SYN2 11761

Name: SYN2	Sequence: fasta or formatted (582aa)		NCBI GI: 19924103
Description: synapsin II isoform IIa		Referenced in: Synapses
Other entries for this name: alt prot [478aa] synapsin II isoform IIb
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 55 3 C cysteine 0.9 5 1 D aspartate 4.8 28 1 E glutamate 4.3 25 1 F phenylalanine 4.1 24 2 G glycine 6.2 36 2 H histidine 2.1 12 1 I isoleucine 3.8 22 2 K lysine 5.3 31 2 L leucine 7.2 42 2 M methionine 2.7 16 2 N asparagine 3.1 18 2 P proline 11.7 68 7 Q glutamine 5.8 34 2 R arginine 4.5 26 3 S serine 10.8 63 11 T threonine 4.6 27 2 V valine 5.3 31 3 W tryptophan 0.7 4 1 Y tyrosine 2.6 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synapsin II isoform IIa SYN2 0.785 synapsin II isoform IIb SYN3 0.548 synapsin III isoform IIIg SYN3 0.543 synapsin III isoform IIIa SYN1 0.538 synapsin I isoform Ia SYN1 0.538 synapsin I isoform Ib SYN3 0.474 synapsin III isoform IIIc PRB1 0.037 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.036 proline-rich protein BstNI subfamily 2 PRB1 0.032 proline-rich protein BstNI subfamily 1 isoform 2 pre... PRB1 0.030 proline-rich protein BstNI subfamily 1 isoform 3 pre... SFPQ 0.030 splicing factor proline/glutamine rich (polypyrimidin... FLJ22184 0.028 PREDICTED: hypothetical protein FLJ22184 SPEN 0.027 spen homolog, transcriptional regulator CASKIN1 0.026 CASK interacting protein 1 GLTSCR1 0.026 glioma tumor suppressor candidate region gene 1 [Ho... TAF4 0.026 TBP-associated factor 4 FLJ22184 0.025 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.025 PREDICTED: hypothetical protein LOC80164 PRR12 0.025 proline rich 12 SYNJ1 0.024 synaptojanin 1 isoform d RERE 0.024 atrophin-1 like protein isoform b RERE 0.024 atrophin-1 like protein isoform a RERE 0.024 atrophin-1 like protein isoform a PRB3 0.024 proline-rich protein BstNI subfamily 3 precursor [H... RXRB 0.023 retinoid X receptor, beta PCLO 0.023 piccolo isoform 2 PCLO 0.023 piccolo isoform 1 CRTC1 0.023 mucoepidermoid carcinoma translocated 1 isoform 3 [... CRTC1 0.023 mucoepidermoid carcinoma translocated 1 isoform 1 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.