Guide to the Human Genome
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Name: NFKBIL2 Sequence: fasta or formatted (1378aa) NCBI GI: 187608777
Description:

NF-kappa-B inhibitor-like protein 2

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7        161           3
 C cysteine            2.8         38           2
 D aspartate           4.6         63           2
 E glutamate           8.1        111           4
 F phenylalanine       1.8         25           2
 G glycine             7.0         97           2
 H histidine           3.4         47           2
 I isoleucine          1.7         23           2
 K lysine              2.5         34           2
 L leucine            14.9        205           3
 M methionine          1.3         18           1
 N asparagine          1.8         25           1
 P proline             6.0         83           4
 Q glutamine           7.0         96           3
 R arginine            8.2        113           2
 S serine              7.6        105           6
 T threonine           3.9         54           2
 V valine              3.4         47           2
 W tryptophan          0.9         12           1
 Y tyrosine            1.5         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NF-kappa-B inhibitor-like protein 2 
ANKRD11               0.032   ankyrin repeat domain 11 
BARD1                 0.029   BRCA1 associated RING domain 1 
ANKRD12               0.029   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.029   ankyrin repeat domain 12 isoform 1 
ANKRD32               0.025   ankyrin repeat domain 32 
ANKRD31               0.024   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.024   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.024   PREDICTED: ankyrin repeat domain 31 
LOC441869             0.023   hypothetical protein LOC441869 
NLRC5                 0.022   nucleotide-binding oligomerization domains 27 [Homo...
TTC28                 0.021   tetratricopeptide repeat domain 28 
ANK2                  0.021   ankyrin 2 isoform 3 
ANK2                  0.021   ankyrin 2 isoform 2 
ANK2                  0.021   ankyrin 2 isoform 1 
ANK3                  0.020   ankyrin 3 isoform 1 
TNKS2                 0.019   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD2                0.019   ankyrin repeat domain 2 isoform b 
PPP1R12A              0.018   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.018   protein phosphatase 1, regulatory (inhibitor) subunit...
TNKS                  0.018   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK1                  0.018   ankyrin 1 isoform 9 
ANK1                  0.018   ankyrin 1 isoform 1 
ANK1                  0.018   ankyrin 1 isoform 3 
ANK1                  0.018   ankyrin 1 isoform 2 
ANK1                  0.018   ankyrin 1 isoform 4 
PSMD10                0.018   proteasome 26S non-ATPase subunit 10 isoform 1 
PSMD10                0.018   proteasome 26S non-ATPase subunit 10 isform 2 
PPP1R12B              0.018   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.018   protein phosphatase 1, regulatory (inhibitor) subunit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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