Guide to the Human Genome
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Name: SLC30A1 Sequence: fasta or formatted (507aa) NCBI GI: 52352803
Description:

solute carrier family 30 (zinc transporter), member 1

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         36           1
 C cysteine            3.6         18           2
 D aspartate           3.6         18           1
 E glutamate           6.9         35           2
 F phenylalanine       3.6         18           1
 G glycine             7.5         38           2
 H histidine           4.1         21           3
 I isoleucine          4.7         24           2
 K lysine              4.1         21           2
 L leucine            10.8         55           2
 M methionine          2.6         13           1
 N asparagine          4.7         24           2
 P proline             5.5         28           1
 Q glutamine           3.2         16           2
 R arginine            4.1         21           2
 S serine              6.7         34           2
 T threonine           4.9         25           2
 V valine             10.1         51           3
 W tryptophan          1.0          5           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 30 (zinc transporter), member ... 
SLC30A10              0.237   solute carrier family 30 (zinc transporter), member ...
SLC30A5               0.099   solute carrier family 30 (zinc transporter), member ...
SLC30A7               0.092   zinc transporter like 2 
SLC30A7               0.092   zinc transporter like 2 
LOC728528             0.074   PREDICTED: similar to hCG1985805 
LOC728528             0.074   PREDICTED: similar to hCG1985805 
LOC728528             0.074   PREDICTED: similar to hCG1985805 
SLC30A3               0.059   solute carrier family 30 (zinc transporter), member ...
SLC30A2               0.051   solute carrier family 30, member 2 isoform 1 
SLC30A4               0.047   solute carrier family 30 (zinc transporter), member ...
SLC30A2               0.044   solute carrier family 30, member 2 isoform 2 
SLC30A8               0.041   solute carrier family 30 member 8 
SLC30A6               0.018   solute carrier family 30 (zinc transporter), member ...
SLC39A7               0.011   solute carrier family 39, member 7 
SLC39A7               0.011   solute carrier family 39, member 7 
DYRK1A                0.010   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.010   dual-specificity tyrosine-(Y)-phosphorylation regula...
RB1CC1                0.009   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.009   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
FOXC2                 0.008   forkhead box C2 
MAFA                  0.007   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
CDGAP                 0.007   Cdc42 GTPase-activating protein 
MUC12                 0.006   PREDICTED: mucin 12 
KNG1                  0.006   kininogen 1 isoform 1 
COL19A1               0.006   alpha 1 type XIX collagen precursor 
AKAP8L                0.006   A kinase (PRKA) anchor protein 8-like 
COL1A1                0.006   alpha 1 type I collagen preproprotein 
MUC12                 0.006   PREDICTED: mucin 12 
SLC39A10              0.006   solute carrier family 39 (zinc transporter), member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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