Guide to the Human Genome
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Name: SLC30A7 Sequence: fasta or formatted (376aa) NCBI GI: 222080086
Description:

zinc transporter like 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [376aa] zinc transporter like 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         27           2
 C cysteine            1.6          6           1
 D aspartate           4.8         18           2
 E glutamate           2.9         11           1
 F phenylalanine       7.4         28           3
 G glycine             8.5         32           2
 H histidine           7.2         27           2
 I isoleucine          7.7         29           1
 K lysine              2.7         10           1
 L leucine            12.2         46           3
 M methionine          1.9          7           2
 N asparagine          2.9         11           1
 P proline             3.5         13           2
 Q glutamine           4.3         16           2
 R arginine            3.2         12           1
 S serine              8.8         33           1
 T threonine           2.9         11           2
 V valine              6.9         26           2
 W tryptophan          1.3          5           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc transporter like 2 
SLC30A7               1.000   zinc transporter like 2 
SLC30A5               0.374   solute carrier family 30 (zinc transporter), member ...
SLC30A10              0.141   solute carrier family 30 (zinc transporter), member ...
SLC30A1               0.125   solute carrier family 30 (zinc transporter), member ...
SLC30A4               0.110   solute carrier family 30 (zinc transporter), member ...
SLC30A6               0.095   solute carrier family 30 (zinc transporter), member ...
SLC30A2               0.069   solute carrier family 30, member 2 isoform 1 
SLC30A3               0.067   solute carrier family 30 (zinc transporter), member ...
SLC30A8               0.056   solute carrier family 30 member 8 
SLC30A2               0.055   solute carrier family 30, member 2 isoform 2 
SLC39A7               0.047   solute carrier family 39, member 7 
SLC39A7               0.047   solute carrier family 39, member 7 
LOC728528             0.035   PREDICTED: similar to hCG1985805 
LOC728528             0.035   PREDICTED: similar to hCG1985805 
LOC728528             0.035   PREDICTED: similar to hCG1985805 
KNG1                  0.031   kininogen 1 isoform 1 
MAFA                  0.020   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
HRG                   0.020   histidine-rich glycoprotein precursor 
LOC729792             0.019   PREDICTED: hypothetical protein 
LOC729792             0.019   PREDICTED: hypothetical protein 
LOC100294501          0.019   PREDICTED: hypothetical protein 
LOC100294249          0.019   PREDICTED: hypothetical protein XP_002344067 
LOC100294136          0.019   PREDICTED: hypothetical protein 
LOC100294091          0.019   PREDICTED: hypothetical protein 
LOC730401             0.019   PREDICTED: hypothetical protein 
SLC39A10              0.017   solute carrier family 39 (zinc transporter), member...
SLC39A10              0.017   solute carrier family 39 (zinc transporter), member ...
LOC729792             0.017   PREDICTED: hypothetical protein 
CREB5                 0.016   cAMP responsive element binding protein 5 isoform de...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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