TRIM10 6259

Name: TRIM10	Sequence: fasta or formatted (481aa)		NCBI GI: 157426898
Description: tripartite motif-containing 10 isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [395aa] tripartite motif-containing 10 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 28 3 C cysteine 4.2 20 1 D aspartate 4.4 21 2 E glutamate 10.2 49 2 F phenylalanine 4.8 23 2 G glycine 5.2 25 2 H histidine 2.5 12 1 I isoleucine 4.4 21 1 K lysine 3.7 18 1 L leucine 10.4 50 3 M methionine 1.2 6 1 N asparagine 2.1 10 1 P proline 5.2 25 1 Q glutamine 6.0 29 2 R arginine 8.5 41 1 S serine 6.4 31 2 T threonine 5.6 27 1 V valine 6.4 31 2 W tryptophan 1.5 7 1 Y tyrosine 1.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 10 isoform 1 TRIM10 0.764 tripartite motif-containing 10 isoform 2 TRIM15 0.377 tripartite motif protein 15 TRIM39 0.302 tripartite motif-containing 39 isoform 2 TRIM26 0.290 tripartite motif-containing 26 TRIM39 0.287 tripartite motif-containing 39 isoform 1 TRIM7 0.266 tripartite motif-containing 7 isoform 1 TRIM68 0.264 ring finger protein 137 TRIM27 0.262 ret finger protein TRIM58 0.246 tripartite motif-containing 58 TRIM75 0.226 tripartite motif-containing 75 TRIM38 0.224 tripartite motif-containing 38 TRIM21 0.212 tripartite motif protein 21 TRIM11 0.209 tripartite motif-containing 11 TRIM60 0.196 ring finger protein 129 TRIM4 0.194 tripartite motif protein TRIM4 isoform beta TRIM41 0.188 tripartite motif-containing 41 isoform 1 TRIM4 0.179 tripartite motif protein TRIM4 isoform alpha TRIM6 0.176 tripartite motif-containing 6 isoform 2 TRIM6 0.176 tripartite motif-containing 6 isoform 1 MEFV 0.171 Mediterranean fever protein TRIM17 0.168 tripartite motif-containing 17 isoform 1 TRIM17 0.168 tripartite motif-containing 17 isoform 1 TRIM69 0.167 tripartite motif-containing 69 isoform a TRIM31 0.158 tripartite motif protein 31 TRIM41 0.157 tripartite motif-containing 41 isoform 2 TRIM34 0.154 tripartite motif protein 34 isoform 1 TRIM34 0.154 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.154 tripartite motif-containing 6 and tripartite motif-c... TRIM22 0.154 tripartite motif-containing 22 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.