| Name: LOC100130563 | Sequence: fasta or formatted (318aa) | NCBI GI: 239755967 | |
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Description: PREDICTED: similar to CNOT4 protein, partial
| Not currently referenced in the text | ||
Other entries for this name:
alt prot {318aa} PREDICTED: similar to CNOT4 protein, partial alt prot {318aa} PREDICTED: similar to CNOT4 protein, partial | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.7 18 2 C cysteine 1.6 5 1 D aspartate 3.8 12 2 E glutamate 6.0 19 2 F phenylalanine 4.1 13 3 G glycine 5.3 17 1 H histidine 3.5 11 1 I isoleucine 2.8 9 1 K lysine 5.0 16 1 L leucine 12.3 39 2 M methionine 0.9 3 1 N asparagine 3.5 11 1 P proline 9.7 31 2 Q glutamine 6.6 21 2 R arginine 4.7 15 3 S serine 11.6 37 3 T threonine 4.4 14 2 V valine 5.3 17 2 W tryptophan 0.6 2 1 X unknown 0.3 1 1 Y tyrosine 2.2 7 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.990 PREDICTED: similar to CNOT4 protein, partial LOC100130563 0.982 PREDICTED: similar to CNOT4 protein, partial CNOT4 0.249 CCR4-NOT transcription complex, subunit 4 isoform a ... CNOT4 0.249 CCR4-NOT transcription complex, subunit 4 isoform b ... SLC45A1 0.016 DNB5 LOC100131165 0.013 PREDICTED: hypothetical protein CCDC88A 0.013 coiled-coil domain containing 88A isoform 2 CCDC88A 0.013 coiled-coil domain containing 88A isoform 1 RBM20 0.013 RNA binding motif protein 20 ACIN1 0.011 apoptotic chromatin condensation inducer 1 NPAS2 0.011 neuronal PAS domain protein 2 MAST1 0.011 microtubule associated serine/threonine kinase 1 [Ho... SYNPO 0.010 synaptopodin isoform B SYNPO 0.010 synaptopodin isoform A C11orf53 0.010 hypothetical protein LOC341032 TMEM120A 0.010 transmembrane protein 120A LRRC37A3 0.010 leucine rich repeat containing 37, member A3 PHLDB1 0.008 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.008 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.008 pleckstrin homology-like domain, family B, member 1 ... UTP14A 0.008 UTP14, U3 small nucleolar ribonucleoprotein, homolog... KIAA0319 0.008 KIAA0319 EGR1 0.008 early growth response 1 ROR1 0.008 receptor tyrosine kinase-like orphan receptor 1 iso... LOC100294335 0.008 PREDICTED: similar to c114 SLIT-like testicular pro... LOC100294335 0.008 PREDICTED: similar to c114 SLIT-like testicular pro... DUSP16 0.008 dual specificity phosphatase 16 RREB1 0.008 ras responsive element binding protein 1 isoform 2 [... RREB1 0.008 ras responsive element binding protein 1 isoform 1 [...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
