TRIM4 4993

Name: TRIM4	Sequence: fasta or formatted (474aa)		NCBI GI: 15011941
Description: tripartite motif protein TRIM4 isoform beta		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [500aa] tripartite motif protein TRIM4 isoform alpha
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 30 2 C cysteine 3.2 15 1 D aspartate 3.8 18 2 E glutamate 8.2 39 4 F phenylalanine 4.2 20 2 G glycine 4.9 23 3 H histidine 3.0 14 1 I isoleucine 3.2 15 1 K lysine 6.5 31 3 L leucine 9.7 46 2 M methionine 1.9 9 1 N asparagine 3.8 18 1 P proline 6.5 31 2 Q glutamine 4.6 22 2 R arginine 6.3 30 3 S serine 6.8 32 2 T threonine 4.6 22 1 V valine 7.8 37 1 W tryptophan 2.5 12 1 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif protein TRIM4 isoform beta TRIM4 0.985 tripartite motif protein TRIM4 isoform alpha TRIM11 0.292 tripartite motif-containing 11 TRIM58 0.287 tripartite motif-containing 58 TRIM17 0.277 tripartite motif-containing 17 isoform 1 TRIM17 0.277 tripartite motif-containing 17 isoform 1 TRIM39 0.252 tripartite motif-containing 39 isoform 2 TRIM21 0.246 tripartite motif protein 21 TRIM17 0.245 tripartite motif-containing 17 isoform 2 TRIM39 0.242 tripartite motif-containing 39 isoform 1 TRIM27 0.236 ret finger protein TRIM75 0.235 tripartite motif-containing 75 TRIM7 0.233 tripartite motif-containing 7 isoform 1 TRIM68 0.227 ring finger protein 137 TRIM38 0.218 tripartite motif-containing 38 TRIM17 0.202 tripartite motif-containing 17 isoform 3 TRIM43 0.201 tripartite motif-containing 43 TRIM60 0.200 ring finger protein 129 TRIM6 0.197 tripartite motif-containing 6 isoform 2 TRIM6 0.197 tripartite motif-containing 6 isoform 1 TRIML1 0.197 tripartite motif family-like 1 TRIM10 0.194 tripartite motif-containing 10 isoform 1 LOC653192 0.193 PREDICTED: Tripartite motif-containing protein 43-li... TRIM64 0.181 tripartite motif-containing 64 LOC642446 0.181 PREDICTED: tripartite motif-containing protein 64B-... TRIM5 0.178 tripartite motif protein TRIM5 isoform alpha TRIM34 0.175 tripartite motif protein 34 isoform 1 TRIM34 0.175 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.175 tripartite motif-containing 6 and tripartite motif-c... LOC283116 0.172 PREDICTED: similar to ring finger protein 18 isofor... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.