3                  0.009   WD repeat-containing protein 3 
MORG1                 0.009   mitogen-activated protein kinase organizer 1 
MORG1                 0.009   mitogen-activated protein kinase organizer 1 
SNRNP40               0.008   WD repeat domain 57 (U5 snRNP specific) 
KIF21B                0.008   kinesin family member 21B 
SPAG16                0.008   sperm associated antigen 16 isoform 1 
WDR38                 0.008   WD repeat domain 38 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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