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Search of human proteins with 5454034
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]
(92 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5454034 S100 calcium-binding protein, beta [Homo sapiens] 189 5e-49
gi|5454032 S100 calcium binding protein A1 [Homo sapiens] 110 2e-25
gi|5174663 S100 calcium binding protein P [Homo sapiens] 98 2e-21
gi|9845516 S100 calcium-binding protein A4 [Homo sapiens] 93 5e-20
gi|4506765 S100 calcium-binding protein A4 [Homo sapiens] 93 5e-20
gi|5174661 S100 calcium binding protein A2 [Homo sapiens] 91 3e-19
gi|150010678 S100 calcium binding protein Z [Homo sapiens] 88 2e-18
gi|4506767 S100 calcium binding protein A5 [Homo sapiens] 78 2e-15
gi|5032059 S100 calcium-binding protein A12 [Homo sapiens] 77 2e-15
gi|5032057 S100 calcium binding protein A11 [Homo sapiens] 74 3e-14
gi|4506773 S100 calcium-binding protein A9 [Homo sapiens] 72 7e-14
gi|62122917 filaggrin family member 2 [Homo sapiens] 71 2e-13
gi|7657532 S100 calcium-binding protein A6 [Homo sapiens] 71 2e-13
gi|4506763 S100 calcium binding protein A3 [Homo sapiens] 68 1e-12
gi|4506761 S100 calcium binding protein A10 [Homo sapiens] 68 2e-12
gi|171916097 repetin [Homo sapiens] 67 4e-12
gi|57864582 hornerin [Homo sapiens] 63 4e-11
gi|148746195 trichohyalin [Homo sapiens] 61 2e-10
gi|17933772 S100 calcium binding protein A16 [Homo sapiens] 60 5e-10
gi|60097902 filaggrin [Homo sapiens] 57 2e-09
gi|21614544 S100 calcium-binding protein A8 [Homo sapiens] 57 3e-09
gi|7706635 cornulin [Homo sapiens] 54 3e-08
gi|4757898 calbindin 3 [Homo sapiens] 52 8e-08
gi|66737374 S100 calcium binding protein A13 [Homo sapiens] 49 7e-07
gi|66737372 S100 calcium binding protein A13 [Homo sapiens] 49 7e-07
gi|66737370 S100 calcium binding protein A13 [Homo sapiens] 49 7e-07
gi|66737368 S100 calcium binding protein A13 [Homo sapiens] 49 7e-07
gi|5174659 S100 calcium binding protein A13 [Homo sapiens] 49 7e-07
gi|28827815 S100 calcium binding protein A7-like 1 [Homo sapiens] 48 1e-06
gi|239756890 PREDICTED: similar to S100 calcium binding protein ... 47 3e-06
>gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]
Length = 92
Score = 189 bits (479), Expect = 5e-49
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET
Sbjct: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 92
LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE
Sbjct: 61 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 92
>gi|5454032 S100 calcium binding protein A1 [Homo sapiens]
Length = 94
Score = 110 bits (275), Expect = 2e-25
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 2 SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61
SELE AM LI+VFH +SG+EGDK+KL K ELKEL+ ELS FL+ K+ + VDKVM+ L
Sbjct: 3 SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
Query: 62 DNDGDGECDFQEFMAFVAMVTTACHEFF 89
D +GDGE DFQE++ VA +T AC+ FF
Sbjct: 63 DENGDGEVDFQEYVVLVAALTVACNNFF 90
>gi|5174663 S100 calcium binding protein P [Homo sapiens]
Length = 95
Score = 97.8 bits (242), Expect = 2e-21
Identities = 46/90 (51%), Positives = 64/90 (71%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
M+ELE AM +IDVF +YSG EG L K ELK L+ EL FL+ K+++ VDK+++
Sbjct: 1 MTELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKD 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACHEFFE 90
LD +GD + DF EF+ FVA +T+ACH++FE
Sbjct: 61 LDANGDAQVDFSEFIVFVAAITSACHKYFE 90
>gi|9845516 S100 calcium-binding protein A4 [Homo sapiens]
Length = 101
Score = 92.8 bits (229), Expect = 5e-20
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 4 LEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDN 63
LEKA+ ++ FH+YSG+EGDK KL KSELKEL+ EL FL + ++ K+M LD+
Sbjct: 5 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 64
Query: 64 DGDGECDFQEFMAFVAMVTTACHEFFE 90
+ D E DFQE+ F++ + C+EFFE
Sbjct: 65 NRDNEVDFQEYCVFLSCIAMMCNEFFE 91
>gi|4506765 S100 calcium-binding protein A4 [Homo sapiens]
Length = 101
Score = 92.8 bits (229), Expect = 5e-20
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 4 LEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDN 63
LEKA+ ++ FH+YSG+EGDK KL KSELKEL+ EL FL + ++ K+M LD+
Sbjct: 5 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 64
Query: 64 DGDGECDFQEFMAFVAMVTTACHEFFE 90
+ D E DFQE+ F++ + C+EFFE
Sbjct: 65 NRDNEVDFQEYCVFLSCIAMMCNEFFE 91
>gi|5174661 S100 calcium binding protein A2 [Homo sapiens]
Length = 97
Score = 90.5 bits (223), Expect = 3e-19
Identities = 40/89 (44%), Positives = 63/89 (70%)
Query: 2 SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61
S LE+A+ L+ FH+YS +EGDK KL K E+KEL++ EL F+ E ++E + K+M +L
Sbjct: 3 SSLEQALAVLVTTFHKYSCQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSL 62
Query: 62 DNDGDGECDFQEFMAFVAMVTTACHEFFE 90
D + D + DFQE+ F+A++T C++FF+
Sbjct: 63 DENSDQQVDFQEYAVFLALITVMCNDFFQ 91
>gi|150010678 S100 calcium binding protein Z [Homo sapiens]
Length = 99
Score = 87.8 bits (216), Expect = 2e-18
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 2 SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61
++LE AM +I +FH+YSG+E + KL K ELK L+ EL+ FL KE ++VDK+++ L
Sbjct: 3 TQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQDL 62
Query: 62 DNDGDGECDFQEFMAFVAMVTTACHEFF 89
D + D E DF EF+ VA +T AC+++F
Sbjct: 63 DANKDNEVDFNEFVVMVAALTVACNDYF 90
>gi|4506767 S100 calcium binding protein A5 [Homo sapiens]
Length = 110
Score = 77.8 bits (190), Expect = 2e-15
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 4 LEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDN 63
LEKA+ ++ FH+YSGREG K L + ELKELI EL L E+KE +D +M++LD
Sbjct: 23 LEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELC--LGEMKESS-IDDLMKSLDK 79
Query: 64 DGDGECDFQEFMAFVAMVTTACHEFF 89
+ D E DF+E+ F+ M+ A ++FF
Sbjct: 80 NSDQEIDFKEYSVFLTMLCMAYNDFF 105
>gi|5032059 S100 calcium-binding protein A12 [Homo sapiens]
Length = 92
Score = 77.4 bits (189), Expect = 2e-15
Identities = 34/86 (39%), Positives = 60/86 (69%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
M++LE+ + ++++FHQYS R+G L K ELK+L+ EL++ ++ IK++ V+D++ +
Sbjct: 1 MTKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQG 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACH 86
LD + D + DFQEF++ VA+ A H
Sbjct: 61 LDANQDEQVDFQEFISLVAIALKAAH 86
>gi|5032057 S100 calcium binding protein A11 [Homo sapiens]
Length = 105
Score = 73.6 bits (179), Expect = 3e-14
Identities = 32/88 (36%), Positives = 56/88 (63%)
Query: 2 SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61
+E E+ + +LI VF +Y+G++G + L K+E +N EL+ F + K+ V+D++M+ L
Sbjct: 8 TETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKL 67
Query: 62 DNDGDGECDFQEFMAFVAMVTTACHEFF 89
D + DG+ DF EF+ + + ACH+ F
Sbjct: 68 DTNSDGQLDFSEFLNLIGGLAMACHDSF 95
>gi|4506773 S100 calcium-binding protein A9 [Homo sapiens]
Length = 114
Score = 72.4 bits (176), Expect = 7e-14
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFL-EEIKEQEVVDKVME 59
MS+LE+ + +I+ FHQYS + G L + E KEL+ +L +FL +E K ++V++ +ME
Sbjct: 5 MSQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIME 64
Query: 60 TLDNDGDGECDFQEFMAFVAMVTTACHE 87
LD + D + F+EF+ +A +T A HE
Sbjct: 65 DLDTNADKQLSFEEFIMLMARLTWASHE 92
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 71.2 bits (173), Expect = 2e-13
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
M++L +++V +IDVF++Y+ ++G+ L K ELKEL+ EL L+ + + VD +M
Sbjct: 1 MTDLLRSVVTVIDVFYKYTKQDGECGTLSKGELKELLEKELHPVLKNPDDPDTVDVIMHM 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 92
LD D D DF EF+ + +T AC++ E
Sbjct: 61 LDRDHDRRLDFTEFLLMIFKLTMACNKVLSKE 92
>gi|7657532 S100 calcium-binding protein A6 [Homo sapiens]
Length = 90
Score = 70.9 bits (172), Expect = 2e-13
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 4 LEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDN 63
L++A+ L+ +FH+YSGREGDKH L K ELKELI EL+ ++++ E+ ++ME LD
Sbjct: 5 LDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELT-IGSKLQDAEIA-RLMEDLDR 62
Query: 64 DGDGECDFQEFMAFVAMVTTACHE 87
+ D E +FQE++ F+ + +E
Sbjct: 63 NKDQEVNFQEYVTFLGALALIYNE 86
>gi|4506763 S100 calcium binding protein A3 [Homo sapiens]
Length = 101
Score = 68.2 bits (165), Expect = 1e-12
Identities = 34/87 (39%), Positives = 55/87 (63%)
Query: 4 LEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDN 63
LE+A+ A++ F +Y+GR GDK+KL ++ELKEL+ EL+ + + +K M LD
Sbjct: 5 LEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 64
Query: 64 DGDGECDFQEFMAFVAMVTTACHEFFE 90
+ D E DF E++ +A + CHE+F+
Sbjct: 65 NKDCEVDFVEYVRSLACLCLYCHEYFK 91
>gi|4506761 S100 calcium binding protein A10 [Homo sapiens]
Length = 97
Score = 67.8 bits (164), Expect = 2e-12
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 2 SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61
S++E AM ++ FH+++G DK L K +L+ L+ E FLE K+ VDK+M+ L
Sbjct: 3 SQMEHAMETMMFTFHKFAG---DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDL 59
Query: 62 DNDGDGECDFQEFMAFVAMVTTACHEFF 89
D DG+ FQ F + +A +T AC+++F
Sbjct: 60 DQCRDGKVGFQSFFSLIAGLTIACNDYF 87
>gi|171916097 repetin [Homo sapiens]
Length = 784
Score = 66.6 bits (161), Expect = 4e-12
Identities = 31/92 (33%), Positives = 54/92 (58%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
M++L +++++IDVFH+Y+ GD L K ELK+L+ E L+ + E V+ ++
Sbjct: 1 MAQLLNSILSVIDVFHKYAKGNGDCALLCKEELKQLLLAEFGDILQRPNDPETVETILNL 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACHEFFEHE 92
LD D DG DF E++ V + AC+ +++
Sbjct: 61 LDQDRDGHIDFHEYLLLVFQLVQACYHKLDNK 92
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 63.2 bits (152), Expect = 4e-11
Identities = 28/84 (33%), Positives = 52/84 (61%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
M +L + ++ +IDVF+QY+ + G+ L K+ELKEL+ NE L+ + + VD ++++
Sbjct: 1 MPKLLQGVITVIDVFYQYATQHGEYDTLNKAELKELLENEFHQILKNPNDPDTVDIILQS 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTA 84
LD D + + DF E++ + + A
Sbjct: 61 LDRDHNKKVDFTEYLLMIFKLVQA 84
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 60.8 bits (146), Expect = 2e-10
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
MS L +++ + ++F+QY + D L K +LK L+ E L + + VD ++E
Sbjct: 1 MSPLLRSICDITEIFNQYVSHDCDGAALTKKDLKNLLEREFGAVLRRPHDPKTVDLILEL 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACH 86
LD D +G DF EF+ F+ V AC+
Sbjct: 61 LDLDSNGRVDFNEFLLFIFKVAQACY 86
>gi|17933772 S100 calcium binding protein A16 [Homo sapiens]
Length = 103
Score = 59.7 bits (143), Expect = 5e-10
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 2 SELEKAMVALIDVFHQYSGREG-DKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
+ELEKA++ L++ F++Y + K+K+ KS +E++ EL+H L + ++ DK+++
Sbjct: 6 TELEKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQN 65
Query: 61 LDNDGDGECDFQEFMAFVAMVT 82
LD + DG F E+ + +T
Sbjct: 66 LDANHDGRISFDEYWTLIGGIT 87
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 57.4 bits (137), Expect = 2e-09
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
MS L + + A+I++F QYS ++ + L K ELKEL+ E L+ + ++VD M+
Sbjct: 1 MSTLLENIFAIINLFKQYSKKDKNTDTLSKKELKELLEKEFRQILKNPDDPDMVDVFMDH 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACHE 87
LD D + + DF EF+ V + A +E
Sbjct: 61 LDIDHNKKIDFTEFLLMVFKLAQAYYE 87
>gi|21614544 S100 calcium-binding protein A8 [Homo sapiens]
Length = 93
Score = 57.0 bits (136), Expect = 3e-09
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
++ELEKA+ ++IDV+H+YS +G+ H + + +LK+L+ E ++ ++ D +
Sbjct: 2 LTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYI----RKKGADVWFKE 57
Query: 61 LDNDGDGECDFQEFMAFVAMVTTACHE 87
LD + DG +FQEF+ V + A H+
Sbjct: 58 LDINTDGAVNFQEFLILVIKMGVAAHK 84
>gi|7706635 cornulin [Homo sapiens]
Length = 495
Score = 53.9 bits (128), Expect = 3e-08
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
M +L + + +I+ F +Y+ EG+ L + ELK L+ E + + + + VD+V+
Sbjct: 1 MPQLLQNINGIIEAFRRYARTEGNCTALTRGELKRLLEQEFADVIVKPHDPATVDEVLRL 60
Query: 61 LDNDGDGECDFQEFMAFVAMVTTAC 85
LD D G +F+EF+ V V AC
Sbjct: 61 LDEDHTGTVEFKEFLVLVFKVAQAC 85
>gi|4757898 calbindin 3 [Homo sapiens]
Length = 79
Score = 52.4 bits (124), Expect = 8e-08
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 5 EKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDND 64
+K+ L +F +Y+ +EGD +L K ELK LI E F +K +D + + LD +
Sbjct: 4 KKSPEELKRIFEKYAAKEGDPDQLSKDELKLLIQAE---FPSLLKGPNTLDDLFQELDKN 60
Query: 65 GDGECDFQEFMAFVAMVT 82
GDGE F+EF V ++
Sbjct: 61 GDGEVSFEEFQVLVKKIS 78
>gi|66737374 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
++ELE+++ ++ F ++ +EG K L +E KEL+ +L H L+++ +D+ M++
Sbjct: 6 LTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGS---LDEKMKS 62
Query: 61 LDNDGDGECDFQEFMAFV 78
LD + D E F E+ +
Sbjct: 63 LDVNQDSELKFNEYWRLI 80
>gi|66737372 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
++ELE+++ ++ F ++ +EG K L +E KEL+ +L H L+++ +D+ M++
Sbjct: 6 LTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGS---LDEKMKS 62
Query: 61 LDNDGDGECDFQEFMAFV 78
LD + D E F E+ +
Sbjct: 63 LDVNQDSELKFNEYWRLI 80
>gi|66737370 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
++ELE+++ ++ F ++ +EG K L +E KEL+ +L H L+++ +D+ M++
Sbjct: 6 LTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGS---LDEKMKS 62
Query: 61 LDNDGDGECDFQEFMAFV 78
LD + D E F E+ +
Sbjct: 63 LDVNQDSELKFNEYWRLI 80
>gi|66737368 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
++ELE+++ ++ F ++ +EG K L +E KEL+ +L H L+++ +D+ M++
Sbjct: 6 LTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGS---LDEKMKS 62
Query: 61 LDNDGDGECDFQEFMAFV 78
LD + D E F E+ +
Sbjct: 63 LDVNQDSELKFNEYWRLI 80
>gi|5174659 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 49.3 bits (116), Expect = 7e-07
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 1 MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET 60
++ELE+++ ++ F ++ +EG K L +E KEL+ +L H L+++ +D+ M++
Sbjct: 6 LTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGS---LDEKMKS 62
Query: 61 LDNDGDGECDFQEFMAFV 78
LD + D E F E+ +
Sbjct: 63 LDVNQDSELKFNEYWRLI 80
>gi|28827815 S100 calcium binding protein A7-like 1 [Homo sapiens]
Length = 101
Score = 48.1 bits (113), Expect = 1e-06
Identities = 23/88 (26%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 2 SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEV--VDKVME 59
++ E++++ +ID+FH+Y+GR+G K++K L ++ +FL ++ + + V E
Sbjct: 4 TQAERSIIGMIDMFHKYTGRDG---KIEKPSLLTMMKENFPNFLSACDKKGIHYLATVFE 60
Query: 60 TLDNDGDGECDFQEFMAFVAMVTTACHE 87
D + D + DF EF++ + + H+
Sbjct: 61 KKDKNEDKKIDFSEFLSLLGDIAADYHK 88
>gi|239756890 PREDICTED: similar to S100 calcium binding protein A10
(annexin II ligand, calpactin I, light polypeptide
(p11)) [Homo sapiens]
Length = 370
Score = 47.4 bits (111), Expect = 3e-06
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 2 SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61
S +E M ++ FH+++G DK L K LK L+ E FLE K+ D M+ +
Sbjct: 266 SPMEHTMETVLFTFHRFAG---DKGYLMKEGLKVLMGKEFLGFLENQKDPLAADITMKDM 322
Query: 62 DNDGDGECDFQEFMAFVAMVTTACHEFF 89
D D +FQ + A +TT + +F
Sbjct: 323 DQCQDSTLNFQNLFSLTAGLTTVDNNYF 350
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,164,001
Number of Sequences: 37866
Number of extensions: 114237
Number of successful extensions: 884
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 700
Number of HSP's gapped (non-prelim): 200
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.