Guide to the Human Genome
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Name: SLC30A3 Sequence: fasta or formatted (388aa) NCBI GI: 21361112
Description:

solute carrier family 30 (zinc transporter), member 3

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3         44           2
 C cysteine            2.1          8           1
 D aspartate           2.8         11           1
 E glutamate           6.2         24           2
 F phenylalanine       4.1         16           1
 G glycine             7.5         29           2
 H histidine           4.4         17           2
 I isoleucine          2.6         10           1
 K lysine              1.0          4           1
 L leucine            13.9         54           2
 M methionine          3.1         12           2
 N asparagine          0.8          3           1
 P proline             7.7         30           3
 Q glutamine           2.6         10           1
 R arginine            5.7         22           2
 S serine              8.2         32           2
 T threonine           5.9         23           2
 V valine              6.4         25           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 30 (zinc transporter), member ... 
SLC30A2               0.462   solute carrier family 30, member 2 isoform 1 
SLC30A8               0.365   solute carrier family 30 member 8 
SLC30A2               0.327   solute carrier family 30, member 2 isoform 2 
SLC30A4               0.281   solute carrier family 30 (zinc transporter), member ...
SLC30A10              0.084   solute carrier family 30 (zinc transporter), member ...
SLC30A1               0.078   solute carrier family 30 (zinc transporter), member ...
SLC30A5               0.075   solute carrier family 30 (zinc transporter), member ...
SLC30A7               0.066   zinc transporter like 2 
SLC30A7               0.066   zinc transporter like 2 
SLC30A6               0.055   solute carrier family 30 (zinc transporter), member ...
LOC728528             0.018   PREDICTED: similar to hCG1985805 
LOC728528             0.018   PREDICTED: similar to hCG1985805 
LOC728528             0.018   PREDICTED: similar to hCG1985805 
WEE1                  0.011   WEE1 tyrosine kinase isoform 1 
RGS14                 0.011   regulator of G-protein signalling 14 
SLC16A13              0.011   monocarboxylate transporter 13 
LOC100292351          0.009   PREDICTED: hypothetical protein 
LOC100294389          0.009   PREDICTED: hypothetical protein 
CECR1                 0.008   cat eye syndrome critical region protein 1 isoform a...
DOCK4                 0.007   dedicator of cytokinesis 4 
KIAA0748              0.007   hypothetical protein LOC9840 
KIAA0748              0.007   hypothetical protein LOC9840 
ZNF428                0.007   zinc finger protein 428 
WDR24                 0.007   WD repeat domain 24 
BRSK1                 0.005   BR serine/threonine kinase 1 
MBD6                  0.005   methyl-CpG binding domain protein 6 
TTN                   0.005   titin isoform N2-A 
SLC48A1               0.005   heme-responsive gene 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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