Guide to the Human Genome
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Name: ACSS2 Sequence: fasta or formatted (714aa) NCBI GI: 253970489
Description:

acyl-CoA synthetase short-chain family member 2 isoform 2

Referenced in:

Amino Acid Catabolism
Fatty Acid Synthesis

Other entries for this name:
alt prot [701aa] acyl-CoA synthetase short-chain family member 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         44           2
 C cysteine            2.7         19           2
 D aspartate           4.5         32           2
 E glutamate           7.4         53           2
 F phenylalanine       4.2         30           2
 G glycine             8.8         63           2
 H histidine           3.1         22           1
 I isoleucine          5.0         36           1
 K lysine              5.6         40           2
 L leucine             7.6         54           2
 M methionine          2.1         15           1
 N asparagine          2.2         16           1
 P proline             6.3         45           3
 Q glutamine           3.6         26           1
 R arginine            5.2         37           2
 S serine              5.7         41           2
 T threonine           6.2         44           2
 V valine              7.4         53           2
 W tryptophan          2.4         17           2
 Y tyrosine            3.8         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-CoA synthetase short-chain family member 2 iso... 
ACSS2                 0.977   acyl-CoA synthetase short-chain family member 2 isofo...
ACSS1                 0.397   acyl-CoA synthetase short-chain family member 1 [Hom...
ACSS3                 0.228   acyl-CoA synthetase short-chain family member 3 [Hom...
AACS                  0.120   acetoacetyl-CoA synthetase 
ACSM4                 0.110   acyl-CoA synthetase medium-chain family member 4 [H...
ACSM3                 0.107   SA hypertension-associated homolog isoform 1 
ACSM5                 0.105   acyl-CoA synthetase medium-chain family member 5 [Ho...
ACSM1                 0.094   acyl-CoA synthetase medium-chain family member 1 [H...
ACSM2A                0.086   acyl-CoA synthetase medium-chain family member 2A [H...
ACSM2B                0.078   acyl-CoA synthetase medium-chain family member 2B [...
ACSM2B                0.078   acyl-CoA synthetase medium-chain family member 2B [...
LOC100291873          0.075   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
LOC100291873          0.075   PREDICTED: similar to Acyl-coenzyme A synthetase AC...
ACSF3                 0.053   acyl-CoA synthetase family member 3 
ACSF3                 0.053   acyl-CoA synthetase family member 3 
ACSM3                 0.051   SA hypertension-associated homolog isoform 2 
C10orf129             0.035   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
SLC27A1               0.029   solute carrier family 27, member 1 
SLC27A4               0.023   solute carrier family 27 (fatty acid transporter), m...
ACSF2                 0.022   acyl-CoA synthetase family member 2 
SLC27A5               0.022   solute carrier family 27 (fatty acid transporter), m...
SLC27A3               0.018   solute carrier family 27 member 3 
AASDH                 0.015   aminoadipate-semialdehyde dehydrogenase 
SLC27A2               0.014   solute carrier family 27 (fatty acid transporter), ...
SLC27A6               0.014   solute carrier family 27 (fatty acid transporter), m...
SLC27A6               0.014   solute carrier family 27 (fatty acid transporter), m...
NKAP                  0.007   NFKB activating protein 
ACSL4                 0.006   acyl-CoA synthetase long-chain family member 4 isofor...
ACSL4                 0.006   acyl-CoA synthetase long-chain family member 4 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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