Guide to the Human Genome
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Name: BCL6B Sequence: fasta or formatted (480aa) NCBI GI: 32469511
Description:

B-cell CLL/lymphoma 6, member B (zinc finger protein)

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         40           3
 C cysteine            4.0         19           1
 D aspartate           2.5         12           1
 E glutamate           4.8         23           2
 F phenylalanine       3.1         15           2
 G glycine             8.8         42           2
 H histidine           4.8         23           1
 I isoleucine          2.5         12           1
 K lysine              4.0         19           2
 L leucine             8.8         42           2
 M methionine          0.6          3           1
 N asparagine          1.9          9           1
 P proline            10.2         49           3
 Q glutamine           4.0         19           1
 R arginine            7.1         34           2
 S serine             11.7         56          12
 T threonine           5.2         25           1
 V valine              4.6         22           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell CLL/lymphoma 6, member B (zinc finger protein... 
BCL6                  0.326   B-cell lymphoma 6 protein isoform 1 
BCL6                  0.326   B-cell lymphoma 6 protein isoform 1 
BCL6                  0.277   B-cell lymphoma 6 protein isoform 2 
ZBTB17                0.183   zinc finger and BTB domain containing 17 
ZBTB7B                0.162   zinc finger and BTB domain containing 7B 
LOC100293130          0.162   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.162   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.162   PREDICTED: similar to kruppel-related zinc finger p...
ZNF233                0.153   zinc finger protein 233 
ZNF845                0.152   zinc finger protein 845 
ZNF726                0.151   PREDICTED: zinc finger protein 726 
ZNF726                0.151   PREDICTED: zinc finger protein 726 
ZNF726                0.151   PREDICTED: zinc finger protein 726 
ZNF227                0.150   zinc finger protein 227 
ZNF510                0.149   zinc finger protein 510 
ZNF85                 0.149   zinc finger protein 85 
ZNF235                0.148   zinc finger protein 93 homolog 
ZNF675                0.148   zinc finger protein 675 
ZNF658                0.148   zinc finger protein 658 
ZNF383                0.148   zinc finger protein 383 
ZNF214                0.148   zinc finger protein 214 
ZNF234                0.147   zinc finger protein 234 
ZNF234                0.147   zinc finger protein 234 
LOC646864             0.147   PREDICTED: similar to hCG36734 
LOC646864             0.147   PREDICTED: similar to hCG36734 
LOC646864             0.147   PREDICTED: similar to hCG36734 
ZNF782                0.147   zinc finger protein 782 
ZNF681                0.147   zinc finger protein 681 
ZNF429                0.146   zinc finger protein 429 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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