Guide to the Human Genome
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Name: SLC30A10 Sequence: fasta or formatted (485aa) NCBI GI: 52351208
Description:

solute carrier family 30 (zinc transporter), member 10

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         42           2
 C cysteine            3.5         17           2
 D aspartate           4.7         23           2
 E glutamate           5.6         27           2
 F phenylalanine       3.7         18           2
 G glycine             7.8         38           2
 H histidine           2.3         11           2
 I isoleucine          5.8         28           3
 K lysine              4.1         20           2
 L leucine            12.0         58           4
 M methionine          2.1         10           2
 N asparagine          3.5         17           1
 P proline             4.5         22           2
 Q glutamine           3.3         16           2
 R arginine            5.4         26           2
 S serine              7.4         36           2
 T threonine           4.1         20           1
 V valine              8.7         42           4
 W tryptophan          0.6          3           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 30 (zinc transporter), member ... 
SLC30A1               0.253   solute carrier family 30 (zinc transporter), member ...
SLC30A7               0.111   zinc transporter like 2 
SLC30A7               0.111   zinc transporter like 2 
LOC728528             0.105   PREDICTED: similar to hCG1985805 
LOC728528             0.105   PREDICTED: similar to hCG1985805 
LOC728528             0.105   PREDICTED: similar to hCG1985805 
SLC30A5               0.071   solute carrier family 30 (zinc transporter), member ...
SLC30A8               0.068   solute carrier family 30 member 8 
SLC30A3               0.068   solute carrier family 30 (zinc transporter), member ...
SLC30A2               0.063   solute carrier family 30, member 2 isoform 2 
SLC30A2               0.063   solute carrier family 30, member 2 isoform 1 
SLC30A4               0.049   solute carrier family 30 (zinc transporter), member ...
SLC30A6               0.018   solute carrier family 30 (zinc transporter), member ...
MARCO                 0.011   macrophage receptor with collagenous structure 
LOC100131271          0.008   PREDICTED: hypothetical protein 
LOC100131271          0.008   PREDICTED: hypothetical protein 
LOC100289044          0.008   PREDICTED: hypothetical protein XP_002343344 
MAST1                 0.007   microtubule associated serine/threonine kinase 1 [Ho...
SLC16A6               0.007   solute carrier family 16, member 6 
SPOCD1                0.006   SPOC domain containing 1 
ADAMTSL5              0.006   ADAMTS-like 5 
LTBP1                 0.005   latent transforming growth factor beta binding prote...
LTBP1                 0.005   latent transforming growth factor beta binding prote...
RASIP1                0.005   Ras-interacting protein 1 
LOC100292773          0.005   PREDICTED: hypothetical protein 
LOC100290063          0.005   PREDICTED: hypothetical protein XP_002346992 
LOC100287283          0.005   PREDICTED: hypothetical protein XP_002342840 
LOC100287283          0.005   PREDICTED: hypothetical protein 
WNK2                  0.005   WNK lysine deficient protein kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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