CNOT4 33120

Name: CNOT4	Sequence: fasta or formatted (572aa)		NCBI GI: 56550059
Description: CCR4-NOT transcription complex, subunit 4 isoform b		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [639aa] CCR4-NOT transcription complex, subunit 4 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 33 3 C cysteine 2.1 12 1 D aspartate 4.5 26 2 E glutamate 5.4 31 3 F phenylalanine 4.5 26 2 G glycine 5.1 29 2 H histidine 2.6 15 1 I isoleucine 3.5 20 1 K lysine 5.8 33 2 L leucine 7.9 45 2 M methionine 1.4 8 1 N asparagine 5.9 34 2 P proline 9.4 54 3 Q glutamine 6.5 37 2 R arginine 3.7 21 1 S serine 12.1 69 3 T threonine 5.6 32 3 V valine 5.1 29 3 W tryptophan 0.7 4 1 Y tyrosine 2.4 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CCR4-NOT transcription complex, subunit 4 isoform b ... CNOT4 0.947 CCR4-NOT transcription complex, subunit 4 isoform a ... LOC100130563 0.139 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.138 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.134 PREDICTED: similar to CNOT4 protein, partial SYNJ1 0.015 synaptojanin 1 isoform d SYNJ1 0.015 synaptojanin 1 isoform a UBN2 0.014 ubinuclein 2 TRIM32 0.013 tripartite motif-containing 32 TRIM32 0.013 tripartite motif-containing 32 NCOA6 0.013 nuclear receptor coactivator 6 FOXN1 0.013 forkhead box N1 ST5 0.013 suppression of tumorigenicity 5 isoform 1 ST5 0.013 suppression of tumorigenicity 5 isoform 1 NEURL1B 0.013 neuralized homolog 1B TRIM26 0.013 tripartite motif-containing 26 HRNBP3 0.012 hexaribonucleotide binding protein 3 COL27A1 0.012 collagen, type XXVII, alpha 1 TRIM47 0.012 tripartite motif-containing 47 MUC6 0.012 mucin 6, gastric EYA1 0.011 eyes absent 1 isoform c SYN2 0.011 synapsin II isoform IIa TRIM72 0.011 tripartite motif-containing 72 RNF166 0.011 ring finger protein 166 TRIM4 0.011 tripartite motif protein TRIM4 isoform alpha TRIM4 0.011 tripartite motif protein TRIM4 isoform beta RHOBTB2 0.011 Rho-related BTB domain containing 2 isoform 3 [Homo... RHOBTB2 0.011 Rho-related BTB domain containing 2 isoform 2 [Homo... RHOBTB2 0.011 Rho-related BTB domain containing 2 isoform 1 [Homo... TRIM10 0.011 tripartite motif-containing 10 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.