Guide to the Human Genome
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Name: S100Z Sequence: fasta or formatted (99aa) NCBI GI: 150010678
Description:

S100 calcium binding protein Z

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1          5           2
 C cysteine            2.0          2           1
 D aspartate           7.1          7           1
 E glutamate           9.1          9           1
 F phenylalanine       6.1          6           1
 G glycine             3.0          3           1
 H histidine           1.0          1           1
 I isoleucine          3.0          3           1
 K lysine             12.1         12           3
 L leucine            12.1         12           3
 M methionine          5.1          5           1
 N asparagine          4.0          4           1
 P proline             1.0          1           1
 Q glutamine           6.1          6           1
 R arginine            5.1          5           1
 S serine              3.0          3           1
 T threonine           5.1          5           1
 V valine              8.1          8           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   S100 calcium binding protein Z 
S100A1                0.506   S100 calcium binding protein A1 
S100P                 0.419   S100 calcium binding protein P 
S100A10               0.401   S100 calcium binding protein A10 
S100A4                0.395   S100 calcium-binding protein A4 
S100A4                0.395   S100 calcium-binding protein A4 
S100B                 0.366   S100 calcium-binding protein, beta 
S100A2                0.343   S100 calcium binding protein A2 
S100A5                0.308   S100 calcium binding protein A5 
S100A11               0.291   S100 calcium binding protein A11 
S100A6                0.267   S100 calcium-binding protein A6 
S100A12               0.262   S100 calcium-binding protein A12 
FLG2                  0.233   filaggrin family member 2 
S100A9                0.227   S100 calcium-binding protein A9 
S100A3                0.227   S100 calcium binding protein A3 
LOC731414             0.215   PREDICTED: similar to S100 calcium binding protein ...
LOC731414             0.215   PREDICTED: similar to S100 calcium binding protein ...
LOC100288534          0.215   PREDICTED: hypothetical protein XP_002343611 
S100A16               0.180   S100 calcium binding protein A16 
S100G                 0.180   calbindin 3 
FLG                   0.169   filaggrin 
HRNR                  0.163   hornerin 
CRNN                  0.145   cornulin 
RPTN                  0.145   repetin 
S100A8                0.140   S100 calcium-binding protein A8 
S100A13               0.128   S100 calcium binding protein A13 
S100A13               0.128   S100 calcium binding protein A13 
S100A13               0.128   S100 calcium binding protein A13 
S100A13               0.128   S100 calcium binding protein A13 
S100A13               0.128   S100 calcium binding protein A13 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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