Guide to the Human Genome
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Name: S100A2 Sequence: fasta or formatted (97aa) NCBI GI: 5174661
Description:

S100 calcium binding protein A2

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1          4           1
 C cysteine            4.1          4           1
 D aspartate           7.2          7           1
 E glutamate          10.3         10           2
 F phenylalanine       7.2          7           2
 G glycine             6.2          6           1
 H histidine           2.1          2           1
 I isoleucine          1.0          1           1
 K lysine              9.3          9           2
 L leucine            12.4         12           2
 M methionine          4.1          4           1
 N asparagine          2.1          2           1
 P proline             3.1          3           1
 Q glutamine           6.2          6           2
 R arginine            1.0          1           1
 S serine              7.2          7           2
 T threonine           3.1          3           2
 V valine              7.2          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   S100 calcium binding protein A2 
S100A4                0.594   S100 calcium-binding protein A4 
S100A4                0.594   S100 calcium-binding protein A4 
S100A1                0.411   S100 calcium binding protein A1 
S100A5                0.377   S100 calcium binding protein A5 
S100B                 0.377   S100 calcium-binding protein, beta 
S100A6                0.354   S100 calcium-binding protein A6 
S100A3                0.343   S100 calcium binding protein A3 
S100Z                 0.337   S100 calcium binding protein Z 
S100P                 0.326   S100 calcium binding protein P 
S100A10               0.240   S100 calcium binding protein A10 
S100A12               0.223   S100 calcium-binding protein A12 
S100A9                0.217   S100 calcium-binding protein A9 
FLG2                  0.211   filaggrin family member 2 
S100A11               0.189   S100 calcium binding protein A11 
S100A13               0.154   S100 calcium binding protein A13 
S100A13               0.154   S100 calcium binding protein A13 
S100A13               0.154   S100 calcium binding protein A13 
S100A13               0.154   S100 calcium binding protein A13 
S100A13               0.154   S100 calcium binding protein A13 
S100A16               0.149   S100 calcium binding protein A16 
SNTN                  0.143   sentan, cilia apical structure protein 
S100A8                0.137   S100 calcium-binding protein A8 
HRNR                  0.137   hornerin 
RPTN                  0.131   repetin 
S100G                 0.126   calbindin 3 
CRNN                  0.103   cornulin 
FLG                   0.097   filaggrin 
S100A14               0.091   S100 calcium binding protein A14 
TCHH                  0.086   trichohyalin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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