| Name: LOC100130563 | Sequence: fasta or formatted (318aa) | NCBI GI: 239744787 | |
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Description: PREDICTED: similar to CNOT4 protein, partial
| Not currently referenced in the text | ||
Other entries for this name:
alt prot {318aa} PREDICTED: similar to CNOT4 protein, partial alt prot {318aa} PREDICTED: similar to CNOT4 protein, partial | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.7 18 2 C cysteine 1.9 6 1 D aspartate 3.8 12 2 E glutamate 6.0 19 2 F phenylalanine 4.1 13 3 G glycine 5.7 18 1 H histidine 3.5 11 1 I isoleucine 2.8 9 1 K lysine 5.0 16 1 L leucine 11.9 38 2 M methionine 0.9 3 1 N asparagine 3.5 11 1 P proline 10.1 32 2 Q glutamine 6.9 22 2 R arginine 4.7 15 3 S serine 11.0 35 3 T threonine 4.4 14 2 V valine 5.3 17 2 W tryptophan 0.6 2 1 Y tyrosine 2.2 7 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.989 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.973 PREDICTED: similar to CNOT4 protein, partial CNOT4 0.256 CCR4-NOT transcription complex, subunit 4 isoform a ... CNOT4 0.256 CCR4-NOT transcription complex, subunit 4 isoform b ... MAST1 0.016 microtubule associated serine/threonine kinase 1 [Ho... RBM20 0.014 RNA binding motif protein 20 WIPF3 0.013 WAS/WASL interacting protein family, member 3 [Homo... LOC100131165 0.013 PREDICTED: hypothetical protein CCDC88A 0.013 coiled-coil domain containing 88A isoform 2 CCDC88A 0.013 coiled-coil domain containing 88A isoform 1 SLC45A1 0.013 DNB5 LRRC37A3 0.013 leucine rich repeat containing 37, member A3 LOC100288229 0.011 PREDICTED: hypothetical protein XP_002343606 HISPPD2A 0.011 histidine acid phosphatase domain containing 2A iso... HISPPD2A 0.011 histidine acid phosphatase domain containing 2A iso... HISPPD2A 0.011 histidine acid phosphatase domain containing 2A isof... ACIN1 0.011 apoptotic chromatin condensation inducer 1 AUTS2 0.011 autism susceptibility candidate 2 isoform 2 AUTS2 0.011 autism susceptibility candidate 2 isoform 1 DAB2 0.011 disabled homolog 2 SF3B4 0.011 splicing factor 3b, subunit 4 PLEKHA4 0.011 pleckstrin homology domain containing family A memb... LOC100294335 0.011 PREDICTED: similar to c114 SLIT-like testicular pro... LOC100294335 0.011 PREDICTED: similar to c114 SLIT-like testicular pro... LRRC37A2 0.011 c114 SLIT-like testicular protein LRRC37A 0.011 leucine rich repeat containing 37A USHBP1 0.011 Usher syndrome 1C binding protein 1 SS18 0.010 synovial sarcoma translocation, chromosome 18 isofor... SS18 0.010 synovial sarcoma translocation, chromosome 18 isofor...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
