PRDM1 26295

Name: PRDM1	Sequence: fasta or formatted (691aa)		NCBI GI: 33946274
Description: PR domain containing 1, with ZNF domain isoform 2		Referenced in: Interferon Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [825aa] PR domain containing 1, with ZNF domain isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 41 3 C cysteine 2.7 19 1 D aspartate 3.2 22 2 E glutamate 6.1 42 2 F phenylalanine 2.9 20 1 G glycine 5.5 38 3 H histidine 4.1 28 2 I isoleucine 3.2 22 1 K lysine 7.2 50 2 L leucine 10.0 69 2 M methionine 2.3 16 2 N asparagine 5.4 37 2 P proline 10.0 69 2 Q glutamine 3.0 21 1 R arginine 4.6 32 3 S serine 10.0 69 3 T threonine 4.6 32 2 V valine 4.8 33 2 W tryptophan 0.3 2 1 Y tyrosine 4.2 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PR domain containing 1, with ZNF domain isoform 2 [H... PRDM1 0.996 PR domain containing 1, with ZNF domain isoform 1 [... ZNF683 0.150 zinc finger protein 683 ZNF683 0.150 zinc finger protein 683 ZSCAN22 0.097 zinc finger and SCAN domain containing 22 ZNF233 0.097 zinc finger protein 233 ZNF678 0.095 zinc finger protein 678 ZNF235 0.095 zinc finger protein 93 homolog ZNF234 0.094 zinc finger protein 234 ZNF234 0.094 zinc finger protein 234 ZNF83 0.094 zinc finger protein 83 isoform a ZNF83 0.094 zinc finger protein 83 isoform a ZNF83 0.094 zinc finger protein 83 isoform a ZNF83 0.094 zinc finger protein 83 isoform a ZNF83 0.094 zinc finger protein 83 isoform a ZFP28 0.094 zinc finger protein 28 ZNF845 0.094 zinc finger protein 845 ZNF468 0.094 zinc finger protein ZNF468 isoform 1 ZNF227 0.094 zinc finger protein 227 ZNF468 0.094 zinc finger protein ZNF468 isoform 2 ZNF239 0.093 zinc finger protein 239 ZNF239 0.093 zinc finger protein 239 ZNF239 0.093 zinc finger protein 239 ZNF239 0.093 zinc finger protein 239 ZFP112 0.092 zinc finger protein 228 isoform 1 ZFP112 0.092 zinc finger protein 228 isoform 2 ZNF214 0.092 zinc finger protein 214 ZNF677 0.092 zinc finger protein 677 ZNF45 0.092 zinc finger protein 45 ZNF267 0.092 zinc finger protein 267 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.