TRIM4 4269

Name: TRIM4	Sequence: fasta or formatted (500aa)		NCBI GI: 14670266
Description: tripartite motif protein TRIM4 isoform alpha		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [474aa] tripartite motif protein TRIM4 isoform beta
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 30 2 C cysteine 3.0 15 1 D aspartate 4.0 20 2 E glutamate 8.2 41 4 F phenylalanine 4.2 21 2 G glycine 4.8 24 3 H histidine 3.2 16 1 I isoleucine 3.4 17 1 K lysine 6.6 33 3 L leucine 10.0 50 3 M methionine 1.8 9 1 N asparagine 3.8 19 1 P proline 6.2 31 2 Q glutamine 4.6 23 2 R arginine 6.6 33 3 S serine 6.6 33 2 T threonine 4.6 23 1 V valine 7.6 38 1 W tryptophan 2.6 13 1 Y tyrosine 2.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif protein TRIM4 isoform alpha TRIM4 0.932 tripartite motif protein TRIM4 isoform beta TRIM11 0.262 tripartite motif-containing 11 TRIM58 0.261 tripartite motif-containing 58 TRIM17 0.250 tripartite motif-containing 17 isoform 1 TRIM17 0.250 tripartite motif-containing 17 isoform 1 TRIM39 0.225 tripartite motif-containing 39 isoform 2 TRIM21 0.220 tripartite motif protein 21 TRIM17 0.219 tripartite motif-containing 17 isoform 2 TRIM39 0.215 tripartite motif-containing 39 isoform 1 TRIM27 0.213 ret finger protein TRIM75 0.213 tripartite motif-containing 75 TRIM7 0.209 tripartite motif-containing 7 isoform 1 TRIM68 0.204 ring finger protein 137 TRIM38 0.192 tripartite motif-containing 38 TRIM60 0.181 ring finger protein 129 TRIM17 0.179 tripartite motif-containing 17 isoform 3 TRIM43 0.176 tripartite motif-containing 43 TRIML1 0.175 tripartite motif family-like 1 TRIM6 0.174 tripartite motif-containing 6 isoform 2 TRIM6 0.174 tripartite motif-containing 6 isoform 1 TRIM10 0.170 tripartite motif-containing 10 isoform 1 LOC653192 0.169 PREDICTED: Tripartite motif-containing protein 43-li... TRIM64 0.157 tripartite motif-containing 64 LOC642446 0.157 PREDICTED: tripartite motif-containing protein 64B-... TRIM5 0.157 tripartite motif protein TRIM5 isoform alpha TRIM34 0.155 tripartite motif protein 34 isoform 1 TRIM34 0.155 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.155 tripartite motif-containing 6 and tripartite motif-c... LOC283116 0.149 PREDICTED: similar to ring finger protein 18 isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.