LOC100130563 20414

Name: LOC100130563	Sequence: fasta or formatted (318aa)		NCBI GI: 239750488
Description: PREDICTED: similar to CNOT4 protein, partial		Not currently referenced in the text
Other entries for this name: alt prot {318aa} PREDICTED: similar to CNOT4 protein, partial alt prot {318aa} PREDICTED: similar to CNOT4 protein, partial
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 18 2 C cysteine 1.9 6 1 D aspartate 3.8 12 2 E glutamate 6.0 19 2 F phenylalanine 4.1 13 3 G glycine 5.7 18 1 H histidine 3.5 11 1 I isoleucine 2.8 9 1 K lysine 5.0 16 1 L leucine 12.3 39 2 M methionine 0.9 3 1 N asparagine 3.5 11 1 P proline 10.1 32 2 Q glutamine 6.6 21 2 R arginine 5.0 16 3 S serine 10.7 34 3 T threonine 4.4 14 2 V valine 5.3 17 2 W tryptophan 0.6 2 1 Y tyrosine 2.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.989 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.981 PREDICTED: similar to CNOT4 protein, partial CNOT4 0.253 CCR4-NOT transcription complex, subunit 4 isoform a ... CNOT4 0.253 CCR4-NOT transcription complex, subunit 4 isoform b ... LOC100131165 0.013 PREDICTED: hypothetical protein CCDC88A 0.013 coiled-coil domain containing 88A isoform 2 CCDC88A 0.013 coiled-coil domain containing 88A isoform 1 SLC45A1 0.013 DNB5 KIAA0319 0.011 KIAA0319 RBM20 0.011 RNA binding motif protein 20 HISPPD2A 0.011 histidine acid phosphatase domain containing 2A iso... HISPPD2A 0.011 histidine acid phosphatase domain containing 2A iso... HISPPD2A 0.011 histidine acid phosphatase domain containing 2A isof... PHLDB1 0.011 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.011 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.011 pleckstrin homology-like domain, family B, member 1 ... ACIN1 0.011 apoptotic chromatin condensation inducer 1 LRRC37A3 0.011 leucine rich repeat containing 37, member A3 NPAS2 0.010 neuronal PAS domain protein 2 SS18 0.010 synovial sarcoma translocation, chromosome 18 isofor... SS18 0.010 synovial sarcoma translocation, chromosome 18 isofor... BIN1 0.010 bridging integrator 1 isoform 5 SCRIB 0.010 scribble isoform a MAST1 0.010 microtubule associated serine/threonine kinase 1 [Ho... C11orf53 0.010 hypothetical protein LOC341032 SEC16A 0.008 SEC16 homolog A LOC100294335 0.008 PREDICTED: similar to c114 SLIT-like testicular pro... LOC100294335 0.008 PREDICTED: similar to c114 SLIT-like testicular pro... BIN1 0.008 bridging integrator 1 isoform 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.