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Search of human proteins with 56550057
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56550057 CCR4-NOT transcription complex, subunit 4 isoform a
[Homo sapiens]
(639 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56550057 CCR4-NOT transcription complex, subunit 4 isoform a ... 1321 0.0
gi|56550059 CCR4-NOT transcription complex, subunit 4 isoform b ... 1111 0.0
gi|239744787 PREDICTED: similar to CNOT4 protein, partial [Homo ... 185 1e-46
gi|239750488 PREDICTED: similar to CNOT4 protein, partial [Homo ... 183 4e-46
gi|239755967 PREDICTED: similar to CNOT4 protein, partial [Homo ... 179 5e-45
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 50 8e-06
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 44 5e-04
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 42 0.002
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 42 0.002
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 42 0.002
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 41 0.003
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 41 0.003
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 41 0.003
gi|236459851 ubinuclein 2 [Homo sapiens] 41 0.004
gi|153791514 tripartite motif-containing 32 [Homo sapiens] 40 0.005
gi|153792582 tripartite motif-containing 32 [Homo sapiens] 40 0.005
gi|18201913 forkhead box N1 [Homo sapiens] 40 0.005
gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 40 0.005
gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo sapi... 40 0.005
gi|217416388 neuralized homolog 1B [Homo sapiens] 40 0.007
gi|4508005 tripartite motif-containing 26 [Homo sapiens] 40 0.009
gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens] 39 0.011
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 39 0.015
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 39 0.015
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 39 0.015
gi|151301154 mucin 6, gastric [Homo sapiens] 39 0.019
gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens] 38 0.025
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens] 38 0.025
gi|26667219 eyes absent 1 isoform c [Homo sapiens] 38 0.025
gi|19924103 synapsin II isoform IIa [Homo sapiens] 38 0.025
>gi|56550057 CCR4-NOT transcription complex, subunit 4 isoform a
[Homo sapiens]
Length = 639
Score = 1321 bits (3419), Expect = 0.0
Identities = 639/639 (100%), Positives = 639/639 (100%)
Query: 1 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY 60
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
Sbjct: 1 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY 60
Query: 61 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL 120
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
Sbjct: 61 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL 120
Query: 121 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV 180
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
Sbjct: 121 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV 180
Query: 181 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL 240
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
Sbjct: 181 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL 240
Query: 241 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP 300
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP
Sbjct: 241 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP 300
Query: 301 PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD 360
PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD
Sbjct: 301 PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD 360
Query: 361 WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL
Sbjct: 361 WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
Query: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR 480
SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR
Sbjct: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR 480
Query: 481 AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAG 540
AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAG
Sbjct: 481 AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAG 540
Query: 541 IPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPY 600
IPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPY
Sbjct: 541 IPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPY 600
Query: 601 PPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH 639
PPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
Sbjct: 601 PPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH 639
>gi|56550059 CCR4-NOT transcription complex, subunit 4 isoform b
[Homo sapiens]
Length = 572
Score = 1111 bits (2874), Expect = 0.0
Identities = 540/540 (100%), Positives = 540/540 (100%)
Query: 1 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY 60
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
Sbjct: 1 MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY 60
Query: 61 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL 120
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
Sbjct: 61 PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL 120
Query: 121 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV 180
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
Sbjct: 121 ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV 180
Query: 181 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL 240
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
Sbjct: 181 VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL 240
Query: 241 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP 300
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP
Sbjct: 241 LQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP 300
Query: 301 PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD 360
PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD
Sbjct: 301 PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD 360
Query: 361 WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL
Sbjct: 361 WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
Query: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR 480
SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR
Sbjct: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR 480
Query: 481 AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAG 540
AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAG
Sbjct: 481 AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAG 540
>gi|239744787 PREDICTED: similar to CNOT4 protein, partial [Homo
sapiens]
Length = 318
Score = 185 bits (470), Expect = 1e-46
Identities = 125/266 (46%), Positives = 141/266 (53%), Gaps = 59/266 (22%)
Query: 223 FTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSI 282
FTKE+ A +HQEYEQ+LLQE Y LNPN+L LS G D+NK ++ PLQSP
Sbjct: 106 FTKEKSLAAEHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSP---------- 155
Query: 283 GNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342
SN D PSPP GL KS+PVIP+ SS HS + P EGA ESQ LF DN
Sbjct: 156 -------TTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDN----- 203
Query: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402
P+ P+ QSL T P+ FG S+QPED LGF
Sbjct: 204 ---------PALPKHLLH-------QSLGTVILKPLD----------FGFSQQPEDVLGF 237
Query: 403 DPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSL 462
D FD KALA L E EL Q SSSH T A GPGS PAA TNA+S
Sbjct: 238 DVFDAVWKALAGLTEMELPG-----------QASSSHPTAALGPGSELQPPAAPTNAHSF 286
Query: 463 NSTFSVLPQRFPQFQQHRAVYNSFSF 488
+ST VLP R PQFQQH VY SF F
Sbjct: 287 HSTPPVLPPRPPQFQQHLTVYESFFF 312
Score = 100 bits (249), Expect = 4e-21
Identities = 56/107 (52%), Positives = 71/107 (66%), Gaps = 11/107 (10%)
Query: 42 WHRIRTDENGLCPACRKPYPEDPAVYKPLSQEELQRIKNEKKQKQNERK-QKISENRKHL 100
WH+I T+E LCP RKP PE +VY PLSQE LQ+IK+ + +++ RK QKIS++
Sbjct: 3 WHQIHTEETVLCPVNRKPCPEGSSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKS---- 58
Query: 101 ASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNST 147
+LV V GLSQ LADP VLK PEYFGK +I +V IN+ST
Sbjct: 59 ------CLSLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSST 99
Score = 32.0 bits (71), Expect = 1.8
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 562 KSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFR 621
K+L LTEM+ P A S +H +A L P P+N SFHS PP R
Sbjct: 245 KALAGLTEMELPGQA-SSSHPTAALGPGSELQ-----PPAAPTNAHSFHSTPPVLPP--R 296
Query: 622 PP 623
PP
Sbjct: 297 PP 298
>gi|239750488 PREDICTED: similar to CNOT4 protein, partial [Homo
sapiens]
Length = 318
Score = 183 bits (465), Expect = 4e-46
Identities = 124/266 (46%), Positives = 141/266 (53%), Gaps = 59/266 (22%)
Query: 223 FTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSI 282
FTKE+ A +HQEYEQ+LLQE Y LNPN+L LS G D+NK ++ PLQSP
Sbjct: 106 FTKEKSLAAEHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSP---------- 155
Query: 283 GNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342
SN D PSPP GL KS+PVIP+ SS HS + P EGA ESQ LF DN
Sbjct: 156 -------TTSNRDRPSPPTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDN----- 203
Query: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402
P+ P+ QSL T P+ FG S+QPED LGF
Sbjct: 204 ---------PALPKHLLH-------QSLGTVILKPLD----------FGFSQQPEDVLGF 237
Query: 403 DPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSL 462
D FD KALA L E EL Q SSSH T A GPGS PAA TNA+S
Sbjct: 238 DVFDAVWKALAGLTEMELPG-----------QASSSHPTAALGPGSELQPPAAPTNAHSF 286
Query: 463 NSTFSVLPQRFPQFQQHRAVYNSFSF 488
+ST VLP R P+FQQH VY SF F
Sbjct: 287 HSTPPVLPLRPPRFQQHLTVYESFFF 312
Score = 103 bits (257), Expect = 5e-22
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 11/107 (10%)
Query: 42 WHRIRTDENGLCPACRKPYPEDPAVYKPLSQEELQRIKNEKKQKQNERK-QKISENRKHL 100
WH+I T+E LCP RKP PE P+VY PLSQE LQ+IK+ + +++ RK QKIS++
Sbjct: 3 WHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKS---- 58
Query: 101 ASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNST 147
+LV V GLSQ LADP VLK PEYFGK +I +V IN+ST
Sbjct: 59 ------CLSLVCVAGLSQCLADPVVLKGPEYFGKLDEISRVAINSST 99
Score = 32.3 bits (72), Expect = 1.4
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 562 KSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFR 621
K+L LTEM+ P A S +H +A L P P+N SFHS PP R
Sbjct: 245 KALAGLTEMELPGQA-SSSHPTAALGPGSELQ-----PPAAPTNAHSFHSTPP--VLPLR 296
Query: 622 PP 623
PP
Sbjct: 297 PP 298
>gi|239755967 PREDICTED: similar to CNOT4 protein, partial [Homo
sapiens]
Length = 318
Score = 179 bits (455), Expect = 5e-45
Identities = 123/266 (46%), Positives = 139/266 (52%), Gaps = 59/266 (22%)
Query: 223 FTKEEMQAGKHQEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSI 282
FTKE+ A +HQEYEQ+LLQE Y LNPN+L LS G D+NK ++ PLQSP
Sbjct: 106 FTKEKSLAAEHQEYEQQLLQEFYTLNPNYLHLSMGLDDRNKIQMIPLQSP---------- 155
Query: 283 GNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342
SN D PSP GL KS+PVIP+ SS HS + P EGA ESQ LF DN
Sbjct: 156 -------TTSNRDRPSPSTGLPKSSPVIPVRSSGHSEQLPSEGAGAESQLLFLDN----- 203
Query: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402
P+ P+ QSL T P+ FG S+QPED LGF
Sbjct: 204 ---------PALPKHLLH-------QSLGTVILKPLD----------FGFSQQPEDVLGF 237
Query: 403 DPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSL 462
D FD KALA L E EL Q SSSH T A GPGS PAA TNA+S
Sbjct: 238 DVFDAVWKALAGLTEMELPG-----------QASSSHPTAALGPGSELQPPAAPTNAHSF 286
Query: 463 NSTFSVLPQRFPQFQQHRAVYNSFSF 488
+ST VLP R P FQQH VY SF F
Sbjct: 287 HSTPPVLPLRPPXFQQHLTVYESFFF 312
Score = 104 bits (259), Expect = 3e-22
Identities = 57/107 (53%), Positives = 72/107 (67%), Gaps = 11/107 (10%)
Query: 42 WHRIRTDENGLCPACRKPYPEDPAVYKPLSQEELQRIKNEKKQKQNERK-QKISENRKHL 100
WH+I T+E LCP RKP PE P+VY PLSQE LQ+IK+ + +++ RK QKIS++
Sbjct: 3 WHQIHTEETVLCPVNRKPCPEGPSVYNPLSQEALQKIKDVRDRRRKSRKYQKISKS---- 58
Query: 101 ASVRVVQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNST 147
+LV V GLSQ LADP VLK PEYFGK +I +V IN+ST
Sbjct: 59 ------CLSLVCVAGLSQSLADPVVLKGPEYFGKLDEISRVAINSST 99
Score = 32.3 bits (72), Expect = 1.4
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 562 KSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFR 621
K+L LTEM+ P A S +H +A L P P+N SFHS PP R
Sbjct: 245 KALAGLTEMELPGQA-SSSHPTAALGPGSELQ-----PPAAPTNAHSFHSTPP--VLPLR 296
Query: 622 PP 623
PP
Sbjct: 297 PP 298
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 49.7 bits (117), Expect = 8e-06
Identities = 99/379 (26%), Positives = 143/379 (37%), Gaps = 38/379 (10%)
Query: 270 QSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSAR--SPFEGAV 327
QSP+ P S + Q S T S G +S IP+SSS+ S+ S F+ +
Sbjct: 440 QSPLQIPVSSSFSYTLLSLFQSSPERTHSTFEGFPQSPLQIPVSSSSSSSTLLSLFQSSP 499
Query: 328 TESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVS--SSTDWQ 385
+QS F + P IP P ++ P+ PE + + P S D
Sbjct: 500 ECTQSTFEGFPQSPLQIPQSPPEGENTHSPLQIVPSLPEWEDSLSPHYFPQSPPQGEDSL 559
Query: 386 AAFGFGSS-KQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAK 444
+ F S Q ED L F + + E LS P SP ++S S +
Sbjct: 560 SPHYFPQSPPQGEDSLSPHYFPQSPQG-----EDSLSPHYFPQ-SPPQGEDSMSPLYFPQ 613
Query: 445 GPGSGFLHPAAATNANSL--NSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPR 502
P G ++ + S+ +ST S LPQ FP+ Q + P Q+ + + P
Sbjct: 614 SPLQGEEFQSSLQSPVSICSSSTPSSLPQSFPESSQ-----SPPEGPVQSPLHSPQSPPE 668
Query: 503 NSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIPASSGNSLDSLQ-DDNPPHWL 561
MH S S P+ L + + P +SL SL +PP W
Sbjct: 669 G--MH--------SQSPLQSPESAPEGEDSLSPLQIPQSPLEGEDSLSSLHFPQSPPEWE 718
Query: 562 KSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPG-FQTAF 620
SL L P P + + + + +S + P S P S SPP G Q+
Sbjct: 719 DSLSPL---HFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSFPESPQSPPEGPAQSPL 775
Query: 621 RPP-----SKTPTDLLQSS 634
+ P S T LLQSS
Sbjct: 776 QRPVSSFFSYTLASLLQSS 794
Score = 42.7 bits (99), Expect = 0.001
Identities = 111/449 (24%), Positives = 173/449 (38%), Gaps = 97/449 (21%)
Query: 261 KNKNKVTPLQSPIDKP--SDSLS-IGNGDNSQQISNSDTP-----SPPPGLSKSNPV-IP 311
+ K+ +PLQ P P D+ S + N +S + +S +P SPP G +P+ P
Sbjct: 72 EGKDSQSPLQIPQSSPEGDDTQSPLQNSQSSPEGKDSLSPLEISQSPPEGEDVQSPLQNP 131
Query: 312 IS------------SSNHSARSPFEG----------AVTESQSLFSDNFRHPNPIPSGLP 349
S SS S +SPFEG + S +L S P S
Sbjct: 132 ASSFFSSALLSIFQSSPESTQSPFEGFPQSVLQIPVSAASSSTLVSIFQSSPESTQSPFE 191
Query: 350 PFPSSP-----------QTSSDWPTAPE-PQSLF-----TSETIPVSSSTDWQAAFGFGS 392
FP SP S + ++PE QS F + IPVS S+ F S
Sbjct: 192 GFPQSPLQIPVSRSFSSTLLSIFQSSPERTQSTFEGFAQSPLQIPVSPSSSSTLLSLFQS 251
Query: 393 SKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPT--SLQNSSSHTT--TAKG-PG 447
+ T+ + L + PS S T SL SS T T +G P
Sbjct: 252 FSER-----------TQSTFEGFAQSSLQIPVSPSFSSTLVSLFQSSPERTQSTFEGFPQ 300
Query: 448 SGFLHPAAATNANSLNSTFSVLPQR-------FPQFQQHRAVYNSFS--------FPGQA 492
S P +++++++L S F P+R FPQ + +SFS ++
Sbjct: 301 SPLQIPVSSSSSSTLLSLFQSSPERTHSTFEGFPQSLLQIPMTSSFSSTLLSIFQSSPES 360
Query: 493 ARYPWMAFPRNSIMHLNHTANPTSNSNFLDL--NLPPQHNTGLGGIPVAGI----PASSG 546
A+ + FP++ L +P+ +S L L + P + ++ G P + + +S
Sbjct: 361 AQSTFEGFPQSP---LQIPGSPSFSSTLLSLFQSSPERTHSTFEGFPQSPLQIPMTSSFS 417
Query: 547 NSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPFS-TQIPLHRASWNPYPPPSN 605
++L S+ +P A + +G +P Q S+ FS T + L ++S P S
Sbjct: 418 STLLSILQSSPE------SAQSAFEGFPQSPLQIPVSSSFSYTLLSLFQSS--PERTHST 469
Query: 606 PSSFHSPPPGFQTAFRPPSKTPTDLLQSS 634
F P + S T L QSS
Sbjct: 470 FEGFPQSPLQIPVSSSSSSSTLLSLFQSS 498
Score = 37.0 bits (84), Expect = 0.056
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 33/161 (20%)
Query: 268 PLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAV 327
P QSP+ +P S + Q S+ SPP G A+SP + V
Sbjct: 770 PAQSPLQRPVSSFFSYTLASLLQSSHESPQSPPEG---------------PAQSPLQSPV 814
Query: 328 TESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAA 387
+ S S + +P+ S FPSS +S + P+S S I SSST
Sbjct: 815 SSFPSSTSSSLSQSSPVSS----FPSSTSSSL---SKSSPESPLQSPVISFSSST----- 862
Query: 388 FGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSL 428
S P + P D + L+E + S+ D SL
Sbjct: 863 -----SLSPFSEESSSPVDEYTSSSDTLLESD-SLTDSESL 897
Score = 32.7 bits (73), Expect = 1.1
Identities = 66/267 (24%), Positives = 102/267 (38%), Gaps = 49/267 (18%)
Query: 247 LNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGL--- 303
L+P++ S + + + + QSP+ S+ + I +S TPS P
Sbjct: 590 LSPHYFPQSPPQGEDSMSPLYFPQSPLQGEEFQSSL---QSPVSICSSSTPSSLPQSFPE 646
Query: 304 -SKSNPVIPISSSNHSARSPFEGAVTES--QSLFSDNFRHPNPIPSGLPPFPSS------ 354
S+S P P+ S HS +SP EG ++S QS S + P +P P
Sbjct: 647 SSQSPPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAPEGEDSLSPLQIPQSPLEGEDSLS 706
Query: 355 ----PQTSSDW-------------PTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQ-P 396
PQ+ +W P + QS S SSST F S Q P
Sbjct: 707 SLHFPQSPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSFPESPQSP 766
Query: 397 EDDLGFDPF-----DVTRKALADLI----EKELSVQDQPSLSP-----TSLQNSSSHTTT 442
+ P LA L+ E S + P+ SP +S +S+S + +
Sbjct: 767 PEGPAQSPLQRPVSSFFSYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLS 826
Query: 443 AKGPGSGFLHPAAATNANSLNSTFSVL 469
P S F P++ +++ S +S S L
Sbjct: 827 QSSPVSSF--PSSTSSSLSKSSPESPL 851
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 43.9 bits (102), Expect = 5e-04
Identities = 87/378 (23%), Positives = 129/378 (34%), Gaps = 41/378 (10%)
Query: 271 SPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSN----PVIPISSSNHSARSPFEGA 326
SP S +S + + Q ++ T + P + S P SS + + G+
Sbjct: 4095 SPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPGS 4154
Query: 327 VTESQSLFSDNFRHPNPIPSGLPPFPSSPQTS----SDWPTAPEPQSLFTSETIPVSSST 382
T S H +P + P TS + PT SL T+ T S+ST
Sbjct: 4155 TTASSLGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTST 4214
Query: 383 DWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTT 442
Q S D P T A +E + +PS +PT+ S+S TT
Sbjct: 4215 GLQEESTTFQSWPSSSDTTPSPPSTT----AVPVEVSTTYHSRPSSTPTT-HFSASSTTL 4269
Query: 443 AKGPGSGFLHPAAATNANSL---NSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMA 499
+ S +H + +L S SVL + + PG
Sbjct: 4270 GRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTT---AG 4326
Query: 500 FPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIPASSGNSLDSLQDDNPPH 559
S + +P D L P T SSG S +S + P
Sbjct: 4327 LSEKSTTFYSSPRSP-------DTTLSPASTT------------SSGVSEESTTSHSRPG 4367
Query: 560 WLKS--LQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQ 617
+ + + T M G S S HS+P ST L S ++FHS P +
Sbjct: 4368 SMHTTAFPSSTTMPGVSQE-STASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTE 4426
Query: 618 TAFRPPSKTPTDLLQSST 635
T P + T + LL++ST
Sbjct: 4427 TTLLPDNTTASGLLEAST 4444
Score = 43.1 bits (100), Expect = 8e-04
Identities = 87/398 (21%), Positives = 132/398 (33%), Gaps = 61/398 (15%)
Query: 255 STGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISS 314
S GS D + + S + S + G + +T + L S PV +
Sbjct: 4393 SPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTLLPDNTTASGL-LEASTPVHSSTG 4451
Query: 315 SNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLF--- 371
S H+ SP + +S F S P + P P S F
Sbjct: 4452 SPHTTLSPAGSTTRQGEST----------------TFQSWPNSKDTTPAPPTTTSAFVEL 4495
Query: 372 --TSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVT-------RKALADLIEKELSV 422
TS P S+ T +A + E T R + L+E+ +
Sbjct: 4496 STTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTY 4555
Query: 423 QDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAV 482
P + T + S+TT+ +G S H + +S ST S L + +
Sbjct: 4556 HSSPGSTQT-MHFPESNTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYH----- 4609
Query: 483 YNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIP 542
S PG A FP +S + S+S+ Q TG +P
Sbjct: 4610 ----SSPGSTAT---THFPDSSTTSGRSEESTASHSS--------QDATG-----TIVLP 4649
Query: 543 ASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAP-----SQTHHSAPFSTQIPLHRASW 597
A S S+ + P S++ T + G + P S T HS+P ST AS
Sbjct: 4650 ARSTTSVLLGESTTSPISSGSMET-TALPGSTTTPGLSEKSTTFHSSPSSTPTTHFSASS 4708
Query: 598 NPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++ HS P T P T + L++ ST
Sbjct: 4709 TTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEEST 4746
Score = 42.7 bits (99), Expect = 0.001
Identities = 89/398 (22%), Positives = 131/398 (32%), Gaps = 61/398 (15%)
Query: 255 STGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISS 314
S GS D + + S + S + G G + +T + L S PV +
Sbjct: 3310 SPGSTDTTLSPGSTTASSLGPESTTFHSGPGSTETTLLPDNTTASGL-LEASTPVHSSTG 3368
Query: 315 SNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLF--- 371
S H+ SP + +S F S P + P P S F
Sbjct: 3369 SPHTTLSPAGSTTRQGEST----------------TFQSWPNSKDTTPAPPTTTSAFVEL 3412
Query: 372 --TSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVT-------RKALADLIEKELSV 422
TS P S+ T +A + E T R + L+E+ +
Sbjct: 3413 STTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTY 3472
Query: 423 QDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAV 482
P + T + S TT+ +G S H + +S ST S L + +
Sbjct: 3473 HSSPGSTQT-MHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYH----- 3526
Query: 483 YNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIP 542
S PG A FP +S + S+S+ Q TG +P
Sbjct: 3527 ----SSPGSTAT---THFPDSSTTSGRSEESTASHSS--------QDATG-----TIVLP 3566
Query: 543 ASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAP-----SQTHHSAPFSTQIPLHRASW 597
A S S+ + P S++ T + G + P S T HS+P S L AS
Sbjct: 3567 ARSTTSVLLGESTTSPISSGSMET-TALPGSTTTPGLSEKSTTFHSSPRSPATTLSPAST 3625
Query: 598 NPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++ HS P T P S T L + ST
Sbjct: 3626 TSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHST 3663
Score = 42.0 bits (97), Expect = 0.002
Identities = 90/399 (22%), Positives = 143/399 (35%), Gaps = 42/399 (10%)
Query: 267 TPLQSPIDKPSDSLSIGNGDNSQQISNS--------DTPSPPPGLSKSNPVIPISSSNHS 318
TP+ S P +LS Q S + DT PP + ++ + +S+++H
Sbjct: 1804 TPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPP--TTTSAFVELSTTSHG 1861
Query: 319 ARSP-----FEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSS--DWPTA--PEPQS 369
+ S F + T H +P+ + P P+ TS + TA P S
Sbjct: 1862 SPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTAYHSSPGS 1921
Query: 370 LFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLS 429
T P SS+ ++ S + P + L+E+ S P +
Sbjct: 1922 TQTMH-FPESSTASGRSEESRTSHSSTTHTISSPP-----STTSALVEEPTSYHSSPGST 1975
Query: 430 PTSLQNSSSHTTTAKGPGSGFLHP---AAATNANSLNSTFSVLPQRFPQFQQHRAVYNSF 486
T+ SS TT+ + S H A T ST SVL +
Sbjct: 1976 ATTHFPDSS-TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETT 2034
Query: 487 SFPGQAARYPWMAFPRNSIMHLNH-----TANPTSNSNFLDLNLPPQHNTGLGGIPVAGI 541
+ PG P ++ +++ H + T +P S ++ ++ G
Sbjct: 2035 ALPGSTTT-PGLS-EKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAF 2092
Query: 542 PASS---GNSLDSLQDDNPPHWLKS--LQALTEMDGPSAAPSQTHHSAPFSTQIPLHRAS 596
P S+ G S S + P + L A T GPS S T HS+P ST L S
Sbjct: 2093 PDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQE-STTSHSSPGSTDTALSPGS 2151
Query: 597 WNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++FHS P T P S T + ++++ST
Sbjct: 2152 TTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEAST 2190
Score = 41.2 bits (95), Expect = 0.003
Identities = 86/378 (22%), Positives = 127/378 (33%), Gaps = 41/378 (10%)
Query: 271 SPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSN----PVIPISSSNHSARSPFEGA 326
SP S +S + + Q ++ T + P + S+ P SS + + G+
Sbjct: 1455 SPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGS 1514
Query: 327 VTESQSLFSDNFRHPNPIPSGLPPFPSSPQTS----SDWPTAPEPQSLFTSETIPVSSST 382
T S H +P + P TS + PT SL T+ T S+S
Sbjct: 1515 TTASSLGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSA 1574
Query: 383 DWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTT 442
Q S D P T A +E + +PS +PT+ S+S TT
Sbjct: 1575 GLQEESTTFQSWPSSSDTTPSPPGTT----AAPVEVSTTYHSRPSSTPTT-HFSASSTTL 1629
Query: 443 AKGPGSGFLHPAAATNANSL---NSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMA 499
+ S +H + +L S SVL + + PG
Sbjct: 1630 GRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTT---AG 1686
Query: 500 FPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIPASSGNSLDSLQDDNPPH 559
S + +P D L P T SSG S +S + P
Sbjct: 1687 LSEKSTTFYSSPRSP-------DTTLSPASTT------------SSGVSEESTTSHSRPG 1727
Query: 560 --WLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQ 617
+ T M G S S HS+P ST L S ++FHS P +
Sbjct: 1728 STHTTAFPGSTTMPGVSQE-STASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTE 1786
Query: 618 TAFRPPSKTPTDLLQSST 635
T P + T + LL++ST
Sbjct: 1787 TTLLPDNTTASGLLEAST 1804
Score = 40.4 bits (93), Expect = 0.005
Identities = 86/378 (22%), Positives = 126/378 (33%), Gaps = 41/378 (10%)
Query: 271 SPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSN----PVIPISSSNHSARSPFEGA 326
SP S +S + + Q ++ T + P + S P SS + + G+
Sbjct: 3012 SPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTASHSSQGSTEATLSPGS 3071
Query: 327 VTESQSLFSDNFRHPNPIPSGLPPFPSSPQTS----SDWPTAPEPQSLFTSETIPVSSST 382
T S H +P + P TS + PT SL T+ T S+S
Sbjct: 3072 TTASSLGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSA 3131
Query: 383 DWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTT 442
Q S D P T A +E + +PS +PT+ S+S TT
Sbjct: 3132 GLQEESTTFQSWPSSSDTTPSPPGTT----AAPVEVSTTYHSRPSSTPTT-HFSASSTTL 3186
Query: 443 AKGPGSGFLHPAAATNANSL---NSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMA 499
+ S +H + +L S SVL + + PG
Sbjct: 3187 GRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTT---AG 3243
Query: 500 FPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIPASSGNSLDSLQDDNPPH 559
S + +P D L P T SSG S +S + P
Sbjct: 3244 LSEKSTTFYSSPRSP-------DTTLSPASTT------------SSGVSEESTTSHSRPG 3284
Query: 560 --WLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQ 617
+ T M G S S HS+P ST L S ++FHS P +
Sbjct: 3285 STHTTAFPGSTTMPGVSQE-STASHSSPGSTDTTLSPGSTTASSLGPESTTFHSGPGSTE 3343
Query: 618 TAFRPPSKTPTDLLQSST 635
T P + T + LL++ST
Sbjct: 3344 TTLLPDNTTASGLLEAST 3361
Score = 38.9 bits (89), Expect = 0.015
Identities = 96/405 (23%), Positives = 149/405 (36%), Gaps = 79/405 (19%)
Query: 249 PNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNP 308
P + ST ++ T L P+ S+G G+ S S+S P
Sbjct: 2321 PGLSEASTTFYSSPRSPTTTLS-----PASMTSLGVGEESTT-------------SRSQP 2362
Query: 309 VIPISSSNHSARSPFE----GAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTS--SDWP 362
S HS SP G ES +++S + P + FP +P TS + P
Sbjct: 2363 -----GSTHSTVSPASTTTPGLSEESTTVYSSS-----PGSTETTVFPRTPTTSVRGEEP 2412
Query: 363 T------APEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLI 416
T A +LFT ++ S T+ AF GS + L P +T ADL
Sbjct: 2413 TTFHSRPASTHTTLFTEDST-TSGLTEESTAFP-GSPASTQTGL---PATLTT---ADLG 2464
Query: 417 EKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQF 476
E+ + + T+L + S T+ G + P+ + +++ +T P
Sbjct: 2465 EESTTFPSSSGSTGTTLSPARSTTSGLVGEST----PSRLSPSSTETTTLPGSPTTPSLS 2520
Query: 477 QQHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANP-TSNSNFLDLNLPPQHNTGLGG 535
++ Y S PR+ + T +P T+ S+ + H+ G
Sbjct: 2521 EKSTTFYTS---------------PRSP----DATLSPATTTSSGVSEESSTSHSQP-GS 2560
Query: 536 IPVAGIPASS---GNSLDSLQDDNPPHWLKS--LQALTEMDGPSAAPSQTHHSAPFSTQI 590
P S+ G S S + P + L A T GPS S T HS+P ST
Sbjct: 2561 THTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQE-STTSHSSPGSTDT 2619
Query: 591 PLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
L S ++FHS P T P S T + ++++ST
Sbjct: 2620 ALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEAST 2664
Score = 37.7 bits (86), Expect = 0.033
Identities = 86/366 (23%), Positives = 128/366 (34%), Gaps = 62/366 (16%)
Query: 292 SNSDT-PSPP--------PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342
S+ DT P+PP P + I +++ SARS G V ES + H +
Sbjct: 782 SSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTY------HSS 835
Query: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402
P + FP S TS E + +S T +SS+ +A
Sbjct: 836 PGSTQTMHFPESDTTSG---RGEESTTSHSSTTHTISSAPSTTSA--------------- 877
Query: 403 DPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHP---AAATNA 459
L+E+ S P + T+ SS TT+ + S H A T
Sbjct: 878 ------------LVEEPTSYHSSPGSTATTHFPDSS-TTSGRSEESTASHSSQDATGTIV 924
Query: 460 NSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNH-----TANP 514
ST SVL + + PG P ++ R++ H + T +P
Sbjct: 925 LPARSTTSVLLGESTTSPISSGSMETTALPGSTTT-PGLS-ERSTTFHSSPRSPATTLSP 982
Query: 515 TSNSNFLDLNLPPQHNTGLGGIPVAGIPASS---GNSLDSLQDDNPPHWLKS--LQALTE 569
S ++ + G P S+ G S S + P + L A T
Sbjct: 983 ASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTT 1042
Query: 570 MDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTD 629
GPS S T HS+ ST L S ++FHS P T P S T +
Sbjct: 1043 TSGPSQE-STTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLFPDSTTSSG 1101
Query: 630 LLQSST 635
++++ST
Sbjct: 1102 IVEAST 1107
Score = 37.0 bits (84), Expect = 0.056
Identities = 84/399 (21%), Positives = 139/399 (34%), Gaps = 42/399 (10%)
Query: 267 TPLQSPIDKPSDSLSIGNGDNSQQISNS---------DTPSPPPGLSKSNPVIPISSSNH 317
TP+ S P +LS Q S + TP+PP + ++ + +S+++H
Sbjct: 3361 TPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPP---TTTSAFVELSTTSH 3417
Query: 318 SARSP-----FEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSS---DWPTAPEPQS 369
+ S F + T H +P+ + P P+ TS + T
Sbjct: 3418 GSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPG 3477
Query: 370 LFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLS 429
+ P S +T + S + P + L+E+ S P +
Sbjct: 3478 STQTMHFPESDTTSGRGEESTTSHSSTTHTISSAP-----STTSALVEEPTSYHSSPGST 3532
Query: 430 PTSLQNSSSHTTTAKGPGSGFLHP---AAATNANSLNSTFSVLPQRFPQFQQHRAVYNSF 486
T+ SS TT+ + S H A T ST SVL +
Sbjct: 3533 ATTHFPDSS-TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETT 3591
Query: 487 SFPGQAARYPWMAFPRNSIMHLNH-----TANPTSNSNFLDLNLPPQHNTGLGGIPVAGI 541
+ PG P ++ +++ H + T +P S ++ ++ G
Sbjct: 3592 ALPGSTTT-PGLS-EKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAF 3649
Query: 542 PASS---GNSLDSLQDDNPPHWLKS--LQALTEMDGPSAAPSQTHHSAPFSTQIPLHRAS 596
P S+ G S S + P + L A T G S+ S T HS+ ST L S
Sbjct: 3650 PDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSG-SSQESTTSHSSSGSTDTALSPGS 3708
Query: 597 WNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++FHS P T P S T + ++++ST
Sbjct: 3709 TTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVEAST 3747
Score = 36.6 bits (83), Expect = 0.073
Identities = 78/395 (19%), Positives = 140/395 (35%), Gaps = 37/395 (9%)
Query: 267 TPLQSPIDKPSDSLSIGNGDNSQQISNS---------DTPSPPPGLSKSNPVIPISSSNH 317
TP+ S P +LS Q S + TP+PP + ++ + +S+++H
Sbjct: 4444 TPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPP---TTTSAFVELSTTSH 4500
Query: 318 SARSP-----FEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSS---DWPTAPEPQS 369
+ S F + T H +P+ + P P+ TS + T
Sbjct: 4501 GSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPG 4560
Query: 370 LFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLS 429
+ P S++T + S + P + L+E+ S P +
Sbjct: 4561 STQTMHFPESNTTSGRGEESTTSHSSTTHTISSAP-----STTSALVEEPTSYHSSPGST 4615
Query: 430 PTSLQNSSSHTTTAKGPGSGFLHP---AAATNANSLNSTFSVLPQRFPQFQQHRAVYNSF 486
T+ SS TT+ + S H A T ST SVL +
Sbjct: 4616 ATTHFPDSS-TTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETT 4674
Query: 487 SFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLP-PQHNTGLGGIPVAGI--PA 543
+ PG P ++ +++ H + ++ PT++ + L + +T + PVA P+
Sbjct: 4675 ALPGSTTT-PGLS-EKSTTFHSSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPS 4732
Query: 544 SSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPP 603
+ ++ L +++ + T S+ S + S H S P
Sbjct: 4733 PARSTTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTS 4792
Query: 604 S---NPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
+ P+S+HS P T P S T + + ST
Sbjct: 4793 ALVEEPTSYHSSPGSIATTHFPESSTTSGRSEEST 4827
Score = 36.2 bits (82), Expect = 0.095
Identities = 76/370 (20%), Positives = 120/370 (32%), Gaps = 61/370 (16%)
Query: 301 PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD 360
PG + ++ + P S++ HS+ E + + S P+ S SP T+
Sbjct: 1763 PGSTTASSLGPESTTFHSSPGSTETTLLPDNTTASGLLEASTPVHSST----GSPHTTLS 1818
Query: 361 WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
P S+T + F S +D + P + +E
Sbjct: 1819 ----------------PAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSA-----FVELST 1857
Query: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHP---AAATNANSLNSTFSVLPQRFPQFQ 477
+ PS +PT+ S+S TT + S +H A AT + ST S L + +
Sbjct: 1858 TSHGSPSSTPTT-HFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTAYH 1916
Query: 478 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP 537
+ FP + R S HT + ++ + P +++ G
Sbjct: 1917 SSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSTA 1976
Query: 538 VAGIPASS---GNSLDSLQDDN----------PPHWLKSL--------------QALTEM 570
P SS G S +S + P S+ T +
Sbjct: 1977 TTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTAL 2036
Query: 571 DGPSAAP-----SQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSK 625
G + P S T HS+P S L AS ++ HS P T P S
Sbjct: 2037 PGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPDST 2096
Query: 626 TPTDLLQSST 635
T L + ST
Sbjct: 2097 TTPGLSRHST 2106
Score = 34.7 bits (78), Expect = 0.28
Identities = 78/338 (23%), Positives = 116/338 (34%), Gaps = 64/338 (18%)
Query: 303 LSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWP 362
L S PV + S H+ SP + +S ++ PS P+ P T+S +
Sbjct: 745 LEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSW------PSSKDTRPAPPTTTSAFV 798
Query: 363 TAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSV 422
EP + TS P S T +A R + L+E+ +
Sbjct: 799 ---EPST--TSHGSPSSIPTTHISA---------------------RSTTSGLVEESTTY 832
Query: 423 QDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAV 482
P + T + S TT+ +G S H + +S ST S L + +
Sbjct: 833 HSSPGSTQT-MHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYH----- 886
Query: 483 YNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIP 542
S PG A FP +S + S+S+ Q TG +P
Sbjct: 887 ----SSPGSTAT---THFPDSSTTSGRSEESTASHSS--------QDATG-----TIVLP 926
Query: 543 ASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAP-----SQTHHSAPFSTQIPLHRASW 597
A S S+ + P S++ T + G + P S T HS+P S L AS
Sbjct: 927 ARSTTSVLLGESTTSPISSGSMET-TALPGSTTTPGLSERSTTFHSSPRSPATTLSPAST 985
Query: 598 NPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++ S P T P S T L + ST
Sbjct: 986 TSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHST 1023
Score = 33.5 bits (75), Expect = 0.62
Identities = 85/403 (21%), Positives = 137/403 (33%), Gaps = 54/403 (13%)
Query: 255 STGSVDKNKNKVTPLQSPIDKPS-----DSLSIGNGDNSQQISNSDTPS---PPPGLSKS 306
ST + ++ T SP P+ S ++G + S + +S + P P S +
Sbjct: 4679 STTTPGLSEKSTTFHSSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTT 4738
Query: 307 NPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSS----DWP 362
+ ++ S++ HS+ + S S S SSP +++ + P
Sbjct: 4739 SGLVEESTAYHSSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEP 4798
Query: 363 TA--PEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
T+ P S+ T+ P SS+T ++ S P+ + G P + E
Sbjct: 4799 TSYHSSPGSIATTH-FPESSTTSGRSEESTASHSSPDTN-GITPLPAHFTTSGRIAESTT 4856
Query: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHR 480
+SP S++ + + T T G S ST R P
Sbjct: 4857 FY-----ISPGSMETTLASTATTPGL--------------SAKSTILYSSSRSPDQTLSP 4897
Query: 481 AVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAG 540
A S S G+ P + + H T+ S Q +T P +
Sbjct: 4898 ASMTSSSISGE----PTSLYSQAESTHTTAFPASTTTSGL------SQESTTFHSKPGST 4947
Query: 541 IPASSGNSLDS---LQDDNPPHWLKSLQALTEMDGPSAAP-----SQTHHSAPFSTQIPL 592
S S+ + Q+ PH T + P S T +S+P ST+
Sbjct: 4948 ETTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTTVPGLSEESTTFYSSPGSTETTA 5007
Query: 593 HRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
S N S S+ PGF P + T TD+ Q ST
Sbjct: 5008 FSHS-NTMSIHSQQSTPFPDSPGFTHTVLPATLTTTDIGQEST 5049
Score = 32.7 bits (73), Expect = 1.1
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 568 TEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTP 627
T M G S S HS P ST L + P ++FHS P +T P + T
Sbjct: 327 TTMPGVSQE-STASHSIPGSTDTTLSPGTTTPSSLGPESTTFHSSPGYTKTTRLPDNTTT 385
Query: 628 TDLLQSST 635
+ LL++ST
Sbjct: 386 SGLLEAST 393
Score = 31.2 bits (69), Expect = 3.1
Identities = 87/382 (22%), Positives = 131/382 (34%), Gaps = 68/382 (17%)
Query: 276 PSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHS-----ARSPFEGAVTES 330
P + G G+ S +S T + S ++ ++ +S HS A + F + T S
Sbjct: 3485 PESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTS 3544
Query: 331 QSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGF 390
H + +G P+ TS L S T P+SS + A
Sbjct: 3545 GRSEESTASHSSQDATGTIVLPARSTTSV---------LLGESTTSPISSGSMETTALP- 3594
Query: 391 GSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQP-----SLSPTSLQNSS---SHTTT 442
GS+ P L EK + P +LSP S +S TT+
Sbjct: 3595 GSTTTP-----------------GLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTS 3637
Query: 443 AKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPR 502
PGS H A ++ + P +H S S PG A
Sbjct: 3638 HSRPGS--THTTAFPDSTTT-----------PGLSRHSTT--SHSSPGSTDTTLLPASTT 3682
Query: 503 NSIMHLNHTANPTSNSNFLDLNLPPQHNTGLG-GIPVAGIPASSGNSLDSLQDDNPPHWL 561
S T + +S+ + D L P T L G +S G++ +L D+
Sbjct: 3683 TSGSSQESTTSHSSSGS-TDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTS-S 3740
Query: 562 KSLQALTEMDGPSAAPSQTHHSAPF--------STQIPLHRASWNPYPPPSNPSSFHSPP 613
++A T + + +P T A ST H AS + P P PS+ +P
Sbjct: 3741 GIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSP--PSTATAPV 3798
Query: 614 PGFQTAFRPPSKTPTDLLQSST 635
T R P TPT +S+
Sbjct: 3799 EESTTYHRSPGSTPTTHFPASS 3820
Score = 30.8 bits (68), Expect = 4.0
Identities = 89/382 (23%), Positives = 130/382 (34%), Gaps = 68/382 (17%)
Query: 276 PSDSLSIGNGDNSQ--QISNSDTPSPPPGLSKS---NPVIPISSSNHSARSPFEGAVTES 330
P S + G + S+ S + T S PP + + P SS +A + F + T S
Sbjct: 1928 PESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTS 1987
Query: 331 QSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGF 390
H + +G P+ TS L S T P+SS + A
Sbjct: 1988 GRSEESTASHSSQDATGTIVLPARSTTSV---------LLGESTTSPISSGSMETTALP- 2037
Query: 391 GSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQP-----SLSPTSLQNSS---SHTTT 442
GS+ P L EK + P +LSP S +S TT+
Sbjct: 2038 GSTTTP-----------------GLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTS 2080
Query: 443 AKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPR 502
PGS H A ++ + P +H S S PG A
Sbjct: 2081 HSRPGS--THTTAFPDSTTT-----------PGLSRHSTT--SHSSPGSTDTTLLPASTT 2125
Query: 503 NSIMHLNHTANPTSNSNFLDLNLPPQHNTGLG-GIPVAGIPASSGNSLDSLQDDNPPHWL 561
S T + +S + D L P T L G +S G++ +L D+
Sbjct: 2126 TSGPSQESTTSHSSPGS-TDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTS-S 2183
Query: 562 KSLQALTEMDGPSAAPSQTHHSAPF--------STQIPLHRASWNPYPPPSNPSSFHSPP 613
++A T + + +P T A ST H AS + P P PS+ +P
Sbjct: 2184 GIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSP--PSTATAPV 2241
Query: 614 PGFQTAFRPPSKTPTDLLQSST 635
T R P TPT +S+
Sbjct: 2242 EESTTYHRSPGSTPTTHFPASS 2263
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 42.0 bits (97), Expect = 0.002
Identities = 48/180 (26%), Positives = 68/180 (37%), Gaps = 42/180 (23%)
Query: 292 SNSDTPSP--------PPGLSKSNPVIP-----ISSSNHSARSPFEGAVTESQSLFSDNF 338
S PSP P G S + P IP IS+ AR+ ESQS S+
Sbjct: 1125 SGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETS 1184
Query: 339 RHPNPIPSGLPP---FP-------------------------SSPQTSSDWPTAPEPQSL 370
+ +P L P FP S PQ + + P P P+S
Sbjct: 1185 KGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSR 1244
Query: 371 FTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSP 430
+S ++P +S+ Q S + E L DPF+ L + + +LSVQ P +P
Sbjct: 1245 -SSHSLPSEASSQPQVKTNGISDGKRESPLKIDPFEDLSFNLLAVSKAQLSVQTSPVPTP 1303
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 41.6 bits (96), Expect = 0.002
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 34/164 (20%)
Query: 300 PPGLSKSNPVIP-----ISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPP---F 351
P G S + P IP IS+ AR+ ESQS S+ + +P L P F
Sbjct: 1227 PAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAF 1286
Query: 352 P-------------------------SSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQA 386
P S PQ + + P P P+S +S ++P +S+ Q
Sbjct: 1287 PPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSR-SSHSLPSEASSQPQV 1345
Query: 387 AFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSP 430
S + E L DPF+ L + + +LSVQ P +P
Sbjct: 1346 KTNGISDGKRESPLKIDPFEDLSFNLLAVSKAQLSVQTSPVPTP 1389
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 41.6 bits (96), Expect = 0.002
Identities = 60/278 (21%), Positives = 105/278 (37%), Gaps = 19/278 (6%)
Query: 288 SQQISNSDTPSPPP-----GLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342
+Q + P P P G + P + S+H P A T++
Sbjct: 1159 NQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQTSR---------P 1209
Query: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTS-ETIPVSSSTDWQAAFGFGSSKQPEDDLG 401
P+ P P PQT ++ P + EP + S E + S + + +P + G
Sbjct: 1210 KTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPLPPRPNLNRG 1269
Query: 402 FDPFDVTRKALADLIEKELSVQDQPS--LSPTSLQNSSSHTTTAKGPGSGFLHPAAATNA 459
FD + L + + ++ PS +P + + S + K SG A+ +N+
Sbjct: 1270 FDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGATKRASPSNS 1329
Query: 460 NSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSN 519
+ S P Q +A + + AA + PRN ++ ANP +
Sbjct: 1330 RRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSPTPLANPPVPGS 1389
Query: 520 F-LDLNLPPQHNTGLGGIPVAGIPASSGNSLDSLQDDN 556
F + L PQ++T + V G+ + SL+ QD +
Sbjct: 1390 FPNNSGLNPQNST-VSVAAVGGVVEDNKESLNVPQDSD 1426
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 41.2 bits (95), Expect = 0.003
Identities = 86/378 (22%), Positives = 127/378 (33%), Gaps = 41/378 (10%)
Query: 271 SPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSN----PVIPISSSNHSARSPFEGA 326
SP S +S + + Q ++ T + P + S+ P SS + + G+
Sbjct: 942 SPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTEATLSPGS 1001
Query: 327 VTESQSLFSDNFRHPNPIPSGLPPFPSSPQTS----SDWPTAPEPQSLFTSETIPVSSST 382
T S H +P + P TS + PT SL T+ T S+S
Sbjct: 1002 TTASSLGQQSTTFHSSPGDTETTLLPDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSA 1061
Query: 383 DWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTT 442
Q S D P T A +E + +PS +PT+ S+S TT
Sbjct: 1062 GLQEESTTFQSWPSSSDTTPSPPGTT----AAPVEVSTTYHSRPSSTPTT-HFSASSTTL 1116
Query: 443 AKGPGSGFLHPAAATNANSL---NSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMA 499
+ S +H + +L S SVL + + PG
Sbjct: 1117 GRSEESTTVHSSPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTT---AG 1173
Query: 500 FPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIPASSGNSLDSLQDDNPPH 559
S + +P D L P T SSG S +S + P
Sbjct: 1174 LSEKSTTFYSSPRSP-------DTTLSPASTT------------SSGVSEESTTSHSRPG 1214
Query: 560 --WLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQ 617
+ T M G S S HS+P ST L S ++FHS P +
Sbjct: 1215 STHTTAFPGSTTMPGVSQE-STASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTE 1273
Query: 618 TAFRPPSKTPTDLLQSST 635
T P + T + LL++ST
Sbjct: 1274 TTLLPDNTTASGLLEAST 1291
Score = 41.2 bits (95), Expect = 0.003
Identities = 77/355 (21%), Positives = 127/355 (35%), Gaps = 48/355 (13%)
Query: 301 PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD 360
PG + ++ + P S++ HS+ E + + S P+ S SP T+
Sbjct: 1250 PGSTTASSLGPESTTFHSSPGSTETTLLPDNTTASGLLEASTPVHSST----GSPHTTLS 1305
Query: 361 WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
P S+T + F S +D + P + +E
Sbjct: 1306 ----------------PAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSA-----FVELST 1344
Query: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHP---AAATNANSLNSTFSVLPQRFPQFQ 477
+ PS +PT+ S+S TT + S +H A AT + ST S L + +
Sbjct: 1345 TSHGSPSSTPTT-HFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTAYH 1403
Query: 478 QHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIP 537
+ FP + R S HT + ++ + P +++ G I
Sbjct: 1404 SSPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSIA 1463
Query: 538 VAGIPAS---SGNSLDSLQDDNPP--HWLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPL 592
P S SG S +S + P + + L A G A S T + +P S + L
Sbjct: 1464 TTHFPESSTTSGRSEESTASHSSPDTNGITPLPAHFTTSG-RIAESTTFYISPGSMETTL 1522
Query: 593 HRASWNP---------YPPP--SNPSSFH-SPPPGFQTAFRPPSKTPTDLLQSST 635
+ P Y P++F+ SP P + T F P S + + L + ST
Sbjct: 1523 ASTATTPGLSAKSTILYTSDLVGEPTTFYISPSPTYTTLF-PASSSTSGLTEEST 1576
Score = 37.7 bits (86), Expect = 0.033
Identities = 86/366 (23%), Positives = 128/366 (34%), Gaps = 62/366 (16%)
Query: 292 SNSDT-PSPP--------PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPN 342
S+ DT P+PP P + I +++ SARS G V ES + H +
Sbjct: 269 SSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTY------HSS 322
Query: 343 PIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402
P + FP S TS E + +S T +SS+ +A
Sbjct: 323 PGSTQTMHFPESDTTSG---RGEESTTSHSSTTHTISSAPSTTSA--------------- 364
Query: 403 DPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHP---AAATNA 459
L+E+ S P + T+ SS TT+ + S H A T
Sbjct: 365 ------------LVEEPTSYHSSPGSTATTHFPDSS-TTSGRSEESTASHSSQDATGTIV 411
Query: 460 NSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNH-----TANP 514
ST SVL + + PG P ++ R++ H + T +P
Sbjct: 412 LPARSTTSVLLGESTTSPISSGSMETTALPGSTTT-PGLS-ERSTTFHSSPRSPATTLSP 469
Query: 515 TSNSNFLDLNLPPQHNTGLGGIPVAGIPASS---GNSLDSLQDDNPPHWLKS--LQALTE 569
S ++ + G P S+ G S S + P + L A T
Sbjct: 470 ASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTT 529
Query: 570 MDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTD 629
GPS S T HS+ ST L S ++FHS P T P S T +
Sbjct: 530 TSGPSQE-STTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTLFPDSTTSSG 588
Query: 630 LLQSST 635
++++ST
Sbjct: 589 IVEAST 594
Score = 34.7 bits (78), Expect = 0.28
Identities = 78/338 (23%), Positives = 116/338 (34%), Gaps = 64/338 (18%)
Query: 303 LSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWP 362
L S PV + S H+ SP + +S ++ PS P+ P T+S +
Sbjct: 232 LEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSW------PSSKDTRPAPPTTTSAFV 285
Query: 363 TAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSV 422
EP + TS P S T +A R + L+E+ +
Sbjct: 286 ---EPST--TSHGSPSSIPTTHISA---------------------RSTTSGLVEESTTY 319
Query: 423 QDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAV 482
P + T + S TT+ +G S H + +S ST S L + +
Sbjct: 320 HSSPGSTQT-MHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYH----- 373
Query: 483 YNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIP 542
S PG A FP +S + S+S+ Q TG +P
Sbjct: 374 ----SSPGSTAT---THFPDSSTTSGRSEESTASHSS--------QDATG-----TIVLP 413
Query: 543 ASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAP-----SQTHHSAPFSTQIPLHRASW 597
A S S+ + P S++ T + G + P S T HS+P S L AS
Sbjct: 414 ARSTTSVLLGESTTSPISSGSMET-TALPGSTTTPGLSERSTTFHSSPRSPATTLSPAST 472
Query: 598 NPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++ S P T P S T L + ST
Sbjct: 473 TSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSRHST 510
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 41.2 bits (95), Expect = 0.003
Identities = 92/424 (21%), Positives = 145/424 (34%), Gaps = 77/424 (18%)
Query: 248 NPNFLQLSTGSVDKNKNKVTPLQS--PIDKPSDSLSIGNGDNSQQISNSDTPSP------ 299
+P+ +Q S S + N + LQ+ P+ S+ + + +N + + ++ PSP
Sbjct: 1291 SPSHVQSSPSS---HSNHIPQLQAKGPVPSFSELMEDPDPENPEPTTTNECPSPDTSQNT 1347
Query: 300 ---PPGLSKSNP---VIPISSSNHSARSP---FEGAVTESQS--------------LFSD 336
PP +SK VIP + P ++ V+ S++ L ++
Sbjct: 1348 CKSPPKMSKPGSPGSVIPAQAHGKIFTKPDPQWDSTVSASEAENGVHLKTELQQKQLSNN 1407
Query: 337 NFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTS---ETIPVSSSTDWQAAFGFGSS 393
N P SS Q S P+ P S E P SS+ G+ S
Sbjct: 1408 NQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHGYLSP 1467
Query: 394 KQPEDDLGFDPFDV--TRKALADLIEKELSVQDQPSLS--PTSLQNSSSHTTTAKGPGSG 449
K P LG P+ ++ ++E P+ P + Q ++S T + P
Sbjct: 1468 KPPSQQLG-SPYRPHHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQ 1526
Query: 450 FLHPAAATNANSLNSTFSVLPQRFP-------------QFQQHRAVYNSFSFPGQAARYP 496
+ N SLNST P P FQ + + S S P
Sbjct: 1527 SSATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGP 1586
Query: 497 WMAFPRNSIMHL--NHTANPTSNSNFLDLNLPPQHNTGLGGI--PVAGIPASSGNSLDSL 552
A P + H P +FL P H+ + P P + G L
Sbjct: 1587 NQALPGTTSQQTVPGHHVTP---GHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHLVQQ 1643
Query: 553 QDDNPPHWLKSLQALTEMDGP--SAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFH 610
+ + H ++ + GP + P HS +P P PPP P+ H
Sbjct: 1644 PNSHQQH------SVAHVVGPVHAVTPGSHIHSQTAGHHLP-------PPPPPPGPAPHH 1690
Query: 611 SPPP 614
PPP
Sbjct: 1691 HPPP 1694
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 41.2 bits (95), Expect = 0.003
Identities = 92/424 (21%), Positives = 145/424 (34%), Gaps = 77/424 (18%)
Query: 248 NPNFLQLSTGSVDKNKNKVTPLQS--PIDKPSDSLSIGNGDNSQQISNSDTPSP------ 299
+P+ +Q S S + N + LQ+ P+ S+ + + +N + + ++ PSP
Sbjct: 1291 SPSHVQSSPSS---HSNHIPQLQAKGPVPSFSELMEDPDPENPEPTTTNECPSPDTSQNT 1347
Query: 300 ---PPGLSKSNP---VIPISSSNHSARSP---FEGAVTESQS--------------LFSD 336
PP +SK VIP + P ++ V+ S++ L ++
Sbjct: 1348 CKSPPKMSKPGSPGSVIPAQAHGKIFTKPDPQWDSTVSASEAENGVHLKTELQQKQLSNN 1407
Query: 337 NFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTS---ETIPVSSSTDWQAAFGFGSS 393
N P SS Q S P+ P S E P SS+ G+ S
Sbjct: 1408 NQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHGYLSP 1467
Query: 394 KQPEDDLGFDPFDV--TRKALADLIEKELSVQDQPSLS--PTSLQNSSSHTTTAKGPGSG 449
K P LG P+ ++ ++E P+ P + Q ++S T + P
Sbjct: 1468 KPPSQQLG-SPYRPHHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQ 1526
Query: 450 FLHPAAATNANSLNSTFSVLPQRFP-------------QFQQHRAVYNSFSFPGQAARYP 496
+ N SLNST P P FQ + + S S P
Sbjct: 1527 SSATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGP 1586
Query: 497 WMAFPRNSIMHL--NHTANPTSNSNFLDLNLPPQHNTGLGGI--PVAGIPASSGNSLDSL 552
A P + H P +FL P H+ + P P + G L
Sbjct: 1587 NQALPGTTSQQTVPGHHVTP---GHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHLVQQ 1643
Query: 553 QDDNPPHWLKSLQALTEMDGP--SAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFH 610
+ + H ++ + GP + P HS +P P PPP P+ H
Sbjct: 1644 PNSHQQH------SVAHVVGPVHAVTPGSHIHSQTAGHHLP-------PPPPPPGPAPHH 1690
Query: 611 SPPP 614
PPP
Sbjct: 1691 HPPP 1694
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 40.8 bits (94), Expect = 0.004
Identities = 64/247 (25%), Positives = 97/247 (39%), Gaps = 46/247 (18%)
Query: 263 KNKVTPLQSPIDKPSDSLSIGNGDNSQQ------ISNSD----------TPSPPPGLSKS 306
+N V+PLQ+ I K + + +N Q I SD TPSP G S
Sbjct: 937 QNYVSPLQATISKSQTNPVVKLSNNPQLSCSSSLIKTSDKPLMYRLPLSTPSPGNGSQGS 996
Query: 307 NPVIP------ISSSNHSAR------------SPFEGAVTESQSLFSDNFRHPNPIPSGL 348
+P++ +SSN+ A+ SPF A + + P P+PS
Sbjct: 997 HPLVSRTVPSTTTSSNYLAKAMVSQISTQGFKSPFSMAASPKLAASPKPATSPKPLPSPK 1056
Query: 349 P---PFPS---SPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGF 402
P P PS P S+ + P T P SSS + A G SS
Sbjct: 1057 PSASPKPSLSAKPSVSTKLISKSNPTPKPTVS--PSSSSPNALVAQGSHSSTNSPVHKQP 1114
Query: 403 DPFDVTRKA-LADLIEKELSVQDQPSLS---PTSLQNSSSHTTTAKGPGSGFLHPAAATN 458
+++R++ +L+ + P+ + P+ L NSSS T K SG A+
Sbjct: 1115 SGMNISRQSPTLNLLPSSRTSGLPPTKNLQAPSKLTNSSSTGTVGKNSLSGIAMNVPASR 1174
Query: 459 ANSLNST 465
++LNS+
Sbjct: 1175 GSNLNSS 1181
>gi|153791514 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 40.4 bits (93), Expect = 0.005
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 6 DAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDE-NGL-CPACRK 58
DA + +ECP+CME + + CG+ ICR C ++ NG+ CP C K
Sbjct: 12 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSK 66
>gi|153792582 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 40.4 bits (93), Expect = 0.005
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 6 DAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDE-NGL-CPACRK 58
DA + +ECP+CME + + CG+ ICR C ++ NG+ CP C K
Sbjct: 12 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSK 66
>gi|18201913 forkhead box N1 [Homo sapiens]
Length = 648
Score = 40.4 bits (93), Expect = 0.005
Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 33/233 (14%)
Query: 244 LYKLNPNFLQLSTGSVDKNKNK-VTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPG 302
L+ LNP + + K K K ++ + KP + S+ GD +++ + PPPG
Sbjct: 345 LWALNPAKIDKMQEELQKWKRKDPIAVRKSMAKPEELDSL-IGDKREKLGSPLLGCPPPG 403
Query: 303 LSKSNPVIPIS---------SSNHSARSPFEG-------AVTESQSLFSDNFRHPNP--I 344
LS S P+ P++ S H A P G + + S + + H +P
Sbjct: 404 LSGSGPIRPLAPPAGLSPPLHSLHPAPGPIPGKNPLQDLLMGHTPSCYGQTYLHLSPGLA 463
Query: 345 PSGLPPFPSSPQTSSDWPTAPEP----QSLFTSETIPVSSS---TDWQAAFGFGSSKQPE 397
P G PP P PQ +P S + T P S+ + A + P+
Sbjct: 464 PPG-PPQPLFPQPDGHLELRAQPGTPQDSPLPAHTPPSHSAKLLAEPSPARTMHDTLLPD 522
Query: 398 DDLGFDPFDVTRKALADLIEK----ELSVQDQPSLSPTSLQNSSSHTTTAKGP 446
DLG D D +L D + E D +L P L SS +++ P
Sbjct: 523 GDLGTD-LDAINPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSSPTSSSMPPP 574
>gi|47132529 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 40.4 bits (93), Expect = 0.005
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 45/201 (22%)
Query: 234 QEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISN 293
Q+ EQ L ++ + P L S SVD+ K K L S +++P+ S+ G + ++
Sbjct: 286 QKIEQVLKEQPGRGLPQ-LPSSCYSVDRGKRKTGTLGS-LEEPAGGASVSAGSRAVGVAG 343
Query: 294 --SDTPSPP------------PGLSKSNPVIPISSSNHSARSP-------FEGAVTESQS 332
+ PP PG S S+ +P SS A +P FE ++
Sbjct: 344 VAGEAGPPPEREGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPKRTFEYEADKNPK 403
Query: 333 LFSDNFRHPNPIPSGLPPFPSSP--------------------QTSSDWPTAPEPQSLFT 372
N P+P P+ PP PS+P + S ++ A QSL+
Sbjct: 404 SKPSNGLPPSPTPAAPPPLPSTPAPPVTRRPKKDMRGHRKSQSRKSFEFEDASSLQSLYP 463
Query: 373 SETIPVSSSTDWQAAFGFGSS 393
S P + T+ Q FG S+
Sbjct: 464 SS--PTENGTENQPKFGSKST 482
>gi|47132532 suppression of tumorigenicity 5 isoform 1 [Homo
sapiens]
Length = 1137
Score = 40.4 bits (93), Expect = 0.005
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 45/201 (22%)
Query: 234 QEYEQKLLQELYKLNPNFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISN 293
Q+ EQ L ++ + P L S SVD+ K K L S +++P+ S+ G + ++
Sbjct: 286 QKIEQVLKEQPGRGLPQ-LPSSCYSVDRGKRKTGTLGS-LEEPAGGASVSAGSRAVGVAG 343
Query: 294 --SDTPSPP------------PGLSKSNPVIPISSSNHSARSP-------FEGAVTESQS 332
+ PP PG S S+ +P SS A +P FE ++
Sbjct: 344 VAGEAGPPPEREGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPKRTFEYEADKNPK 403
Query: 333 LFSDNFRHPNPIPSGLPPFPSSP--------------------QTSSDWPTAPEPQSLFT 372
N P+P P+ PP PS+P + S ++ A QSL+
Sbjct: 404 SKPSNGLPPSPTPAAPPPLPSTPAPPVTRRPKKDMRGHRKSQSRKSFEFEDASSLQSLYP 463
Query: 373 SETIPVSSSTDWQAAFGFGSS 393
S P + T+ Q FG S+
Sbjct: 464 SS--PTENGTENQPKFGSKST 482
>gi|217416388 neuralized homolog 1B [Homo sapiens]
Length = 555
Score = 40.0 bits (92), Expect = 0.007
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 13 ECPLCMEPLEIDDINFFPCTCGYQ-ICRFCWHRIRTDENGLCPACRKPYPEDPAVYKP 69
EC +C + E+D + + TCG+ +C C R++ CP CR+P + +Y+P
Sbjct: 502 ECTVCFDG-EVDTVIY---TCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYRP 555
>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
Length = 539
Score = 39.7 bits (91), Expect = 0.009
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 9 EDPVECPLCME----PLEIDDINFFPCTCGYQICRFCWHRIR--TDENGLCPACRKPYPE 62
E+ V C +C++ P+ ID CG+ CR C +R + +CP C+KP+ +
Sbjct: 11 EEEVTCSICLDYLRDPVTID--------CGHVFCRSCTTDVRPISGSRPVCPLCKKPFKK 62
Query: 63 D---PAVYKPLSQEELQRIKNEKKQKQNE 88
+ P E ++R+K +K ++ E
Sbjct: 63 ENIRPVWQLASLVENIERLKVDKGRQPGE 91
>gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens]
Length = 312
Score = 39.3 bits (90), Expect = 0.011
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 14/136 (10%)
Query: 60 YPEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLAS-VRVVQKNLVFVVGLSQ 118
+PE P S+ Q I + Q + + H + Q + V +
Sbjct: 54 HPEQPG-----SEASTQPIAGTQTVPQTDEAAQTDSQPLHPSDPTEKQQPKRLHVSNIPF 108
Query: 119 RLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNN 178
R DP++ + FG+FGKI V I +G +VT+ S DA RA + +N
Sbjct: 109 RFRDPDLR---QMFGQFGKILDVEI-----IFNERGSKGFGFVTFETSSDADRAREKLNG 160
Query: 179 VVVDGRTLKASLGTTK 194
+V+GR ++ + T +
Sbjct: 161 TIVEGRKIEVNNATAR 176
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 38.9 bits (89), Expect = 0.015
Identities = 80/338 (23%), Positives = 118/338 (34%), Gaps = 64/338 (18%)
Query: 303 LSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWP 362
L S PV + S H+ SP + +S ++ PS P+ P T+S +
Sbjct: 666 LEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSW------PSSNDTRPAPPTTTSAFV 719
Query: 363 TAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSV 422
EP + TS P S T +A R + L+E+ +
Sbjct: 720 ---EPST--TSHGSPSSIPTTHISA---------------------RSTTSGLVEESTTY 753
Query: 423 QDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAV 482
P + T + S TT+ +G S H + +S ST S L + +
Sbjct: 754 HSSPGSTQT-MHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYH----- 807
Query: 483 YNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIP 542
S PG A FP +S + S+S+ Q TG +P
Sbjct: 808 ----SSPGSTAT---THFPDSSTTSGRSEESIASHSS--------QDATG-----TIVLP 847
Query: 543 ASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAP-----SQTHHSAPFSTQIPLHRASW 597
A S NS+ + P S++ T + G + P S T HS+P S L AS
Sbjct: 848 ARSTNSVLLGESTTSPISSGSMET-TALPGSTTTPGLSERSTTFHSSPRSPATTLSPAST 906
Query: 598 NPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++ HS P T P S T L + ST
Sbjct: 907 TSSGVSEESTTSHSRPGSTHTTAFPDSTTTPGLSRHST 944
Score = 33.5 bits (75), Expect = 0.62
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 568 TEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTP 627
T M G S S HS+P ST L S ++FHS P +T P + T
Sbjct: 1045 TTMPGVSQE-STASHSSPGSTDTTLSPRSTTASSLGPESTTFHSGPGSTETTLLPDNTTA 1103
Query: 628 TDLLQSST 635
+ LL++ST
Sbjct: 1104 SGLLEAST 1111
Score = 33.1 bits (74), Expect = 0.81
Identities = 87/419 (20%), Positives = 139/419 (33%), Gaps = 51/419 (12%)
Query: 265 KVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKS-----NPVIPISSSNHSA 319
K T S P +LS + +S S T PG + + + +P S +A
Sbjct: 997 KSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTA 1056
Query: 320 RSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVS 379
G+ + S S P + P S +T+ P L + T PV
Sbjct: 1057 SHSSPGSTDTTLSPRSTTASSLGPESTTFHSGPGSTETTL-LPDNTTASGLLEAST-PVH 1114
Query: 380 SSTDWQAAF--GFGSSKQPEDDLGFDPFDVTRKAL-------ADLIEKELSVQDQPSLSP 430
SST GS+ + + F + ++ + + +E + PS P
Sbjct: 1115 SSTGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTSHGSPSSIP 1174
Query: 431 TSLQNSSSHTTTAKGPGSGFLHP---AAATNANSLNSTFSVLPQRFPQFQQHRAVYNSFS 487
T+ S+S TT + S +H A AT + ST S L + + +
Sbjct: 1175 TT-HFSASSTTFGRSEESTTVHSSPVAPATTPSPARSTTSGLVEESTAYHSSPGSTQTMH 1233
Query: 488 FPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIPAS--- 544
FP + R S HT + ++ + P +++ G I P S
Sbjct: 1234 FPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSIATTHFPESSTT 1293
Query: 545 SGNSLDSLQDDN----------PPHW------------------LKSLQALTEMDGPSAA 576
SG S +S + P H+ +++ A T +A
Sbjct: 1294 SGRSEESTASHSSPDTNGITPLPAHFTTSGRIAESTTFYISPGSMETTLASTATTPGLSA 1353
Query: 577 PSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
S +S+ S L AS P+S +S T P S T + L Q ST
Sbjct: 1354 KSTILYSSSRSPDQTLSPASMTSSSISGEPTSLYSQAESTHTTAFPASTTTSGLSQEST 1412
Score = 32.7 bits (73), Expect = 1.1
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 568 TEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTP 627
T M G S S HS P ST L + P ++FHS P +T P + T
Sbjct: 248 TTMPGVSQE-STASHSIPGSTDTTLSPGTTTPSSLGPESTTFHSSPGYTKTTRLPDNTTT 306
Query: 628 TDLLQSST 635
+ LL++ST
Sbjct: 307 SGLLEAST 314
Score = 32.0 bits (71), Expect = 1.8
Identities = 79/376 (21%), Positives = 127/376 (33%), Gaps = 49/376 (13%)
Query: 277 SDSLSIGNGDNSQQISNSDTP---SPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSL 333
+ S + G + S + +S +P P S ++ ++ S++ HS+ + S
Sbjct: 1180 ASSTTFGRSEESTTVHSSPVAPATTPSPARSTTSGLVEESTAYHSSPGSTQTMHFPESST 1239
Query: 334 FSDNFRHPNPIPSGLPPFPSSPQTSS----DWPTA--PEPQSLFTSETIPVSSSTDWQAA 387
S S SSP +++ + PT+ P S+ T+ P SS+T ++
Sbjct: 1240 ASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPGSIATTH-FPESSTTSGRSE 1298
Query: 388 FGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSHTTTAKGPG 447
S P+ + G P + E +SP S++ + + T T G
Sbjct: 1299 ESTASHSSPDTN-GITPLPAHFTTSGRIAESTTFY-----ISPGSMETTLASTATTPGL- 1351
Query: 448 SGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPRNSIMH 507
S ST R P A S S G+ P + + H
Sbjct: 1352 -------------SAKSTILYSSSRSPDQTLSPASMTSSSISGE----PTSLYSQAESTH 1394
Query: 508 LNHTANPTSNSNFLDLNLPPQHNTGLGGIPVAGIPASSGNSLDS---LQDDNPPHWLKSL 564
T+ S Q +T P + S S+ + Q+ PH
Sbjct: 1395 TTAFPASTTTSGL------SQESTTFHSKPGSTETTLSPGSITTSSFAQEFTTPHSQPGS 1448
Query: 565 QALTEMDGPSAAP-----SQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTA 619
T + P S T +S+P ST+ S N S S+ PGF
Sbjct: 1449 ALSTVSPASTTVPGLSEESTTFYSSPGSTETTAFSHS-NTMSIHSQQSTPFPDSPGFTHT 1507
Query: 620 FRPPSKTPTDLLQSST 635
P + T TD+ Q ST
Sbjct: 1508 VLPATLTTTDIGQEST 1523
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 38.9 bits (89), Expect = 0.015
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 294 SDTPSPPPGLSKSNPVIPI--SSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPF 351
+ TP P LS SN + P+ +S S R+P A SQ + + IP LP
Sbjct: 318 AQTPLLPAKLSASNALDPMLPASVGGSTRTPRPAAAQPSQKITATK------IPKSLPTK 371
Query: 352 PSSPQTS-----SDWPTAPEPQSLFTSETIP 377
PS+P TS S PT S FT +P
Sbjct: 372 PSAPSTSIVPIKSPHPTQKTAPSSFTKSALP 402
Score = 33.1 bits (74), Expect = 0.81
Identities = 41/175 (23%), Positives = 57/175 (32%), Gaps = 39/175 (22%)
Query: 292 SNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPF 351
+ + T PPP + S+ P S S R P+ + P
Sbjct: 474 ARTSTHKPPPFTALSSSPAPTPGSTRSTRP-----------------------PATMVPP 510
Query: 352 PSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKA 411
S T P P P S T P+ S +A G P + P R
Sbjct: 511 TSGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKA----GPKSSPRKPVPLRPGKAARDV 566
Query: 412 -LADLIEKELSVQDQPS--------LSPTSLQNSSSHTTTAKGPGSGFLHPAAAT 457
L+DL + Q QPS L+P +SS T++ G H A +T
Sbjct: 567 PLSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSS---GYSIFHLAGST 618
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 38.9 bits (89), Expect = 0.015
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 11 PVECPLCMEPLEIDDINFFPCT--CGYQICRFC----W-HRIRTDENG-----LCPACRK 58
P CP+C+EPL P T CG+ C C W HR + G CP C++
Sbjct: 6 PFSCPICLEPLR------EPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAARCPLCQE 59
Query: 59 PYPEDPAVYKPLSQEELQRIK 79
P+P+ + K + EL +++
Sbjct: 60 PFPDGLQLRKNHTLSELLQLR 80
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 38.5 bits (88), Expect = 0.019
Identities = 67/281 (23%), Positives = 96/281 (34%), Gaps = 61/281 (21%)
Query: 266 VTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEG 325
+TP S + S S S S T P + + + P +S R+P
Sbjct: 1895 MTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTST-GTRTPVAH 1953
Query: 326 AVTESQSLFSDNFRHPNPIPSGLPPFPS-------SPQTSSDWPTAPEPQ---------- 368
+ S S F +P P+G PF S S QT++ +PT PQ
Sbjct: 1954 TTSASSSRLPTPFTTHSP-PTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTTLPTHVPPF 2012
Query: 369 --SLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQP 426
SL T T V +T Q A P G P T KA S P
Sbjct: 2013 STSLVTPSTHTVIITTHTQMATSASIHSTP---TGTVPPPTTLKATG-------STHTAP 2062
Query: 427 SLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQFQQHRAVYNSF 486
++ T+ S +H++ + AT ++S S+ S LPQ NS
Sbjct: 2063 PMTVTTSGTSQTHSSF-----------STATASSSFISSSSWLPQ------------NSS 2099
Query: 487 SFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPP 527
S P + + HL+ P S +N L + P
Sbjct: 2100 SRPPSSP-------ITTQLPHLSSATTPVSTTNQLSSSFSP 2133
Score = 35.8 bits (81), Expect = 0.12
Identities = 88/401 (21%), Positives = 142/401 (35%), Gaps = 72/401 (17%)
Query: 266 VTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEG 325
+TP S + S S S S T P + + + P +S + R+P
Sbjct: 1502 ITPTTSGTSQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTSTTTITPNPTSTRT-RTP--- 1557
Query: 326 AVTESQSLFSDNFRHPNPIPSGLPPFPSSP------------QTSSDWPTAPEPQ----- 368
V + S S R P P + PP SSP +T++ +PT PQ
Sbjct: 1558 -VAHTNSATSS--RPPPPFTTHSPPTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTLPT 1614
Query: 369 -------SLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELS 421
SL T T V + T Q A P G P T KA S
Sbjct: 1615 HVPPFSTSLVTPSTHTVITPTHAQMATSASIHSMP---TGTIPPPTTLKATG-------S 1664
Query: 422 VQDQPSLSPTSLQNSS--SHTTTAKGPGSGFLHPAAATNANSLN-STFSVLPQRFPQFQQ 478
P+++ T+ S S TAK S H ++ +A + + ST ++ P
Sbjct: 1665 THTAPTMTLTTSGTSQALSSLNTAKTSTSLHSHTSSTHHAEATSTSTTNITPNPTSTGTP 1724
Query: 479 HRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGIPV 538
V S + +++ + + H + T +P S ++ P H + PV
Sbjct: 1725 PMTVTTSGTSQSRSS-FSTAKTSTSLHSHTSSTHHPEVTST-STTSITPNHTSTGTRTPV 1782
Query: 539 AGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASW- 597
A +++ + L + P S + P S+ P+ S+
Sbjct: 1783 AHTTSATSSRLPT---------------------PFTTHSPPTGTTPISSTGPVTATSFQ 1821
Query: 598 --NPYPPPSNP-SSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
YP PS+P ++ + P F T+ PS T T ++ + T
Sbjct: 1822 TTTTYPTPSHPHTTLPTHVPSFSTSLVTPS-THTVIIPTHT 1861
Score = 33.5 bits (75), Expect = 0.62
Identities = 47/218 (21%), Positives = 79/218 (36%), Gaps = 29/218 (13%)
Query: 268 PLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAV 327
P + + P + + G S + +P PG P P ++ R+ E
Sbjct: 1344 PKSTNQELPGTTATQTTGPRPTPASTTGPTTPQPG----QPTRPTATETTQTRTTTEYTT 1399
Query: 328 TESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQ------------SLFTSET 375
++ +P+PS P +S ++ +PT P+ SL T T
Sbjct: 1400 PQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPTHVPPFSTSLVTPST 1459
Query: 376 IPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQN 435
V + T Q A + P G P T KA S P ++PT+
Sbjct: 1460 HTVITPTHAQMATSASNHSAP---TGTIPPPTTLKATG-------STHTAPPITPTTSGT 1509
Query: 436 SSSHT--TTAKGPGSGFLHPAAATNAN-SLNSTFSVLP 470
S +H+ +T K P S H ++ + + ST ++ P
Sbjct: 1510 SQAHSSFSTNKTPTSLHSHTSSTHHPEVTPTSTTTITP 1547
Score = 33.5 bits (75), Expect = 0.62
Identities = 82/415 (19%), Positives = 139/415 (33%), Gaps = 63/415 (15%)
Query: 266 VTPLQSPIDKPSDSLSIG--NGDNSQQISNSDTPS---PPPGLSKSN-------PVIPIS 313
V P + + PS I + + SN P+ PPP K+ P+ P +
Sbjct: 1447 VPPFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPPPTTLKATGSTHTAPPITPTT 1506
Query: 314 SSNHSARSPFEGAVTESQSLFS--DNFRHPNPIPSG---LPPFPSSPQTSS-----DWPT 363
S A S F T + SL S + HP P+ + P P+S +T + + T
Sbjct: 1507 SGTSQAHSSFSTNKTPT-SLHSHTSSTHHPEVTPTSTTTITPNPTSTRTRTPVAHTNSAT 1565
Query: 364 APEPQSLFTSETIPVSSS----------TDWQAAFGFGSSKQPEDDLGFDPFDVTRKALA 413
+ P FT+ + P SS T ++ + + P+ L + +
Sbjct: 1566 SSRPPPPFTTHSPPTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTLPTHVPPFSTSLVT 1625
Query: 414 DLIEKELSVQDQPSLSPTSLQNSSSHT----TTAKGPGSGFLHPAAATNANSLNSTFSVL 469
++ + S+ + + T TT K GS P + + S L
Sbjct: 1626 PSTHTVITPTHAQMATSASIHSMPTGTIPPPTTLKATGSTHTAPTMTLTTSGTSQALSSL 1685
Query: 470 PQRFPQFQQHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQH 529
H + S + +A S N T NPTS PP
Sbjct: 1686 NTAKTSTSLHS--HTSSTHHAEAT----------STSTTNITPNPTSTGT------PPMT 1727
Query: 530 NTGLGGIPVAGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQT-----HHSA 584
T G +++ S + H + T P+ + T H ++
Sbjct: 1728 VTTSGTSQSRSSFSTAKTSTSLHSHTSSTHHPEVTSTSTTSITPNHTSTGTRTPVAHTTS 1787
Query: 585 PFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH 639
S+++P + + PP+ + S P T+F+ + PT +TL H
Sbjct: 1788 ATSSRLP---TPFTTHSPPTGTTPISSTGPVTATSFQTTTTYPTPSHPHTTLPTH 1839
Score = 30.0 bits (66), Expect = 6.8
Identities = 46/208 (22%), Positives = 76/208 (36%), Gaps = 27/208 (12%)
Query: 250 NFLQLSTGSVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDT---------PSPP 300
+++ S S + V S + P S ++ +G +S ++ T PS P
Sbjct: 2143 SYVPSSHSSPQTSSPSVGTSSSFVSAPVHSTTLSSGSHSSLSTHPTTASVSASPLFPSSP 2202
Query: 301 PGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD 360
+ +P H+ SPF + S + + + + S FPS+P+T++
Sbjct: 2203 AASTTIRATLP-----HTISSPFTLSALLPISTVTVSPTPSSHLASSTIAFPSTPRTTAS 2257
Query: 361 WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKEL 420
TAP S S T +S T GF S + P +
Sbjct: 2258 THTAPAFSS--QSTTSRSTSLTTRVPTSGFVSLTSGVTGIPTSP-----------VTNLT 2304
Query: 421 SVQDQPSLSPTSLQNSSSHTTTAKGPGS 448
+ P+LSPT+ +SS T P S
Sbjct: 2305 TRHPGPTLSPTTRFLTSSLTAHGSTPAS 2332
Score = 29.6 bits (65), Expect = 8.9
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 280 LSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEGAVTESQSLFSDNFR 339
+++ SQ S+ T + S+ +P +SS+ SP + S +
Sbjct: 2064 MTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNSSSRPPSSPITTQLPHLSSATTP-VS 2122
Query: 340 HPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSS 381
N + S P PS+P T S + + +S ++ SSS
Sbjct: 2123 TTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQTSSPSVGTSSS 2164
>gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]
Length = 587
Score = 38.1 bits (87), Expect = 0.025
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 564 LQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPP 623
L A T GPS S T HS+P ST L S ++FHS P T P
Sbjct: 196 LPASTTTSGPSQE-STTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPD 254
Query: 624 SKTPTDLLQSST 635
S T + ++++ST
Sbjct: 255 STTSSGIVEAST 266
Score = 37.0 bits (84), Expect = 0.056
Identities = 87/390 (22%), Positives = 135/390 (34%), Gaps = 40/390 (10%)
Query: 265 KVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFE 324
K T S P+ +LS + +S S T PG S H+ P +
Sbjct: 124 KSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPG------------STHTTAFP-D 170
Query: 325 GAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDW 384
T S S H +P + P+S TS + S S +S +
Sbjct: 171 STTTPGLSRHSTT-SHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGSTT 229
Query: 385 QAAFG-----FGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSH 439
+FG F SS F P T + +E V T+L +SS
Sbjct: 230 ALSFGQESTTFHSSPGSTHTTLF-PDSTTSSGI---VEASTRVHSSTGSPRTTLSPASST 285
Query: 440 TTTAKGPGSGF-LHPAAATNANSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWM 498
+ +G + F HPA+ S ST + + + + + FP +
Sbjct: 286 SPGLQGESTAFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFPASSTTSGHS 345
Query: 499 AFPRNSIMHLNHTANPT--SNSNFLDLNLPPQHNTGL---GGIPVAGIPASSGNSLDSLQ 553
+++I H + A+ T S+++ + + +T G P S+ S S Q
Sbjct: 346 E--KSTIFHSSPDASGTTPSSAHSTTSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLS-Q 402
Query: 554 DDNPPHWLK-----SLQALTEMDGPSAAP---SQTHHSAPFSTQIPLHRASWNPYPPPSN 605
+ H + +L G +AAP S T+HS P ST AS
Sbjct: 403 EPTTSHSSQGSTEATLDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEE 462
Query: 606 PSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++ HS P +T P S T L + ST
Sbjct: 463 STTVHSSPGSTETTALPGSTTTAGLSEKST 492
>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
Length = 456
Score = 38.1 bits (87), Expect = 0.025
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 564 LQALTEMDGPSAAPSQTHHSAPFSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPP 623
L A T GPS S T HS+P ST L S ++FHS P T P
Sbjct: 90 LPASTTTSGPSQE-STTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPD 148
Query: 624 SKTPTDLLQSST 635
S T + ++++ST
Sbjct: 149 STTSSGIVEAST 160
Score = 37.0 bits (84), Expect = 0.056
Identities = 87/390 (22%), Positives = 135/390 (34%), Gaps = 40/390 (10%)
Query: 265 KVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFE 324
K T S P+ +LS + +S S T PG S H+ P +
Sbjct: 18 KSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPG------------STHTTAFP-D 64
Query: 325 GAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSDWPTAPEPQSLFTSETIPVSSSTDW 384
T S S H +P + P+S TS + S S +S +
Sbjct: 65 STTTPGLSRHSTT-SHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGSTT 123
Query: 385 QAAFG-----FGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQDQPSLSPTSLQNSSSH 439
+FG F SS F P T + +E V T+L +SS
Sbjct: 124 ALSFGQESTTFHSSPGSTHTTLF-PDSTTSSGI---VEASTRVHSSTGSPRTTLSPASST 179
Query: 440 TTTAKGPGSGF-LHPAAATNANSLNSTFSVLPQRFPQFQQHRAVYNSFSFPGQAARYPWM 498
+ +G + F HPA+ S ST + + + + + FP +
Sbjct: 180 SPGLQGESTAFQTHPASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFPASSTTSGHS 239
Query: 499 AFPRNSIMHLNHTANPT--SNSNFLDLNLPPQHNTGL---GGIPVAGIPASSGNSLDSLQ 553
+++I H + A+ T S+++ + + +T G P S+ S S Q
Sbjct: 240 E--KSTIFHSSPDASGTTPSSAHSTTSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLS-Q 296
Query: 554 DDNPPHWLK-----SLQALTEMDGPSAAP---SQTHHSAPFSTQIPLHRASWNPYPPPSN 605
+ H + +L G +AAP S T+HS P ST AS
Sbjct: 297 EPTTSHSSQGSTEATLDTTPSPPGTTAAPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEE 356
Query: 606 PSSFHSPPPGFQTAFRPPSKTPTDLLQSST 635
++ HS P +T P S T L + ST
Sbjct: 357 STTVHSSPGSTETTALPGSTTTAGLSEKST 386
>gi|26667219 eyes absent 1 isoform c [Homo sapiens]
Length = 557
Score = 38.1 bits (87), Expect = 0.025
Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 35/241 (14%)
Query: 269 LQSPIDKPSDSLSIGNGD---NSQQISNSDTPSPPPGLSKSNPVIPISSSNHSARSPFEG 325
L SP + S S +G NS SNS TP+ K+ P+ SS+ +A + +G
Sbjct: 6 LTSPHSRLSGSSESPSGPKLGNSHINSNSMTPNGTE--VKTEPM----SSSETASTTADG 59
Query: 326 AVTE-SQSLFSDNFRHPNPIPSGLPP--FPSSPQTSSDWPTAPEPQSLFTSETIPVSSST 382
++ S S + P P PP +PS+ PT P S + +T
Sbjct: 60 SLNNFSGSAIGSSSFSPRPTHQFSPPQIYPSNRPYPHILPT---PSSQTMAAYGQTQFTT 116
Query: 383 DWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIEKELSVQD------------QPSLSP 430
Q A + + QP G + + K L + + Q QP +P
Sbjct: 117 GMQQATAYATYPQPGQPYGISSYGI--KTEGGLSQSQSPGQTGFLSYGTSFSTPQPGQAP 174
Query: 431 TSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVLPQRFPQF--QQHRAVYNSFSF 488
S Q S TT+ G +G + TN++ NS+ P +P F Q+ YNS +
Sbjct: 175 YSYQMQGSSFTTSSGIYTG---NNSLTNSSGFNSSQQDYPS-YPSFGQGQYAQYYNSSPY 230
Query: 489 P 489
P
Sbjct: 231 P 231
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 38.1 bits (87), Expect = 0.025
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 426 PSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTFSVL------PQRFPQFQQH 479
PSL P+S +SSS ++ + PG H A ++++SL L PQ PQ +
Sbjct: 481 PSLPPSSSSSSSSSSSAPQRPGGPTTHGDAPSSSSSLAEAQPPLAAPPQKPQPHPQLNKS 540
Query: 480 RAVYNSFSF 488
+++ N+FSF
Sbjct: 541 QSLTNAFSF 549
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,240,341
Number of Sequences: 37866
Number of extensions: 1669567
Number of successful extensions: 10262
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 397
Number of HSP's that attempted gapping in prelim test: 9200
Number of HSP's gapped (non-prelim): 1487
length of query: 639
length of database: 18,247,518
effective HSP length: 109
effective length of query: 530
effective length of database: 14,120,124
effective search space: 7483665720
effective search space used: 7483665720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.