SNTN 2643

Name: SNTN	Sequence: fasta or formatted (147aa)		NCBI GI: 122937510
Description: sentan, cilia apical structure protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 11 2 C cysteine 2.0 3 1 D aspartate 6.8 10 1 E glutamate 6.8 10 1 F phenylalanine 3.4 5 1 G glycine 3.4 5 2 H histidine 2.0 3 1 I isoleucine 6.8 10 1 K lysine 10.2 15 1 L leucine 11.6 17 3 M methionine 4.1 6 1 N asparagine 4.1 6 1 P proline 4.1 6 1 Q glutamine 4.1 6 1 R arginine 4.8 7 1 S serine 9.5 14 2 T threonine 6.1 9 2 V valine 2.0 3 1 W tryptophan 0.0 0 0 Y tyrosine 0.7 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sentan, cilia apical structure protein S100A1 0.109 S100 calcium binding protein A1 S100A2 0.094 S100 calcium binding protein A2 S100A4 0.075 S100 calcium-binding protein A4 S100A4 0.075 S100 calcium-binding protein A4 S100Z 0.068 S100 calcium binding protein Z S100B 0.064 S100 calcium-binding protein, beta S100P 0.049 S100 calcium binding protein P S100A7L2 0.049 S100 calcium binding protein A7-like 2 S100A9 0.045 S100 calcium-binding protein A9 FLG2 0.045 filaggrin family member 2 S100A7A 0.038 S100 calcium binding protein A7-like 1 S100A5 0.038 S100 calcium binding protein A5 S100A11 0.030 S100 calcium binding protein A11 S100A7 0.030 S100 calcium binding protein A7 HRNR 0.026 hornerin VAV3 0.026 vav 3 guanine nucleotide exchange factor isoform 1 ... SNX13 0.026 sorting nexin 13 S100G 0.026 calbindin 3 DCTN2 0.023 dynactin 2 S100A3 0.023 S100 calcium binding protein A3 FLG 0.019 filaggrin VAV1 0.019 vav 1 guanine nucleotide exchange factor DEK 0.019 DEK oncogene isoform 2 DEK 0.019 DEK oncogene isoform 1 TMEM57 0.015 transmembrane protein 57 C1orf116 0.015 specifically androgen-regulated protein isoform 2 [... C1orf116 0.015 specifically androgen-regulated protein isoform 1 [... DHX16 0.011 DEAH (Asp-Glu-Ala-His) box polypeptide 16 TNNC2 0.011 fast skeletal muscle troponin C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.