Guide to the Human Genome
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Name: ZNF840 Sequence: fasta or formatted (980aa) NCBI GI: 169215032
Description:

PREDICTED: zinc finger protein 840

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [980aa] PREDICTED: zinc finger protein 840
alt mRNA [980aa] PREDICTED: zinc finger protein 840
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         52           4
 C cysteine            4.9         48           1
 D aspartate           2.1         21           2
 E glutamate           5.0         49           2
 F phenylalanine       6.0         59           2
 G glycine             5.6         55           3
 H histidine           6.5         64           2
 I isoleucine          3.4         33           1
 K lysine              9.6         94           3
 L leucine             7.6         74           3
 M methionine          2.0         20           2
 N asparagine          5.0         49           3
 P proline             4.6         45           2
 Q glutamine           4.8         47           2
 R arginine            4.9         48           1
 S serine              7.0         69           3
 T threonine           6.8         67           2
 V valine              5.4         53           2
 W tryptophan          0.9          9           1
 Y tyrosine            2.4         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: zinc finger protein 840 
ZNF840                1.000   PREDICTED: zinc finger protein 840 
ZNF840                1.000   PREDICTED: zinc finger protein 840 
ZNF184                0.276   zinc finger protein 184 
ZNF420                0.275   zinc finger protein 420 
ZNF780B               0.270   zinc finger protein 780B 
ZNF347                0.267   zinc finger protein 347 
ZNF585B               0.265   zinc finger protein 585B 
ZNF160                0.264   zinc finger protein 160 
ZNF160                0.264   zinc finger protein 160 
ZNF160                0.264   zinc finger protein 160 
ZNF43                 0.263   zinc finger protein 43 
ZNF845                0.262   zinc finger protein 845 
ZNF546                0.261   zinc finger protein 546 
ZNF208                0.261   zinc finger protein 208 
ZNF624                0.261   zinc finger protein 624 
ZNF836                0.260   zinc finger protein 836 
ZNF665                0.260   zinc finger protein 665 
ZNF91                 0.259   zinc finger protein 91 
ZNF595                0.256   zinc finger protein 595 
ZNF616                0.256   zinc finger protein 616 
LOC100287429          0.255   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.255   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.255   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.255   zinc finger protein 84 
ZNF84                 0.255   zinc finger protein 84 
LOC100292052          0.254   PREDICTED: similar to hCG1773661 
LOC100287226          0.254   PREDICTED: similar to hCG1773661 
LOC100287226          0.254   PREDICTED: hypothetical protein XP_002343677 
ZNF569                0.253   zinc finger protein 569 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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