Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZBTB17 Sequence: fasta or formatted (803aa) NCBI GI: 167234429
Description:

zinc finger and BTB domain containing 17

Referenced in:

Myc and Related Functions
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         76           3
 C cysteine            4.1         33           1
 D aspartate           4.9         39           2
 E glutamate           9.7         78           3
 F phenylalanine       3.0         24           1
 G glycine             7.7         62           2
 H histidine           5.0         40           2
 I isoleucine          3.0         24           3
 K lysine              7.1         57           2
 L leucine             7.1         57           2
 M methionine          1.2         10           1
 N asparagine          2.5         20           1
 P proline             5.1         41           3
 Q glutamine           5.5         44           2
 R arginine            4.7         38           1
 S serine              6.5         52           2
 T threonine           5.5         44           2
 V valine              6.0         48           2
 W tryptophan          0.1          1           1
 Y tyrosine            1.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 17 
ZNF726                0.218   PREDICTED: zinc finger protein 726 
ZNF726                0.218   PREDICTED: zinc finger protein 726 
ZNF726                0.218   PREDICTED: zinc finger protein 726 
ZNF43                 0.209   zinc finger protein 43 
ZNF595                0.204   zinc finger protein 595 
ZNF429                0.204   zinc finger protein 429 
ZNF502                0.204   zinc finger protein 502 
ZNF502                0.204   zinc finger protein 502 
ZNF502                0.204   zinc finger protein 502 
ZNF502                0.204   zinc finger protein 502 
ZNF85                 0.202   zinc finger protein 85 
ZNF678                0.202   zinc finger protein 678 
ZNF420                0.202   zinc finger protein 420 
ZNF93                 0.201   zinc finger protein 93 
ZNF91                 0.201   zinc finger protein 91 
ZNF208                0.201   zinc finger protein 208 
ZNF160                0.200   zinc finger protein 160 
ZNF160                0.200   zinc finger protein 160 
ZNF160                0.200   zinc finger protein 160 
LOC100292052          0.199   PREDICTED: similar to hCG1773661 
LOC100287226          0.199   PREDICTED: similar to hCG1773661 
LOC100287226          0.199   PREDICTED: hypothetical protein XP_002343677 
ZNF98                 0.199   zinc finger protein 98 
ZNF665                0.199   zinc finger protein 665 
ZNF551                0.198   zinc finger protein 551 
ZNF492                0.197   zinc finger protein 492 
ZSCAN2                0.197   zinc finger protein 29 isoform 1 
ZNF254                0.197   zinc finger protein 254 
ZNF16                 0.197   zinc finger protein 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press