Guide to the Human Genome
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Name: ZNF454 Sequence: fasta or formatted (522aa) NCBI GI: 32699015
Description:

zinc finger protein 454

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         27           1
 C cysteine            5.4         28           1
 D aspartate           2.1         11           1
 E glutamate           8.6         45           3
 F phenylalanine       4.6         24           1
 G glycine             5.4         28           2
 H histidine           7.5         39           3
 I isoleucine          5.0         26           1
 K lysine              9.8         51           2
 L leucine             5.7         30           2
 M methionine          1.3          7           1
 N asparagine          4.2         22           1
 P proline             4.0         21           1
 Q glutamine           6.1         32           1
 R arginine            4.8         25           1
 S serine              8.2         43           4
 T threonine           5.9         31           1
 V valine              2.7         14           2
 W tryptophan          1.1          6           1
 Y tyrosine            2.3         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 454 
ZNF135                0.485   zinc finger protein 135 
ZNF184                0.482   zinc finger protein 184 
DKFZp686E2433         0.465   hypothetical protein LOC345462 
ZNF570                0.459   zinc finger protein 570 
ZNF470                0.457   zinc finger protein 470 
ZNF583                0.456   zinc finger protein 583 
ZNF583                0.456   zinc finger protein 583 
ZNF583                0.456   zinc finger protein 583 
ZNF420                0.449   zinc finger protein 420 
ZNF565                0.445   zinc finger protein 565 
ZNF565                0.445   zinc finger protein 565 
ZNF471                0.444   zinc finger protein 471 
ZNF283                0.440   zinc finger protein 283 
ZFP14                 0.439   zinc finger protein 14-like 
ZNF624                0.434   zinc finger protein 624 
ZNF160                0.434   zinc finger protein 160 
ZNF160                0.434   zinc finger protein 160 
ZNF160                0.434   zinc finger protein 160 
ZNF383                0.432   zinc finger protein 383 
ZNF287                0.432   zinc finger protein 287 
ZNF250                0.431   zinc finger protein 250 isoform a 
ZNF250                0.431   zinc finger protein 250 isoform b 
ZNF480                0.430   zinc finger protein 480 
ZNF543                0.430   zinc finger protein 543 
LOC400713             0.430   zinc finger protein LOC400713 
ZFP30                 0.430   zinc finger protein 30 homolog 
ZNF85                 0.429   zinc finger protein 85 
ZNF347                0.428   zinc finger protein 347 
ZNF34                 0.428   zinc finger protein 34 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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