TRAF5 1060

Name: TRAF5	Sequence: fasta or formatted (557aa)		NCBI GI: 11321603
Description: TNF receptor-associated factor 5		Referenced in: TNF and Related Signals
Other entries for this name: alt mRNA [557aa] TNF receptor-associated factor 5 alt mRNA [557aa] TNF receptor-associated factor 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 26 1 C cysteine 4.8 27 2 D aspartate 4.8 27 2 E glutamate 8.4 47 3 F phenylalanine 4.7 26 1 G glycine 3.9 22 1 H histidine 4.1 23 1 I isoleucine 4.1 23 2 K lysine 8.4 47 2 L leucine 10.4 58 2 M methionine 1.8 10 1 N asparagine 5.7 32 2 P proline 3.6 20 1 Q glutamine 6.5 36 3 R arginine 4.8 27 2 S serine 6.1 34 3 T threonine 3.1 17 1 V valine 6.5 36 3 W tryptophan 0.5 3 1 Y tyrosine 2.9 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TNF receptor-associated factor 5 TRAF5 1.000 TNF receptor-associated factor 5 TRAF5 1.000 TNF receptor-associated factor 5 TRAF3 0.383 TNF receptor-associated factor 3 isoform 1 TRAF3 0.383 TNF receptor-associated factor 3 isoform 1 TRAF3 0.350 TNF receptor-associated factor 3 isoform 2 TRAF2 0.238 TNF receptor-associated factor 2 TRAF1 0.165 TNF receptor-associated factor 1 TRAF6 0.137 TNF receptor-associated factor 6 TRAF6 0.137 TNF receptor-associated factor 6 TRAF4 0.097 TNF receptor-associated factor 4 PDZRN3 0.045 PDZ domain containing ring finger 3 RNF151 0.044 ring finger protein 151 TRAF7 0.037 TNF receptor-associated factor 7 RNF166 0.028 ring finger protein 166 RNF125 0.026 ring finger protein 125 RNF41 0.021 ring finger protein 41 isoform 1 RNF41 0.021 ring finger protein 41 isoform 1 XAF1 0.020 XIAP associated factor 1 isoform 2 TRIM26 0.019 tripartite motif-containing 26 XAF1 0.018 XIAP associated factor 1 isoform 1 HOOK1 0.018 hook homolog 1 LNX1 0.018 ligand of numb-protein X 1 isoform a ERC1 0.017 RAB6-interacting protein 2 isoform epsilon CCDC39 0.017 coiled-coil domain containing 39 TRIM31 0.017 tripartite motif protein 31 EEA1 0.016 early endosome antigen 1, 162kD MYH11 0.016 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.016 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.016 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.