CNOT4 33119

Name: CNOT4	Sequence: fasta or formatted (639aa)		NCBI GI: 56550057
Description: CCR4-NOT transcription complex, subunit 4 isoform a		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [572aa] CCR4-NOT transcription complex, subunit 4 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 39 3 C cysteine 1.9 12 1 D aspartate 5.0 32 2 E glutamate 4.5 29 2 F phenylalanine 4.7 30 2 G glycine 4.9 31 2 H histidine 3.0 19 2 I isoleucine 3.4 22 1 K lysine 5.3 34 2 L leucine 8.0 51 2 M methionine 1.3 8 1 N asparagine 5.9 38 2 P proline 11.0 70 3 Q glutamine 6.1 39 2 R arginine 3.8 24 1 S serine 12.5 80 3 T threonine 5.3 34 3 V valine 4.1 26 3 W tryptophan 0.9 6 1 Y tyrosine 2.3 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CCR4-NOT transcription complex, subunit 4 isoform a ... CNOT4 0.838 CCR4-NOT transcription complex, subunit 4 isoform b ... LOC100130563 0.123 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.122 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.119 PREDICTED: similar to CNOT4 protein, partial MAGEC1 0.019 melanoma antigen family C, 1 MUC12 0.015 PREDICTED: mucin 12 SYNJ1 0.013 synaptojanin 1 isoform d SYNJ1 0.013 synaptojanin 1 isoform a NCOA6 0.013 nuclear receptor coactivator 6 MUC12 0.012 PREDICTED: mucin 12, cell surface associated MLL5 0.012 myeloid/lymphoid or mixed-lineage leukemia 5 MLL5 0.012 myeloid/lymphoid or mixed-lineage leukemia 5 UBN2 0.012 ubinuclein 2 TRIM32 0.012 tripartite motif-containing 32 TRIM32 0.012 tripartite motif-containing 32 FOXN1 0.012 forkhead box N1 ST5 0.012 suppression of tumorigenicity 5 isoform 1 ST5 0.012 suppression of tumorigenicity 5 isoform 1 NEURL1B 0.012 neuralized homolog 1B TRIM26 0.012 tripartite motif-containing 26 HRNBP3 0.011 hexaribonucleotide binding protein 3 MUC12 0.011 PREDICTED: mucin 12 COL27A1 0.011 collagen, type XXVII, alpha 1 TRIM47 0.011 tripartite motif-containing 47 MUC6 0.011 mucin 6, gastric LOC100130716 0.010 PREDICTED: similar to mucin 11 LOC100130716 0.010 PREDICTED: similar to Mucin-12 EYA1 0.010 eyes absent 1 isoform c SYN2 0.010 synapsin II isoform IIa Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.