TRIM72 33129

Name: TRIM72	Sequence: fasta or formatted (477aa)		NCBI GI: 56605981
Description: tripartite motif-containing 72		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 52 2 C cysteine 3.6 17 2 D aspartate 4.2 20 2 E glutamate 9.0 43 2 F phenylalanine 3.4 16 2 G glycine 6.7 32 1 H histidine 3.1 15 1 I isoleucine 1.7 8 2 K lysine 3.8 18 1 L leucine 13.2 63 3 M methionine 1.5 7 1 N asparagine 0.6 3 1 P proline 7.1 34 3 Q glutamine 5.9 28 2 R arginine 7.5 36 2 S serine 5.7 27 3 T threonine 2.1 10 1 V valine 7.5 36 2 W tryptophan 1.0 5 1 Y tyrosine 1.5 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 72 TRIM50 0.264 tripartite motif protein 50A TRIM7 0.190 tripartite motif-containing 7 isoform 1 TRIM62 0.182 tripartite motif-containing 62 TRIM21 0.177 tripartite motif protein 21 TRIM58 0.176 tripartite motif-containing 58 TRIM27 0.174 ret finger protein TRIM39 0.173 tripartite motif-containing 39 isoform 2 TRIM39 0.172 tripartite motif-containing 39 isoform 1 TRIM69 0.166 tripartite motif-containing 69 isoform a TRIM11 0.166 tripartite motif-containing 11 TRIM17 0.152 tripartite motif-containing 17 isoform 1 TRIM17 0.152 tripartite motif-containing 17 isoform 1 TRIM68 0.151 ring finger protein 137 TRIM60 0.148 ring finger protein 129 TRIM10 0.146 tripartite motif-containing 10 isoform 1 TRIM75 0.140 tripartite motif-containing 75 TRIM6 0.140 tripartite motif-containing 6 isoform 2 TRIM6 0.140 tripartite motif-containing 6 isoform 1 TRIM17 0.134 tripartite motif-containing 17 isoform 2 TRIM41 0.133 tripartite motif-containing 41 isoform 1 TRIM38 0.130 tripartite motif-containing 38 TRIM5 0.129 tripartite motif protein TRIM5 isoform alpha TRIM4 0.127 tripartite motif protein TRIM4 isoform beta TRIML1 0.126 tripartite motif family-like 1 TRIM4 0.121 tripartite motif protein TRIM4 isoform alpha TRIM35 0.117 tripartite motif-containing 35 isoform 2 TRIM22 0.116 tripartite motif-containing 22 TRIM10 0.116 tripartite motif-containing 10 isoform 2 TRIM69 0.112 tripartite motif-containing 69 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.