Guide to the Human Genome
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Name: MAFA Sequence: fasta or formatted (353aa) NCBI GI: 71274111
Description:

v-maf musculoaponeurotic fibrosarcoma oncogene homolog A

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         41           5
 C cysteine            1.4          5           1
 D aspartate           2.8         10           2
 E glutamate           7.1         25           2
 F phenylalanine       3.4         12           2
 G glycine            16.1         57           5
 H histidine           9.1         32          10
 I isoleucine          1.1          4           1
 K lysine              4.5         16           2
 L leucine             7.6         27           1
 M methionine          1.7          6           1
 N asparagine          1.4          5           1
 P proline             7.6         27           2
 Q glutamine           3.7         13           2
 R arginine            5.4         19           2
 S serine              7.6         27           2
 T threonine           2.0          7           1
 V valine              3.4         12           1
 W tryptophan          0.3          1           1
 Y tyrosine            2.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   v-maf musculoaponeurotic fibrosarcoma oncogene homol... 
MAF                   0.407   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.407   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
MAFB                  0.389   transcription factor MAFB 
NRL                   0.241   neural retina leucine zipper 
MAFK                  0.115   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
MAFG                  0.114   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
MAFG                  0.114   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAFF                  0.100   transcription factor MAFF isoform a 
MAFF                  0.100   transcription factor MAFF isoform a 
MAFF                  0.100   transcription factor MAFF isoform a 
MAFF                  0.091   transcription factor MAFF isoform b 
POU4F2                0.069   Brn3b POU domain transcription factor 
FUSSEL18              0.061   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.061   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.061   PREDICTED: functional smad suppressing element 18 [...
POU3F2                0.053   POU domain, class 3, transcription factor 2 
POU3F1                0.051   POU domain, class 3, transcription factor 1 
PPP1R10               0.050   protein phosphatase 1, regulatory subunit 10 
POU3F3                0.047   POU class 3 homeobox 3 
OTX1                  0.044   orthodenticle homeobox 1 
DLGAP3                0.042   discs, large (Drosophila) homolog-associated protei...
GATA6                 0.040   GATA binding protein 6 
BHLHE22               0.037   basic helix-loop-helix domain containing, class B, 5...
ARID1B                0.037   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
FOXB2                 0.037   forkhead box B2 
ARID1B                0.037   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.037   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
POU4F1                0.037   POU domain, class 4, transcription factor 1 
JUNB                  0.037   jun B proto-oncogene 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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