Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 5454032

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5454032 S100 calcium binding protein A1 [Homo sapiens]
         (94 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5454032 S100 calcium binding protein A1 [Homo sapiens]             189   3e-49
gi|150010678 S100 calcium binding protein Z [Homo sapiens]            112   6e-26
gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]          110   2e-25
gi|5174663 S100 calcium binding protein P [Homo sapiens]              102   5e-23
gi|9845516 S100 calcium-binding protein A4 [Homo sapiens]              99   1e-21
gi|4506765 S100 calcium-binding protein A4 [Homo sapiens]              99   1e-21
gi|5174661 S100 calcium binding protein A2 [Homo sapiens]              97   2e-21
gi|4506761 S100 calcium binding protein A10 [Homo sapiens]             89   1e-18
gi|4506767 S100 calcium binding protein A5 [Homo sapiens]              84   3e-17
gi|5032057 S100 calcium binding protein A11 [Homo sapiens]             83   5e-17
gi|7657532 S100 calcium-binding protein A6 [Homo sapiens]              77   4e-15
gi|4506763 S100 calcium binding protein A3 [Homo sapiens]              69   6e-13
gi|62122917 filaggrin family member 2 [Homo sapiens]                   67   3e-12
gi|5032059 S100 calcium-binding protein A12 [Homo sapiens]             67   4e-12
gi|4506773 S100 calcium-binding protein A9 [Homo sapiens]              66   7e-12
gi|239756890 PREDICTED: similar to S100 calcium binding protein ...    64   3e-11
gi|239751386 PREDICTED: similar to S100 calcium binding protein ...    64   3e-11
gi|239745893 PREDICTED: hypothetical protein XP_002343611 [Homo ...    64   3e-11
gi|171916097 repetin [Homo sapiens]                                    64   3e-11
gi|4757898 calbindin 3 [Homo sapiens]                                  62   8e-11
gi|21614544 S100 calcium-binding protein A8 [Homo sapiens]             59   6e-10
gi|57864582 hornerin [Homo sapiens]                                    58   2e-09
gi|66737374 S100 calcium binding protein A13 [Homo sapiens]            58   2e-09
gi|66737372 S100 calcium binding protein A13 [Homo sapiens]            58   2e-09
gi|66737370 S100 calcium binding protein A13 [Homo sapiens]            58   2e-09
gi|66737368 S100 calcium binding protein A13 [Homo sapiens]            58   2e-09
gi|5174659 S100 calcium binding protein A13 [Homo sapiens]             58   2e-09
gi|17933772 S100 calcium binding protein A16 [Homo sapiens]            55   2e-08
gi|122937510 sentan, cilia apical structure protein [Homo sapiens]     54   2e-08
gi|60097902 filaggrin [Homo sapiens]                                   54   3e-08

>gi|5454032 S100 calcium binding protein A1 [Homo sapiens]
          Length = 94

 Score =  189 bits (481), Expect = 3e-49
 Identities = 94/94 (100%), Positives = 94/94 (100%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK
Sbjct: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS 94
          ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS
Sbjct: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS 94


>gi|150010678 S100 calcium binding protein Z [Homo sapiens]
          Length = 99

 Score =  112 bits (280), Expect = 6e-26
 Identities = 54/92 (58%), Positives = 72/92 (78%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M ++LE AM+T+I +FH +SGKE  ++KLSK ELK LLQ EL+ FL  QK+   VDK+++
Sbjct: 1  MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQ 60

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFFWE 92
          +LD N D EVDF E+VV+VAALTVACN++F E
Sbjct: 61 DLDANKDNEVDFNEFVVMVAALTVACNDYFVE 92


>gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]
          Length = 92

 Score =  110 bits (275), Expect = 2e-25
 Identities = 53/88 (60%), Positives = 67/88 (76%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          SELE AM  LI+VFH +SG+EGDK+KL K ELKEL+  ELS FL+  K+ + VDKVM+ L
Sbjct: 2  SELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61

Query: 63 DENGDGEVDFQEYVVLVAALTVACNNFF 90
          D +GDGE DFQE++  VA +T AC+ FF
Sbjct: 62 DNDGDGECDFQEFMAFVAMVTTACHEFF 89


>gi|5174663 S100 calcium binding protein P [Homo sapiens]
          Length = 95

 Score =  102 bits (255), Expect = 5e-23
 Identities = 49/88 (55%), Positives = 66/88 (75%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          +ELETAM  +I+VF  +SG EG    L+K ELK L++ EL GFL + KD DAVDK++K+L
Sbjct: 2  TELETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDL 61

Query: 63 DENGDGEVDFQEYVVLVAALTVACNNFF 90
          D NGD +VDF E++V VAA+T AC+ +F
Sbjct: 62 DANGDAQVDFSEFIVFVAAITSACHKYF 89


>gi|9845516 S100 calcium-binding protein A4 [Homo sapiens]
          Length = 101

 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 46/90 (51%), Positives = 60/90 (66%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M   LE A++ +++ FH +SGKEGDK+KL+K ELKELL  EL  FL  + D  A  K+M 
Sbjct: 1  MACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMS 60

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFF 90
           LD N D EVDFQEY V ++ + + CN FF
Sbjct: 61 NLDSNRDNEVDFQEYCVFLSCIAMMCNEFF 90


>gi|4506765 S100 calcium-binding protein A4 [Homo sapiens]
          Length = 101

 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 46/90 (51%), Positives = 60/90 (66%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M   LE A++ +++ FH +SGKEGDK+KL+K ELKELL  EL  FL  + D  A  K+M 
Sbjct: 1  MACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMS 60

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFF 90
           LD N D EVDFQEY V ++ + + CN FF
Sbjct: 61 NLDSNRDNEVDFQEYCVFLSCIAMMCNEFF 90


>gi|5174661 S100 calcium binding protein A2 [Homo sapiens]
          Length = 97

 Score = 97.4 bits (241), Expect = 2e-21
 Identities = 47/90 (52%), Positives = 62/90 (68%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M S LE A+  L+  FH +S +EGDK+KLSK E+KELL  EL  F+  + D + + K+M 
Sbjct: 1  MCSSLEQALAVLVTTFHKYSCQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMG 60

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFF 90
           LDEN D +VDFQEY V +A +TV CN+FF
Sbjct: 61 SLDENSDQQVDFQEYAVFLALITVMCNDFF 90


>gi|4506761 S100 calcium binding protein A10 [Homo sapiens]
          Length = 97

 Score = 88.6 bits (218), Expect = 1e-18
 Identities = 44/90 (48%), Positives = 65/90 (72%), Gaps = 3/90 (3%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M S++E AMET++  FH  +G   DK  L+K++L+ L++ E  GFL+ QKD  AVDK+MK
Sbjct: 1  MPSQMEHAMETMMFTFHKFAG---DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMK 57

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFF 90
          +LD+  DG+V FQ +  L+A LT+ACN++F
Sbjct: 58 DLDQCRDGKVGFQSFFSLIAGLTIACNDYF 87


>gi|4506767 S100 calcium binding protein A5 [Homo sapiens]
          Length = 110

 Score = 83.6 bits (205), Expect = 3e-17
 Identities = 43/94 (45%), Positives = 64/94 (68%), Gaps = 3/94 (3%)

Query: 1   MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
           M + LE A+ T++  FH +SG+EG K  LS+KELKEL++ EL   L   K+  ++D +MK
Sbjct: 19  METPLEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELC--LGEMKE-SSIDDLMK 75

Query: 61  ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS 94
            LD+N D E+DF+EY V +  L +A N+FF E++
Sbjct: 76  SLDKNSDQEIDFKEYSVFLTMLCMAYNDFFLEDN 109


>gi|5032057 S100 calcium binding protein A11 [Homo sapiens]
          Length = 105

 Score = 82.8 bits (203), Expect = 5e-17
 Identities = 38/88 (43%), Positives = 58/88 (65%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          +E E  +E+LI VF  ++GK+G  Y LSK E    + TEL+ F   QKD   +D++MK+L
Sbjct: 8  TETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKL 67

Query: 63 DENGDGEVDFQEYVVLVAALTVACNNFF 90
          D N DG++DF E++ L+  L +AC++ F
Sbjct: 68 DTNSDGQLDFSEFLNLIGGLAMACHDSF 95


>gi|7657532 S100 calcium-binding protein A6 [Homo sapiens]
          Length = 90

 Score = 76.6 bits (187), Expect = 4e-15
 Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M   L+ A+  L+ +FH +SG+EGDK+ LSKKELKEL+Q EL+  + ++     + ++M+
Sbjct: 1  MACPLDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELT--IGSKLQDAEIARLME 58

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACN 87
          +LD N D EV+FQEYV  + AL +  N
Sbjct: 59 DLDRNKDQEVNFQEYVTFLGALALIYN 85


>gi|4506763 S100 calcium binding protein A3 [Homo sapiens]
          Length = 101

 Score = 69.3 bits (168), Expect = 6e-13
 Identities = 38/90 (42%), Positives = 53/90 (58%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M   LE A+  ++  F  ++G+ GDKYKL + ELKELLQ EL+ +   +      +K M 
Sbjct: 1  MARPLEQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMS 60

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFF 90
           LD N D EVDF EYV  +A L + C+ +F
Sbjct: 61 VLDTNKDCEVDFVEYVRSLACLCLYCHEYF 90


>gi|62122917 filaggrin family member 2 [Homo sapiens]
          Length = 2391

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 34/85 (40%), Positives = 56/85 (65%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          ++L  ++ T+I+VF+ ++ ++G+   LSK ELKELL+ EL   L    D D VD +M  L
Sbjct: 2  TDLLRSVVTVIDVFYKYTKQDGECGTLSKGELKELLEKELHPVLKNPDDPDTVDVIMHML 61

Query: 63 DENGDGEVDFQEYVVLVAALTVACN 87
          D + D  +DF E+++++  LT+ACN
Sbjct: 62 DRDHDRRLDFTEFLLMIFKLTMACN 86


>gi|5032059 S100 calcium-binding protein A12 [Homo sapiens]
          Length = 92

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 33/78 (42%), Positives = 52/78 (66%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          ++LE  +E ++N+FH +S ++G    LSK ELK+LL  EL+  +   KD   +D++ + L
Sbjct: 2  TKLEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGL 61

Query: 63 DENGDGEVDFQEYVVLVA 80
          D N D +VDFQE++ LVA
Sbjct: 62 DANQDEQVDFQEFISLVA 79


>gi|4506773 S100 calcium-binding protein A9 [Homo sapiens]
          Length = 114

 Score = 65.9 bits (159), Expect = 7e-12
 Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQ-KDVDAVDKVMKE 61
          S+LE  +ET+IN FH +S K G    L++ E KEL++ +L  FL  + K+   ++ +M++
Sbjct: 6  SQLERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMED 65

Query: 62 LDENGDGEVDFQEYVVLVAALTVA 85
          LD N D ++ F+E+++L+A LT A
Sbjct: 66 LDTNADKQLSFEEFIMLMARLTWA 89


>gi|239756890 PREDICTED: similar to S100 calcium binding protein A10
           (annexin II ligand, calpactin I, light polypeptide
           (p11)) [Homo sapiens]
          Length = 370

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 3   SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
           S +E  MET++  FH  +G   DK  L K+ LK L+  E  GFL+ QKD  A D  MK++
Sbjct: 266 SPMEHTMETVLFTFHRFAG---DKGYLMKEGLKVLMGKEFLGFLENQKDPLAADITMKDM 322

Query: 63  DENGDGEVDFQEYVVLVAALTVACNNFF 90
           D+  D  ++FQ    L A LT   NN+F
Sbjct: 323 DQCQDSTLNFQNLFSLTAGLTTVDNNYF 350


>gi|239751386 PREDICTED: similar to S100 calcium binding protein A10
           (annexin II ligand, calpactin I, light polypeptide
           (p11)) [Homo sapiens]
          Length = 370

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 3   SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
           S +E  MET++  FH  +G   DK  L K+ LK L+  E  GFL+ QKD  A D  MK++
Sbjct: 266 SPMEHTMETVLFTFHRFAG---DKGYLMKEGLKVLMGKEFLGFLENQKDPLAADITMKDM 322

Query: 63  DENGDGEVDFQEYVVLVAALTVACNNFF 90
           D+  D  ++FQ    L A LT   NN+F
Sbjct: 323 DQCQDSTLNFQNLFSLTAGLTTVDNNYF 350


>gi|239745893 PREDICTED: hypothetical protein XP_002343611 [Homo
           sapiens]
          Length = 350

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 37/88 (42%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 3   SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
           S +E  MET++  FH  +G   DK  L K+ LK L+  E  GFL+ QKD  A D  MK++
Sbjct: 246 SPMEHTMETVLFTFHRFAG---DKGYLMKEGLKVLMGKEFLGFLENQKDPLAADITMKDM 302

Query: 63  DENGDGEVDFQEYVVLVAALTVACNNFF 90
           D+  D  ++FQ    L A LT   NN+F
Sbjct: 303 DQCQDSTLNFQNLFSLTAGLTTVDNNYF 330


>gi|171916097 repetin [Homo sapiens]
          Length = 784

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 31/84 (36%), Positives = 51/84 (60%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          ++L  ++ ++I+VFH ++   GD   L K+ELK+LL  E    L    D + V+ ++  L
Sbjct: 2  AQLLNSILSVIDVFHKYAKGNGDCALLCKEELKQLLLAEFGDILQRPNDPETVETILNLL 61

Query: 63 DENGDGEVDFQEYVVLVAALTVAC 86
          D++ DG +DF EY++LV  L  AC
Sbjct: 62 DQDRDGHIDFHEYLLLVFQLVQAC 85


>gi|4757898 calbindin 3 [Homo sapiens]
          Length = 79

 Score = 62.4 bits (150), Expect = 8e-11
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 10 ETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGE 69
          E L  +F  ++ KEGD  +LSK ELK L+Q E    L   K  + +D + +ELD+NGDGE
Sbjct: 8  EELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLL---KGPNTLDDLFQELDKNGDGE 64

Query: 70 VDFQEYVVLVAALT 83
          V F+E+ VLV  ++
Sbjct: 65 VSFEEFQVLVKKIS 78


>gi|21614544 S100 calcium-binding protein A8 [Homo sapiens]
          Length = 93

 Score = 59.3 bits (142), Expect = 6e-10
 Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 4/94 (4%)

Query: 1  MGSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMK 60
          M +ELE A+ ++I+V+H +S  +G+ + + + +LK+LL+TE   ++  +      D   K
Sbjct: 1  MLTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYIRKK----GADVWFK 56

Query: 61 ELDENGDGEVDFQEYVVLVAALTVACNNFFWENS 94
          ELD N DG V+FQE+++LV  + VA +    E S
Sbjct: 57 ELDINTDGAVNFQEFLILVIKMGVAAHKKSHEES 90


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 29/77 (37%), Positives = 48/77 (62%)

Query: 11 TLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEV 70
          T+I+VF+ ++ + G+   L+K ELKELL+ E    L    D D VD +++ LD + + +V
Sbjct: 10 TVIDVFYQYATQHGEYDTLNKAELKELLENEFHQILKNPNDPDTVDIILQSLDRDHNKKV 69

Query: 71 DFQEYVVLVAALTVACN 87
          DF EY++++  L  A N
Sbjct: 70 DFTEYLLMIFKLVQARN 86


>gi|66737374 S100 calcium binding protein A13 [Homo sapiens]
          Length = 98

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          +ELE ++ET++  F   + +EG K  LS  E KEL+  +L   L   KDV ++D+ MK L
Sbjct: 7  TELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL---KDVGSLDEKMKSL 63

Query: 63 DENGDGEVDFQEYVVLVAAL 82
          D N D E+ F EY  L+  L
Sbjct: 64 DVNQDSELKFNEYWRLIGEL 83


>gi|66737372 S100 calcium binding protein A13 [Homo sapiens]
          Length = 98

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          +ELE ++ET++  F   + +EG K  LS  E KEL+  +L   L   KDV ++D+ MK L
Sbjct: 7  TELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL---KDVGSLDEKMKSL 63

Query: 63 DENGDGEVDFQEYVVLVAAL 82
          D N D E+ F EY  L+  L
Sbjct: 64 DVNQDSELKFNEYWRLIGEL 83


>gi|66737370 S100 calcium binding protein A13 [Homo sapiens]
          Length = 98

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          +ELE ++ET++  F   + +EG K  LS  E KEL+  +L   L   KDV ++D+ MK L
Sbjct: 7  TELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL---KDVGSLDEKMKSL 63

Query: 63 DENGDGEVDFQEYVVLVAAL 82
          D N D E+ F EY  L+  L
Sbjct: 64 DVNQDSELKFNEYWRLIGEL 83


>gi|66737368 S100 calcium binding protein A13 [Homo sapiens]
          Length = 98

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          +ELE ++ET++  F   + +EG K  LS  E KEL+  +L   L   KDV ++D+ MK L
Sbjct: 7  TELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL---KDVGSLDEKMKSL 63

Query: 63 DENGDGEVDFQEYVVLVAAL 82
          D N D E+ F EY  L+  L
Sbjct: 64 DVNQDSELKFNEYWRLIGEL 83


>gi|5174659 S100 calcium binding protein A13 [Homo sapiens]
          Length = 98

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 3  SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
          +ELE ++ET++  F   + +EG K  LS  E KEL+  +L   L   KDV ++D+ MK L
Sbjct: 7  TELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLL---KDVGSLDEKMKSL 63

Query: 63 DENGDGEVDFQEYVVLVAAL 82
          D N D E+ F EY  L+  L
Sbjct: 64 DVNQDSELKFNEYWRLIGEL 83


>gi|17933772 S100 calcium binding protein A16 [Homo sapiens]
          Length = 103

 Score = 54.7 bits (130), Expect = 2e-08
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 3  SELETAMETLINVFHAHSGKEG-DKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKE 61
          +ELE A+  L+  F+ +  K    K K+SK   +E+LQ EL+  L    +  A DK+++ 
Sbjct: 6  TELEKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQN 65

Query: 62 LDENGDGEVDFQEYVVLVAALT 83
          LD N DG + F EY  L+  +T
Sbjct: 66 LDANHDGRISFDEYWTLIGGIT 87


>gi|122937510 sentan, cilia apical structure protein [Homo sapiens]
          Length = 147

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 3/82 (3%)

Query: 3   SELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKEL 62
           S+LE A+ T   +F   S  +G   KL K   K+LLQT+   F + Q+      +++ EL
Sbjct: 54  SDLEKAIATTALIFRNSSDSDG---KLEKAIAKDLLQTQFRNFAEGQETKPKYREILSEL 110

Query: 63  DENGDGEVDFQEYVVLVAALTV 84
           DE+ + ++DF+++++L+ ++TV
Sbjct: 111 DEHTENKLDFEDFMILLLSITV 132


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 53.9 bits (128), Expect = 3e-08
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query: 12 LINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVD 71
          +IN+F  +S K+ +   LSKKELKELL+ E    L    D D VD  M  LD + + ++D
Sbjct: 11 IINLFKQYSKKDKNTDTLSKKELKELLEKEFRQILKNPDDPDMVDVFMDHLDIDHNKKID 70

Query: 72 FQEYVVLVAALTVA 85
          F E++++V  L  A
Sbjct: 71 FTEFLLMVFKLAQA 84


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,111,331
Number of Sequences: 37866
Number of extensions: 109490
Number of successful extensions: 633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 464
Number of HSP's gapped (non-prelim): 174
length of query: 94
length of database: 18,247,518
effective HSP length: 65
effective length of query: 29
effective length of database: 15,786,228
effective search space: 457800612
effective search space used: 457800612
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press