Guide to the Human Genome
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Name: WDR31 Sequence: fasta or formatted (367aa) NCBI GI: 59938780
Description:

WD repeat domain 31 isoform 1

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [366aa] WD repeat domain 31 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         24           2
 C cysteine            4.4         16           1
 D aspartate           4.9         18           1
 E glutamate           4.1         15           2
 F phenylalanine       3.5         13           2
 G glycine             6.5         24           2
 H histidine           3.8         14           1
 I isoleucine          3.5         13           2
 K lysine              5.4         20           1
 L leucine             9.8         36           3
 M methionine          2.7         10           2
 N asparagine          2.5          9           1
 P proline             3.5         13           2
 Q glutamine           6.0         22           2
 R arginine            5.4         20           1
 S serine              9.3         34           2
 T threonine           5.7         21           1
 V valine              8.4         31           2
 W tryptophan          1.9          7           1
 Y tyrosine            1.9          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 31 isoform 1 
WDR31                 0.990   WD repeat domain 31 isoform 3 
WDR38                 0.090   WD repeat domain 38 
WDR51A                0.081   WD repeat domain 51A isoform 2 
WDR51A                0.081   WD repeat domain 51A isoform 1 
WDR69                 0.081   WD repeat domain 69 
WDR5                  0.078   WD repeat domain 5 
WDR5                  0.078   WD repeat domain 5 
GNB2L1                0.073   guanine nucleotide binding protein (G protein), beta ...
PLRG1                 0.073   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
PAFAH1B1              0.071   platelet-activating factor acetylhydrolase, isoform I...
PRPF19                0.071   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
TAF5L                 0.070   PCAF associated factor 65 beta isoform a 
SNRNP40               0.068   WD repeat domain 57 (U5 snRNP specific) 
WDR51A                0.068   WD repeat domain 51A isoform 3 
WDR5B                 0.067   WD repeat domain 5B 
NLE1                  0.067   Notchless gene homolog isoform a 
ATG16L2               0.066   ATG16 autophagy related 16-like 2 
TAF5                  0.064   TBP-associated factor 5 
WDR51B                0.064   WD repeat domain 51B 
PEX7                  0.063   peroxisomal biogenesis factor 7 
COPB2                 0.058   coatomer protein complex, subunit beta 2 (beta prime)...
KATNB1                0.056   katanin p80 subunit B 1 
APAF1                 0.056   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.056   apoptotic peptidase activating factor 1 isoform b [Ho...
MORG1                 0.056   mitogen-activated protein kinase organizer 1 
MORG1                 0.056   mitogen-activated protein kinase organizer 1 
WSB2                  0.056   WD SOCS-box protein 2 
WDR77                 0.055   WD repeat domain 77 
TBL1Y                 0.053   transducin beta-like 1Y 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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