Guide to the Human Genome
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Name: AKAP8L Sequence: fasta or formatted (646aa) NCBI GI: 49472841
Description:

A kinase (PRKA) anchor protein 8-like

Referenced in:

Cyclic Nucleotides
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         42           2
 C cysteine            1.2          8           1
 D aspartate           7.1         46           2
 E glutamate           9.9         64           5
 F phenylalanine       2.9         19           1
 G glycine            11.8         76           4
 H histidine           1.5         10           1
 I isoleucine          2.3         15           2
 K lysine              6.2         40           4
 L leucine             5.1         33           2
 M methionine          3.9         25           2
 N asparagine          2.9         19           2
 P proline             5.3         34           7
 Q glutamine           5.3         34           1
 R arginine            6.3         41           2
 S serine              7.4         48           2
 T threonine           5.9         38           2
 V valine              3.1         20           1
 W tryptophan          0.9          6           1
 Y tyrosine            4.3         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A kinase (PRKA) anchor protein 8-like 
AKAP8                 0.209   A-kinase anchor protein 8 
ZNF326                0.112   zinc finger protein 326 isoform 1 
DIAPH3                0.021   diaphanous homolog 3 isoform b 
DIAPH3                0.021   diaphanous homolog 3 isoform a 
NSBP1                 0.019   nucleosomal binding protein 1 
EIF5B                 0.018   eukaryotic translation initiation factor 5B 
MINK1                 0.018   misshapen/NIK-related kinase isoform 4 
DIAPH2                0.018   diaphanous 2 isoform 12C 
DIAPH2                0.018   diaphanous 2 isoform 156 
MINK1                 0.018   misshapen/NIK-related kinase isoform 2 
MINK1                 0.018   misshapen/NIK-related kinase isoform 3 
MINK1                 0.018   misshapen/NIK-related kinase isoform 1 
MYT1L                 0.017   myelin transcription factor 1-like 
RPGR                  0.017   retinitis pigmentosa GTPase regulator isoform C [Hom...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.016   cell division cycle 2-like 2 isoform 4 
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
PELP1                 0.015   proline, glutamic acid and leucine rich protein 1 [...
CHD3                  0.015   chromodomain helicase DNA binding protein 3 isoform...
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
TAF15                 0.015   TBP-associated factor 15 isoform 2 
TAF15                 0.015   TBP-associated factor 15 isoform 1 
MLL4                  0.015   myeloid/lymphoid or mixed-lineage leukemia 4 
KIF21B                0.015   kinesin family member 21B 
CCDC96                0.015   coiled-coil domain containing 96 
RANBP9                0.015   RAN binding protein 9 
TRIM44                0.015   DIPB protein 
CYLC1                 0.015   cylicin, basic protein of sperm head cytoskeleton 1...
EVL                   0.015   Enah/Vasp-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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