APAF1 35153

Name: APAF1	Sequence: fasta or formatted (1237aa)		NCBI GI: 7108333
Description: apoptotic peptidase activating factor 1 isoform a		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death WD Repeat Proteins
Other entries for this name: alt prot [1248aa] apoptotic peptidase activating factor 1 isoform c alt prot [1205aa] apoptotic peptidase activating factor 1 isoform d alt prot [338aa] apoptotic peptidase activating factor 1 isoform e alt prot [1194aa] apoptotic peptidase activating factor 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 65 2 C cysteine 3.3 41 3 D aspartate 6.9 85 2 E glutamate 6.3 78 3 F phenylalanine 4.0 50 2 G glycine 5.0 62 2 H histidine 3.9 48 2 I isoleucine 5.3 65 2 K lysine 7.1 88 2 L leucine 11.2 139 3 M methionine 2.1 26 1 N asparagine 4.2 52 2 P proline 2.4 30 1 Q glutamine 4.7 58 3 R arginine 3.8 47 2 S serine 8.0 99 4 T threonine 5.0 62 2 V valine 7.0 86 2 W tryptophan 2.1 26 2 Y tyrosine 2.4 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apoptotic peptidase activating factor 1 isoform a [Ho... APAF1 0.996 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.923 apoptotic peptidase activating factor 1 isoform b [Ho... APAF1 0.919 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.231 apoptotic peptidase activating factor 1 isoform e [H... WDR5 0.039 WD repeat domain 5 WDR5 0.039 WD repeat domain 5 WDR69 0.038 WD repeat domain 69 WDR5B 0.037 WD repeat domain 5B PAFAH1B1 0.033 platelet-activating factor acetylhydrolase, isoform I... SPAG16 0.032 sperm associated antigen 16 isoform 1 TEP1 0.032 telomerase-associated protein 1 WDR38 0.031 WD repeat domain 38 TAF5L 0.031 PCAF associated factor 65 beta isoform a FBXW7 0.031 F-box and WD repeat domain containing 7 isoform 3 [H... FBXW7 0.031 F-box and WD repeat domain containing 7 isoform 1 [H... FBXW7 0.031 F-box and WD repeat domain containing 7 isoform 2 [H... SNRNP40 0.030 WD repeat domain 57 (U5 snRNP specific) WDR51A 0.030 WD repeat domain 51A isoform 2 WDR51A 0.030 WD repeat domain 51A isoform 1 STRAP 0.030 serine/threonine kinase receptor associated protein... WDR88 0.030 PQQ repeat and WD repeat domain containing WDR51B 0.030 WD repeat domain 51B WDR3 0.028 WD repeat-containing protein 3 GNB2L1 0.028 guanine nucleotide binding protein (G protein), beta ... NLE1 0.028 Notchless gene homolog isoform a WDR61 0.027 WD repeat domain 61 WDR51A 0.026 WD repeat domain 51A isoform 3 TAF5 0.026 TBP-associated factor 5 WSB1 0.026 WD repeat and SOCS box-containing 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.