Guide to the Human Genome
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Name: RNF151 Sequence: fasta or formatted (245aa) NCBI GI: 87241872
Description:

ring finger protein 151

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         21           2
 C cysteine            7.8         19           2
 D aspartate           2.9          7           1
 E glutamate           7.8         19           2
 F phenylalanine       2.0          5           1
 G glycine             6.5         16           3
 H histidine           3.7          9           1
 I isoleucine          2.0          5           1
 K lysine              5.7         14           2
 L leucine            10.2         25           3
 M methionine          0.8          2           1
 N asparagine          4.1         10           1
 P proline             6.5         16           2
 Q glutamine           4.5         11           2
 R arginine           10.2         25           3
 S serine              4.5         11           1
 T threonine           3.7          9           1
 V valine              6.5         16           2
 W tryptophan          1.2          3           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 151 
PDZRN3                0.157   PDZ domain containing ring finger 3 
RNF41                 0.123   ring finger protein 41 isoform 1 
RNF41                 0.123   ring finger protein 41 isoform 1 
TRAF5                 0.101   TNF receptor-associated factor 5 
TRAF5                 0.101   TNF receptor-associated factor 5 
TRAF5                 0.101   TNF receptor-associated factor 5 
TRAF3                 0.093   TNF receptor-associated factor 3 isoform 1 
TRAF3                 0.093   TNF receptor-associated factor 3 isoform 2 
TRAF3                 0.093   TNF receptor-associated factor 3 isoform 1 
TRAF7                 0.089   TNF receptor-associated factor 7 
TRAF4                 0.089   TNF receptor-associated factor 4 
TRAF6                 0.083   TNF receptor-associated factor 6 
TRAF6                 0.083   TNF receptor-associated factor 6 
RNFT1                 0.067   PTD016 protein 
RNFT2                 0.060   transmembrane protein 118 isoform 1 
TRAF2                 0.058   TNF receptor-associated factor 2 
PEX10                 0.054   peroxisome biogenesis factor 10 isoform 1 
PEX10                 0.054   peroxisome biogenesis factor 10 isoform 2 
RNF125                0.054   ring finger protein 125 
RNF138                0.052   ring finger protein 138 isoform 1 
SYVN1                 0.050   synoviolin 1 isoform b 
SYVN1                 0.050   synoviolin 1 isoform a 
RNF8                  0.050   ring finger protein 8 isoform 1 
TRIM39                0.050   tripartite motif-containing 39 isoform 2 
TRIM39                0.050   tripartite motif-containing 39 isoform 1 
LNX1                  0.050   ligand of numb-protein X 1 isoform a 
SIAH1                 0.048   seven in absentia homolog 1 isoform b 
SIAH1                 0.048   seven in absentia homolog 1 isoform a 
LONRF1                0.048   LON peptidase N-terminal domain and ring finger 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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