PRDM2 12246

Name: PRDM2	Sequence: fasta or formatted (226aa)		NCBI GI: 208022698
Description: retinoblastoma protein-binding zinc finger protein isoform d		Referenced in: RB1 and Related Functions Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [1718aa] retinoblastoma protein-binding zinc finger protein isoform a alt prot [1682aa] retinoblastoma protein-binding zinc finger protein isoform b alt prot [1481aa] retinoblastoma protein-binding zinc finger protein isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 19 3 C cysteine 1.3 3 1 D aspartate 3.1 7 1 E glutamate 8.4 19 3 F phenylalanine 1.8 4 1 G glycine 5.8 13 1 H histidine 1.8 4 1 I isoleucine 4.0 9 1 K lysine 7.5 17 3 L leucine 7.1 16 2 M methionine 1.3 3 1 N asparagine 5.3 12 2 P proline 8.0 18 1 Q glutamine 3.1 7 1 R arginine 7.1 16 1 S serine 8.4 19 2 T threonine 5.3 12 2 V valine 5.8 13 1 W tryptophan 3.5 8 1 Y tyrosine 3.1 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinoblastoma protein-binding zinc finger protein ... PRDM2 0.742 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.742 retinoblastoma protein-binding zinc finger protein i... PRDM9 0.143 PR domain containing 9 PRDM7 0.137 PR domain containing 7 isoform 1 PRDM6 0.123 PR domain containing 6 PRDM1 0.121 PR domain containing 1, with ZNF domain isoform 1 [... PRDM12 0.112 PR domain containing 12 PRDM16 0.112 PR domain containing 16 isoform 2 PRDM16 0.112 PR domain containing 16 isoform 1 PRDM5 0.110 PR domain containing 5 PRDM14 0.099 PR domain containing 14 EVI1 0.094 ecotropic viral integration site 1 isoform a LOC100290519 0.083 PREDICTED: hypothetical protein XP_002346939 PRDM11 0.083 PR domain containing 11 PRDM4 0.083 PR domain containing 4 PRDM1 0.076 PR domain containing 1, with ZNF domain isoform 2 [H... PRDM15 0.076 PR domain containing 15 isoform 2 PRDM15 0.076 PR domain containing 15 isoform 1 PRDM10 0.056 PR domain containing 10 isoform 2 PRDM10 0.056 PR domain containing 10 isoform 4 PRDM10 0.056 PR domain containing 10 isoform 1 PRDM10 0.056 PR domain containing 10 isoform 3 ZNF408 0.052 zinc finger protein 408 MDS1 0.049 myelodysplasia syndrome protein 1 PRDM8 0.045 PR domain containing 8 PRDM8 0.045 PR domain containing 8 PRDM7 0.040 PR domain containing 7 isoform 2 PRDM13 0.029 PR domain containing 13 NKTR 0.020 natural killer-tumor recognition sequence Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.