PRDM1 9574

Name: PRDM1	Sequence: fasta or formatted (825aa)		NCBI GI: 172072684
Description: PR domain containing 1, with ZNF domain isoform 1		Referenced in: Interferon Kruppel-related Zinc Finger Proteins
Other entries for this name: alt prot [691aa] PR domain containing 1, with ZNF domain isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 51 3 C cysteine 2.7 22 1 D aspartate 3.6 30 2 E glutamate 6.4 53 2 F phenylalanine 3.0 25 1 G glycine 5.9 49 3 H histidine 3.5 29 2 I isoleucine 3.4 28 1 K lysine 7.2 59 2 L leucine 9.5 78 2 M methionine 2.5 21 2 N asparagine 5.3 44 2 P proline 9.1 75 2 Q glutamine 2.8 23 1 R arginine 4.6 38 3 S serine 9.2 76 3 T threonine 5.5 45 2 V valine 4.8 40 2 W tryptophan 0.6 5 1 Y tyrosine 4.1 34 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PR domain containing 1, with ZNF domain isoform 1 [... PRDM1 0.833 PR domain containing 1, with ZNF domain isoform 2 [H... ZNF683 0.125 zinc finger protein 683 ZNF683 0.125 zinc finger protein 683 ZSCAN22 0.081 zinc finger and SCAN domain containing 22 ZNF233 0.081 zinc finger protein 233 ZNF678 0.080 zinc finger protein 678 ZNF235 0.079 zinc finger protein 93 homolog ZNF234 0.078 zinc finger protein 234 ZNF234 0.078 zinc finger protein 234 ZNF83 0.078 zinc finger protein 83 isoform a ZNF83 0.078 zinc finger protein 83 isoform a ZNF83 0.078 zinc finger protein 83 isoform a ZNF83 0.078 zinc finger protein 83 isoform a ZNF83 0.078 zinc finger protein 83 isoform a ZFP28 0.078 zinc finger protein 28 ZNF845 0.078 zinc finger protein 845 ZNF468 0.078 zinc finger protein ZNF468 isoform 1 ZNF227 0.078 zinc finger protein 227 ZNF468 0.078 zinc finger protein ZNF468 isoform 2 ZNF239 0.078 zinc finger protein 239 ZNF239 0.078 zinc finger protein 239 ZNF239 0.078 zinc finger protein 239 ZNF239 0.078 zinc finger protein 239 ZFP112 0.077 zinc finger protein 228 isoform 1 ZFP112 0.077 zinc finger protein 228 isoform 2 ZNF214 0.077 zinc finger protein 214 ZNF677 0.077 zinc finger protein 677 ZNF45 0.077 zinc finger protein 45 ZNF267 0.077 zinc finger protein 267 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.