Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5031561
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031561 transmembrane glycoprotein A33 precursor [Homo
sapiens]
(319 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens] 650 0.0
gi|4503173 coxsackie virus and adenovirus receptor precursor [Ho... 137 2e-32
gi|62865874 immunoglobulin superfamily, member 11 isoform a [Hom... 128 8e-30
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 124 1e-28
gi|62865876 immunoglobulin superfamily, member 11 isoform b [Hom... 123 2e-28
gi|21361429 V-set and immunoglobulin domain containing 2 [Homo s... 117 1e-26
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 114 1e-25
gi|148664205 endothelial cell adhesion molecule [Homo sapiens] 106 2e-23
gi|8393638 F11 receptor precursor [Homo sapiens] 97 2e-20
gi|61966777 V-set and immunoglobulin domain containing 8 [Homo s... 89 5e-18
gi|10864029 junctional adhesion molecule 2 precursor [Homo sapiens] 85 7e-17
gi|21361905 junctional adhesion molecule 3 precursor [Homo sapiens] 80 2e-15
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] 67 2e-11
gi|67188443 CD276 antigen isoform a [Homo sapiens] 65 1e-10
gi|13376852 CD276 antigen isoform b [Homo sapiens] 62 5e-10
gi|6005958 V-set and immunoglobulin domain containing 4 isoform ... 62 7e-10
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 58 1e-08
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 58 1e-08
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 58 1e-08
gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo ... 58 1e-08
gi|221316762 neurotrimin isoform 4 [Homo sapiens] 57 2e-08
gi|221316757 neurotrimin isoform 3 [Homo sapiens] 57 2e-08
gi|115298665 neurotrimin isoform 2 [Homo sapiens] 57 2e-08
gi|7705413 neurotrimin isoform 1 [Homo sapiens] 57 2e-08
gi|66346706 neuronal growth regulator 1 [Homo sapiens] 56 4e-08
gi|222136611 poliovirus receptor-related 4 [Homo sapiens] 56 5e-08
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42... 55 6e-08
gi|40254891 hypothetical protein FLJ20674 [Homo sapiens] 55 8e-08
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 54 1e-07
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 54 1e-07
>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
Length = 319
Score = 650 bits (1678), Expect = 0.0
Identities = 319/319 (100%), Positives = 319/319 (100%)
Query: 1 MVGKMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDK 60
MVGKMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDK
Sbjct: 1 MVGKMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDK 60
Query: 61 LLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVS 120
LLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVS
Sbjct: 61 LLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVS 120
Query: 121 LMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNI 180
LMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNI
Sbjct: 121 LMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNI 180
Query: 181 LNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVG 240
LNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVG
Sbjct: 181 LNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVG 240
Query: 241 IAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDD 300
IAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDD
Sbjct: 241 IAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDD 300
Query: 301 YRQEEQRSTGRESPDHLDQ 319
YRQEEQRSTGRESPDHLDQ
Sbjct: 301 YRQEEQRSTGRESPDHLDQ 319
>gi|4503173 coxsackie virus and adenovirus receptor precursor [Homo
sapiens]
Length = 365
Score = 137 bits (344), Expect = 2e-32
Identities = 95/319 (29%), Positives = 161/319 (50%), Gaps = 29/319 (9%)
Query: 12 LCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGL-IQWDKLLLT-----H 65
LC V ++S+ TP++++ ++G++ LPC + S + L I+W L++
Sbjct: 10 LCGVVDFARSLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEW---LISPADNQK 66
Query: 66 TERVVIWPFSNKNYIHGELY---KNRVSI-SNNAEQSDASITIDQLTMADNGTYECSVSL 121
++V+I +K I+ + Y K RV SN+ + DASI + L ++D GTY+C V
Sbjct: 67 VDQVIILYSGDK--IYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVK- 123
Query: 122 MSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNIL 181
G ++ L+VLV PS C ++G IG++ ++ C+ KEGS QY W++ +
Sbjct: 124 --KAPGVANKKIHLVVLVKPSGARCYVDGSEEIGSDFKIKCEPKEGSLPLQYEWQKLSD- 180
Query: 182 NQEQPLAQPA--SGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYV 239
+Q+ P + A + +S+KN S++ SG Y CT N G+ C + + V PS L
Sbjct: 181 SQKMPTSWLAEMTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPPSNKAGLIA 240
Query: 240 GIAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEED 299
G +G + AL +IG+II+CC + E+K + + + E+ P S R
Sbjct: 241 GAIIGTLLALALIGLIIFCC----RKKRREEKYEKEVHHDIREDVPPPKSRTSTAR---- 292
Query: 300 DYRQEEQRSTGRESPDHLD 318
Y S G SP +++
Sbjct: 293 SYIGSNHSSLGSMSPSNME 311
>gi|62865874 immunoglobulin superfamily, member 11 isoform a [Homo
sapiens]
Length = 430
Score = 128 bits (321), Expect = 8e-30
Identities = 88/285 (30%), Positives = 141/285 (49%), Gaps = 9/285 (3%)
Query: 8 VLWTLCAVRVTVDA-ISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHT 66
+LW C R V A + V ++ ++G+ LPCT+ TS + + W L++
Sbjct: 7 LLWWNCFSRTGVAASLEVSESPGSIQVARGQPAVLPCTFTTSAALINLNVIWMVTPLSNA 66
Query: 67 ---ERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMS 123
E+V+++ + + + RV + ++ SI I+ ++D GTY+C V+ +
Sbjct: 67 NQPEQVILYQ-GGQMFDGAPRFHGRVGFTGTMPATNVSIFINNTQLSDTGTYQCLVNNLP 125
Query: 124 DLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRY-NILN 182
D+ G L VLVPPS P C I+G IG+++ L C S+EG P P Y W++ N L
Sbjct: 126 DIGGRNIGVTGLTVLVPPSAPHCQIQGSQDIGSDVILLCSSEEGIPRPTYLWEKLDNTLK 185
Query: 183 QEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPS-MNVALYVGI 241
Q V+++NIS +SG Y C +SN GT C + + V SP N+ L G
Sbjct: 186 LPPTATQDQVQGTVTIRNISALSSGLYQCVASNAIGTSTCLLDLQVISPQPRNIGLIAG- 244
Query: 242 AVGVVAALIIIGI-IIYCCCCRGKDDNTEDKEDARPNREAYEEPP 285
A+G A +II I +I + N E++E+ PN ++ P
Sbjct: 245 AIGTGAVIIIFCIALILGAFFYWRSKNKEEEEEEIPNEIREDDLP 289
>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
sapiens]
Length = 387
Score = 124 bits (310), Expect = 1e-28
Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 34/340 (10%)
Query: 1 MVGKMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGL-IQWD 59
MV W V L + V + V P + + G +VTL C Y T+ +SRE L IQW
Sbjct: 1 MVFAFWKVFLILSCLAGQVSVVQVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWS 60
Query: 60 KLLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSV 119
E + I+ + +K+R++ SN + +ASITI + AD+G Y C V
Sbjct: 61 FFHKKEMEPISIYFSQGGQAVAIGQFKDRITGSN--DPGNASITISHMQPADSGIYICDV 118
Query: 120 SLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRY- 178
+ D G + + + VLV PSKP C ++G G+ I L+C S G+P+P Y W +
Sbjct: 119 NNPPDFLGQNQGILNVSVLVKPSKPLCSVQGRPETGHTISLSCLSALGTPSPVYYWHKLE 178
Query: 179 --NILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVA 236
+I+ ++ P +G V + N++ GYY CT+ N G C I + P V
Sbjct: 179 GRDIVPVKENF-NPTTGILV-IGNLTNFEQGYYQCTAINRLGNSSCEIDLTSSHP--EVG 234
Query: 237 LYVGIAVG-VVAALIIIGIIIYC---CCCRGKDDNTE--------------DKEDARPNR 278
+ VG +G +V A III ++ + + K+ N++ + +A P
Sbjct: 235 IIVGALIGSLVGAAIIISVVCFARNKAKAKAKERNSKTIAELEPMTKINPRGESEAMPRE 294
Query: 279 EAYE---EPPEQLRELSREREEEDDYRQEEQRSTGRESPD 315
+A + P + E + +E DY E + T +P+
Sbjct: 295 DATQLEVTLPSSIHETGPDTIQEPDY---EPKPTQEPAPE 331
>gi|62865876 immunoglobulin superfamily, member 11 isoform b [Homo
sapiens]
Length = 431
Score = 123 bits (309), Expect = 2e-28
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 8/271 (2%)
Query: 21 AISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHT---ERVVIWPFSNK 77
++ V ++ ++G+ LPCT+ TS + + W L++ E+V+++ +
Sbjct: 22 SLEVSESPGSIQVARGQPAVLPCTFTTSAALINLNVIWMVTPLSNANQPEQVILYQ-GGQ 80
Query: 78 NYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLV 137
+ + RV + ++ SI I+ ++D GTY+C V+ + D+ G L V
Sbjct: 81 MFDGAPRFHGRVGFTGTMPATNVSIFINNTQLSDTGTYQCLVNNLPDIGGRNIGVTGLTV 140
Query: 138 LVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRY-NILNQEQPLAQPASGQPV 196
LVPPS P C I+G IG+++ L C S+EG P P Y W++ N L Q V
Sbjct: 141 LVPPSAPHCQIQGSQDIGSDVILLCSSEEGIPRPTYLWEKLDNTLKLPPTATQDQVQGTV 200
Query: 197 SLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPS-MNVALYVGIAVGVVAALIIIGI- 254
+++NIS +SG Y C +SN GT C + + V SP N+ L G A+G A +II I
Sbjct: 201 TIRNISALSSGLYQCVASNAIGTSTCLLDLQVISPQPRNIGLIAG-AIGTGAVIIIFCIA 259
Query: 255 IIYCCCCRGKDDNTEDKEDARPNREAYEEPP 285
+I + N E++E+ PN ++ P
Sbjct: 260 LILGAFFYWRSKNKEEEEEEIPNEIREDDLP 290
>gi|21361429 V-set and immunoglobulin domain containing 2 [Homo
sapiens]
Length = 327
Score = 117 bits (294), Expect = 1e-26
Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 10/258 (3%)
Query: 21 AISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTH--TERVVIWPFSNKN 78
A+ V+ P + L GK+ L CTY TS L +W + +E I F+N +
Sbjct: 23 AVEVKVPTEPLSTPLGKTAELTCTYSTSVGDSFAL-EWSFVQPGKPISESHPILYFTNGH 81
Query: 79 YIHGELYKNRVSISNNAEQSD-ASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLV 137
RVS+ N A++ + + +D GTY C V+ D N + L V
Sbjct: 82 LYPTGSKSKRVSLLQNPPTVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTNGLGLINLTV 141
Query: 138 LVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQP---LAQPASGQ 194
LVPPS P C G+T +G + L C S EG+P P Y+W R P + SGQ
Sbjct: 142 LVPPSNPLCSQSGQTSVGGSTALRCSSSEGAPKPVYNWVRLGTFPTPSPGSMVQDEVSGQ 201
Query: 195 PVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAALIIIGI 254
+ L N+S +SG Y C ++N+ G+ C +T++V PS G +GV+ ++++ +
Sbjct: 202 LI-LTNLSLTSSGTYRCVATNQMGSASCELTLSVTEPSQ--GRVAGALIGVLLGVLLLSV 258
Query: 255 IIYCCCCRGKDDNTEDKE 272
+C K+ + KE
Sbjct: 259 AAFCLVRFQKERGKKPKE 276
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 114 bits (285), Expect = 1e-25
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 19/274 (6%)
Query: 26 TPQDVLRASQGKSVTLPCTYHTSTSSREGL-IQWDKLLLTHTE--RVVIWPFSNKNYIHG 82
T ++ R ++ K VTLPC + ++ L I+W LLT E + V+ +S+++ +
Sbjct: 19 THTEIKRVAEEK-VTLPCHHQLGLPEKDTLDIEW---LLTDNEGNQKVVITYSSRHVYNN 74
Query: 83 --ELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVP 140
E K RV+ ++N DAS+ I+ L +D G Y C V S V L VLV
Sbjct: 75 LTEEQKGRVAFASNFLAGDASLQIEPLKPSDEGRYTCKVKNSGRY---VWSHVILKVLVR 131
Query: 141 PSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS----GQP- 195
PSKP+C +EGE G+++ L C+S G+ Y W+R E P S P
Sbjct: 132 PSKPKCELEGELTEGSDLTLQCESSSGTEPIVYYWQRIREKEGEDERLPPKSRIDYNHPG 191
Query: 196 -VSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAALIIIGI 254
V L+N++ SG Y CT+ NE G + C + V V+ ++ + G G+VA ++I +
Sbjct: 192 RVLLQNLTMSYSGLYQCTAGNEAGKESCVVRVTVQY-VQSIGMVAGAVTGIVAGALLIFL 250
Query: 255 IIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQL 288
+++ R + E++E RE E P +L
Sbjct: 251 LVWLLIRRKDKERYEEEERPNEIREDAEAPKARL 284
>gi|148664205 endothelial cell adhesion molecule [Homo sapiens]
Length = 390
Score = 106 bits (265), Expect = 2e-23
Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 34/273 (12%)
Query: 22 ISVETPQDVLRASQGKSVTLPCTY--HTSTSSREGLIQWDKLLLTHTERVVIWPFSNK-- 77
+ + P + L+A +G V LP Y H SS + W+ V+W F K
Sbjct: 31 LQLHLPANRLQAVEGGEVVLPAWYTLHGEVSSSQ---PWEVPF-------VMWFFKQKEK 80
Query: 78 -----NYIHG-ELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKS 131
+YI+G K VS+ + + S+ ++ L D+G Y CSV++ D +G ++
Sbjct: 81 EDQVLSYINGVTTSKPGVSLVYSMPSRNLSLRLEGLQEKDSGPYSCSVNVQ-DKQGKSRG 139
Query: 132 R----VRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPL 187
+ L VLVPP+ P C ++G +G N+ L+CQS P QY W R L Q
Sbjct: 140 HSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSKPAVQYQWDRQ--LPSFQTF 197
Query: 188 AQPASG---QPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVG 244
PA +SL N+S+ +G Y+C + NE GT CN+T+ V S A+ G VG
Sbjct: 198 FAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLEV-STGPGAAVVAGAVVG 256
Query: 245 VVAALIIIGIIIYCCCCRGK---DDNTEDKEDA 274
+ L ++ ++ RGK + + KEDA
Sbjct: 257 TLVGLGLLAGLVLLYHRRGKALEEPANDIKEDA 289
>gi|8393638 F11 receptor precursor [Homo sapiens]
Length = 299
Score = 96.7 bits (239), Expect = 2e-20
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 46/291 (15%)
Query: 12 LCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVI 71
LC++ + +++V + + +R + V L C Y +S R V
Sbjct: 21 LCSL--ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPR-----------------VE 61
Query: 72 WPFSNKNYIHGELYKNRVSISNNAEQS--DASITIDQLTMADNGTYECSVSLMSDLEGNT 129
W F + Y N+++ S + IT +T D GTY C VS + GN+
Sbjct: 62 WKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVS---EEGGNS 118
Query: 130 --KSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQP- 186
+ +V+L+VLVPPSKP I IGN LTC ++GSP +Y+W + I+ P
Sbjct: 119 YGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPK 178
Query: 187 ----------LAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVA 236
+ P +G+ V +S +G Y C + N GT + V + + NV
Sbjct: 179 STRAFSNSSYVLNPTTGELV-FDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVERNVG 237
Query: 237 LYVGIAVGVVAALIIIGII---IYCCCCRGKDDNTEDKEDARPNREAYEEP 284
+ I V+ LI++GI+ I+ RG D T K+ + Y +P
Sbjct: 238 V---IVAAVLVTLILLGILVFGIWFAYSRGHFDRT--KKGTSSKKVIYSQP 283
>gi|61966777 V-set and immunoglobulin domain containing 8 [Homo
sapiens]
Length = 414
Score = 89.0 bits (219), Expect = 5e-18
Identities = 81/286 (28%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 12 LCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSR--EGL-IQWDKLLL--THT 66
L AVR+ D Q+VL ++G +V L C Y GL I+W ++ H
Sbjct: 19 LSAVRINGDG------QEVLYLAEGDNVRLGCPYVLDPEDYGPNGLDIEWMQVNSDPAHH 72
Query: 67 ERVVIWPFSNKNYIHGEL--YKNRVSIS-NNAEQSDASITIDQLTMADNGTYECSVSLMS 123
V + +K HG L + RV + ++ Q DASI + L ++D TYEC V +
Sbjct: 73 RENVFLSYQDKRINHGSLPHLQQRVRFAASDPSQYDASINLMNLQVSDTATYECRVKKTT 132
Query: 124 DLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYN---- 179
+V + V P+ P C EG GN++ L C + GS Y W + +
Sbjct: 133 ----MATRKVIVTVQARPAVPMCWTEGHMTYGNDVVLKCYASGGSQPLSYKWAKISGHHY 188
Query: 180 ----------------ILNQE---QPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQ 220
+ QE + Q + + LK+IS G Y CT +N G
Sbjct: 189 PYRAGSYTSQHSYHSELSYQESFHSSINQGLNNGDLVLKDISRADDGLYQCTVANNVGYS 248
Query: 221 FCNITVAVRSPSMNVALYVGIAVGVVAALIIIGIIIY---CCCCRG 263
C + V V S S + + +GI +G + AL + + I+ CCCC G
Sbjct: 249 VCVVEVKV-SDSRRIGVIIGIVLGSLLALGCLAVGIWGLVCCCCGG 293
>gi|10864029 junctional adhesion molecule 2 precursor [Homo sapiens]
Length = 298
Score = 85.1 bits (209), Expect = 7e-17
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 36/249 (14%)
Query: 23 SVETPQDVLRASQGKSVTLPC-TYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYIH 81
S Q V+ A + + L C T + SSR ++W KL R V + + + +
Sbjct: 30 SAPKDQQVVTAVEYQEAILACKTPKKTVSSR---LEWKKL-----GRSVSFVYYQQT-LQ 80
Query: 82 GELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKS-RVRLLVLVP 140
G+ +KNR AE D +I I +T +D G Y C VS S+ N + V L VLV
Sbjct: 81 GD-FKNR------AEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVA 133
Query: 141 PSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKN 200
P+ P C + + G ++L CQ KEG+P P+Y+W + I E P S N
Sbjct: 134 PAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYTMN 193
Query: 201 ISTDT----------SGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAALI 250
T T +G Y C + N G + C ++ +N++ G++AA++
Sbjct: 194 TKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCP-GKRMQVDDLNIS-------GIIAAVV 245
Query: 251 IIGIIIYCC 259
++ ++I C
Sbjct: 246 VVALVISVC 254
>gi|21361905 junctional adhesion molecule 3 precursor [Homo sapiens]
Length = 355
Score = 80.1 bits (196), Expect = 2e-15
Identities = 78/296 (26%), Positives = 122/296 (41%), Gaps = 29/296 (9%)
Query: 19 VDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKN 78
+ A+++++ + +SV L C T + + + I+W K+ T V F NK
Sbjct: 74 IGAVNLKSSNRTPVVQEFESVELSCII-TDSQTSDPRIEWKKIQDEQTTYVF---FDNK- 128
Query: 79 YIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVL 138
I G+L R I S+ I +T D+ Y C V +D + + + L V
Sbjct: 129 -IQGDL-AGRAEILGKT-----SLKIWNVTRRDSALYRCEVVARNDRKEIDEIVIELTVQ 181
Query: 139 VPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSL 198
V P P C + +G L CQ EG P P YSW R ++ A P
Sbjct: 182 VKPVTPVCRVPKAVPVGKMATLHCQESEGHPRPHYSWYRNDVPLPTDSRANPRFRNSSFH 241
Query: 199 KNIST----------DTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAA 248
N T D SG Y C +SN+ G+ C + +N+ +G + V+A
Sbjct: 242 LNSETGTLVFTAVHKDDSGQYYCIASNDAGSARCE-EQEMEVYDLNIGGIIGGVLVVLAV 300
Query: 249 LIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDDYRQE 304
L +I + I C RG N +K+D E+Y+ P + +EE D+R +
Sbjct: 301 LALITLGICCAYRRGYFIN--NKQDG----ESYKNPGKPDGVNYIRTDEEGDFRHK 350
>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
Length = 416
Score = 67.0 bits (162), Expect = 2e-11
Identities = 71/309 (22%), Positives = 136/309 (44%), Gaps = 35/309 (11%)
Query: 4 KMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLL 63
++ P ++ L ++ +++ +P ++ + GKS L Y +STSS +++W
Sbjct: 16 RLAPFVYLLLIQTDPLEGVNITSPVRLIHGTVGKSALLSVQY-SSTSSDRPVVKWQ---- 70
Query: 64 THTERVVIWPFSNKNYIHGEL---YKNRVSISNNAEQSDASITIDQLTMADNGTYECSVS 120
++ V S + G L Y++R+ + N S+ + L +AD GTYE +S
Sbjct: 71 LKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFENG-----SLLLSDLQLADEGTYEVEIS 125
Query: 121 LMSDLEGNTKSRVRLLVLVPPSKPECGIEGETI--IGNNIQLTCQSKEGSPTPQYSWKRY 178
+ D K+ + L V VP S+P+ + T+ + L C S E P Y+W +
Sbjct: 126 ITDDTFTGEKT-INLTVDVPISRPQVLVASTTVLELSEAFTLNC-SHENGTKPSYTWLKD 183
Query: 179 N--ILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSN--EEGTQF-CNITVAVRSPSM 233
+LN + L P + +++ + + Y C N +G ITV RS
Sbjct: 184 GKPLLNDSRMLLSP-DQKVLTITRVLMEDDDLYSCMVENPISQGRSLPVKITVYRRS--- 239
Query: 234 NVALYVGIAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLR---- 289
+LY+ ++ G + L+ ++ C C + K + + + E ++ ++L+
Sbjct: 240 --SLYIILSTGGIFLLV---TLVTVCACWKPSKRKQKKLEKQNSLEYMDQNDDRLKPEAD 294
Query: 290 ELSREREEE 298
L R E+E
Sbjct: 295 TLPRSGEQE 303
>gi|67188443 CD276 antigen isoform a [Homo sapiens]
Length = 534
Score = 64.7 bits (156), Expect = 1e-10
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 34/309 (11%)
Query: 11 TLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLL-LTHTERV 69
T+ R A+ V+ P+D + A G TL C++ S L Q + + LT T+++
Sbjct: 236 TITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSF--SPEPGFSLAQLNLIWQLTDTKQL 293
Query: 70 VIWPFSNKNYIHGELYKNRVSISNNA-EQSDASITIDQLTMADNGTYECSVSLMSDLEGN 128
V ++ G Y NR ++ + Q +AS+ + ++ +AD G++ C VS +
Sbjct: 294 VHSFTEGRD--QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVS----IRDF 347
Query: 129 TKSRVRLLVLVPPSKPECGIEGETII--GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQP 186
+ V L V P SKP +E + G+ + +TC S G P + W+ Q P
Sbjct: 348 GSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFWQD----GQGVP 403
Query: 187 L------AQPASGQPV----SLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNV- 235
L +Q A+ Q + S+ + +G Y C N Q + +V + M
Sbjct: 404 LTGNVTTSQMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMTFP 463
Query: 236 --ALY--VGIAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLREL 291
AL+ VG++V ++A L+ + + C + K E+ A E L+ L
Sbjct: 464 PEALWVTVGLSVCLIALLVALAFV---CWRKIKQSCEEENAGAEDQDGEGEGSKTALQPL 520
Query: 292 SREREEEDD 300
+EDD
Sbjct: 521 KHSDSKEDD 529
Score = 55.5 bits (132), Expect = 6e-08
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 27/235 (11%)
Query: 21 AISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYI 80
A+ V+ P+D + A G TL C++ S L Q + + + ++ F+ +
Sbjct: 28 ALEVQVPEDPVVALVGTDATLCCSF--SPEPGFSLAQLNLIWQLTDTKQLVHSFA-EGQD 84
Query: 81 HGELYKNRVSISNNA-EQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLV 139
G Y NR ++ + Q +AS+ + ++ +AD G++ C VS + + V L V
Sbjct: 85 QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVS----IRDFGSAAVSLQVAA 140
Query: 140 PPSKPECGIEGETII--GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPL------AQPA 191
P SKP +E + G+ + +TC S +G P + W+ Q PL +Q A
Sbjct: 141 PYSKPSMTLEPNKDLRPGDTVTITCSSYQGYPEAEVFWQD----GQGVPLTGNVTTSQMA 196
Query: 192 SGQPV----SLKNISTDTSGYYICTSSNEEGTQFCNITVAV---RSPSMNVALYV 239
+ Q + S+ + +G Y C N Q + +V + RSP+ V + V
Sbjct: 197 NEQGLFDVHSILRVVLGANGTYSCLVRNPVLQQDAHSSVTITPQRSPTGAVEVQV 251
>gi|13376852 CD276 antigen isoform b [Homo sapiens]
Length = 316
Score = 62.4 bits (150), Expect = 5e-10
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 32/298 (10%)
Query: 21 AISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYI 80
A+ V+ P+D + A G TL C++ S L Q + + + ++ F+ +
Sbjct: 28 ALEVQVPEDPVVALVGTDATLCCSF--SPEPGFSLAQLNLIWQLTDTKQLVHSFA-EGQD 84
Query: 81 HGELYKNRVSISNNA-EQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLV 139
G Y NR ++ + Q +AS+ + ++ +AD G++ C VS + + V L V
Sbjct: 85 QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVS----IRDFGSAAVSLQVAA 140
Query: 140 PPSKPECGIEGETII--GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPL------AQPA 191
P SKP +E + G+ + +TC S G P + W+ Q PL +Q A
Sbjct: 141 PYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFWQD----GQGVPLTGNVTTSQMA 196
Query: 192 SGQPV----SLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNV---ALY--VGIA 242
+ Q + S+ + +G Y C N Q + +V + M AL+ VG++
Sbjct: 197 NEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMTFPPEALWVTVGLS 256
Query: 243 VGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDD 300
V ++A L+ + + C + K E+ A E L+ L +EDD
Sbjct: 257 VCLIALLVALAFV---CWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLKHSDSKEDD 311
>gi|6005958 V-set and immunoglobulin domain containing 4 isoform 1
[Homo sapiens]
Length = 399
Score = 62.0 bits (149), Expect = 7e-10
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 8 VLWTLCAVRVTVDAIS---VETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLT 64
+L L +TVD +E P+ V +G V LPCTY + L++W L+
Sbjct: 4 LLGLLLLGHLTVDTYGRPILEVPESVTGPWKG-DVNLPCTYDPLQGYTQVLVKW--LVQR 60
Query: 65 HTERVVIW-PFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMS 123
++ V I+ S+ ++I Y+ R+ +S+ D S+ + L M D Y C V+ +
Sbjct: 61 GSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKV-PGDVSLQLSTLEMDDRSHYTCEVTWQT 119
Query: 124 DLEGN-------TKSRVRLLVLVPPSKPECGIEGETI-IGNNIQLTCQSKEGSPTPQYSW 175
+GN T+ RV+ L + P+ G T+ G I L CQ++ GSP Y W
Sbjct: 120 P-DGNQVVRDKITELRVQKLSVSKPTVTTGSGYGFTVPQGMRISLQCQAR-GSPPISYIW 177
Query: 176 KRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQ 220
+ NQE + A+ + K SG Y CT+ + G++
Sbjct: 178 YKQQTNNQEP--IKVATLSTLLFKPAVIADSGSYFCTAKGQVGSE 220
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 58.2 bits (139), Expect = 1e-08
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 91 ISNNAEQSDASITIDQLTMADN--GTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECG- 147
+S + S+ ++T+ L++ N G+YEC + + N V L VL P P
Sbjct: 187 VSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQ--NPASANRSDPVTLNVLYGPDGPTISP 244
Query: 148 IEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSG 207
+ G N+ L+C + P QYSW Q S Q + + NI+ + SG
Sbjct: 245 SKANYRPGENLNLSCHAASNPPA-QYSWFINGTFQQ--------STQELFIPNITVNNSG 295
Query: 208 YYICTSSNE----EGTQFCNITVAVRSPSMNVALYVGIAVGVVAALIII 252
Y+C + N T ITV+ +P ++ VGI +GV+A + +I
Sbjct: 296 SYMCQAHNSATGLNRTTVTMITVSGSAPVLSAVATVGITIGVLARVALI 344
>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
Length = 1215
Score = 57.8 bits (138), Expect = 1e-08
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 95 AEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETII 154
A+ +D S+ I + D G Y+C + S+ G T++ V LLV P
Sbjct: 448 AQLADLSLEISGIIPTDGGRYQC---VASNANGVTRASVWLLVREAPQVSIHTSSQHFSQ 504
Query: 155 GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSS 214
G ++++C S G PTP SW R + QE + + ++ ++ + +G Y C ++
Sbjct: 505 GVEVKVSC-SASGYPTPHISWSRESQALQEDSRIHVDAQGTLIIQGVAPEDAGNYSCQAT 563
Query: 215 NEEGTQFCNITVAVRSPSMNVAL--YVGIAVGVVAALI 250
NE GT +T+ P A+ V +AVG A L+
Sbjct: 564 NEVGTDQETVTLYYTDPPSVSAVNAVVLVAVGEEAVLV 601
Score = 43.9 bits (102), Expect = 2e-04
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 92 SNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGE 151
S ++ ++D S+ +D+ G Y C + ++ G+ V L+V VPP
Sbjct: 813 SRHSIRADGSLHLDRALQEHAGRYSC---VATNTAGSQHRDVELVVQVPPRIHPTATHHI 869
Query: 152 TIIGNNIQLTCQSKEGSPTPQYSW-KRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYI 210
T G L C + G P P +W K N L P + + + S +G Y+
Sbjct: 870 TNEGVPASLPCVAS-GVPAPTITWTKETNALTSRGPHYNVSKEGTLLIAQPSAQDAGAYV 928
Query: 211 CTSSNEEG 218
CT++N G
Sbjct: 929 CTATNTVG 936
Score = 37.0 bits (84), Expect = 0.023
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 16/131 (12%)
Query: 99 DASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETI----- 153
+ ++ I Q + D G Y C+ + + G + +RL V P G +
Sbjct: 911 EGTLLIAQPSAQDAGAYVCTAT---NTVGFSSQEMRLSVNTKPRIHMNGSRNANVPLQVT 967
Query: 154 --IGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQP---VSLKNISTDTSGY 208
G + L C++K GSP P +W + + P+ P + L + SG+
Sbjct: 968 AKAGEEVTLDCEAK-GSPPPLVTWTKDS--RPVPPITNRYGLLPSGSLRLAQVQVGDSGH 1024
Query: 209 YICTSSNEEGT 219
Y CT+SN G+
Sbjct: 1025 YECTASNPAGS 1035
Score = 35.4 bits (80), Expect = 0.068
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 96 EQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIG 155
E ++S I + + A+ GTYEC+ + G +++ +++V PP + G
Sbjct: 358 ESGNSSWEILRASKAEEGTYECTAVSRA---GTGRAKAQIVVTDPPPQLVPAPNVTVSPG 414
Query: 156 NNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS-GQPVSLKNISTDTSGY------ 208
L+C+ +P YN+ PAS G+ L ++S + SG
Sbjct: 415 ETAVLSCRVLGEAP--------YNLTWVRDWRVLPASTGRVAQLADLSLEISGIIPTDGG 466
Query: 209 -YICTSSNEEGTQFCNITVAVR-SPSMNV 235
Y C +SN G ++ + VR +P +++
Sbjct: 467 RYQCVASNANGVTRASVWLLVREAPQVSI 495
Score = 35.0 bits (79), Expect = 0.088
Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 18/148 (12%)
Query: 93 NNAEQSDASITI-DQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVL--VPPSKPECGIE 149
+ + Q D+ + + + D Y C ++ G ++ RL+V PP
Sbjct: 720 SRSRQPDSGVLFFESVAPEDQAPYVCEAR---NVFGKVQAEARLIVTGHAPPQIASSAPT 776
Query: 150 GETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVS------LKNIST 203
+ G + L C G P P+ W L +PL P S + L
Sbjct: 777 VRVLEGQPVSLPCIVLAGRPLPERHW-----LKDGRPLP-PGSRHSIRADGSLHLDRALQ 830
Query: 204 DTSGYYICTSSNEEGTQFCNITVAVRSP 231
+ +G Y C ++N G+Q ++ + V+ P
Sbjct: 831 EHAGRYSCVATNTAGSQHRDVELVVQVP 858
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 57.8 bits (138), Expect = 1e-08
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 95 AEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETII 154
A+ +D S+ I + D G Y+C + S+ G T++ V LLV P
Sbjct: 565 AQLADLSLEISGIIPTDGGRYQC---VASNANGVTRASVWLLVREAPQVSIHTSSQHFSQ 621
Query: 155 GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSS 214
G ++++C S G PTP SW R + QE + + ++ ++ + +G Y C ++
Sbjct: 622 GVEVKVSC-SASGYPTPHISWSRESQALQEDSRIHVDAQGTLIIQGVAPEDAGNYSCQAT 680
Query: 215 NEEGTQFCNITVAVRSPSMNVAL--YVGIAVGVVAALI 250
NE GT +T+ P A+ V +AVG A L+
Sbjct: 681 NEVGTDQETVTLYYTDPPSVSAVNAVVLVAVGEEAVLV 718
Score = 52.8 bits (125), Expect = 4e-07
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQL 160
S+ + Q+ + D+G YEC+ S + G+ R L V VPP + ++G + L
Sbjct: 1083 SLRLAQVQVGDSGHYECTAS---NPAGSASHRYVLGVQVPPQVQPGPRVLKVLVGEALDL 1139
Query: 161 TCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQ 220
C + EG+P PQ SW + ++ Q + V I T +G Y C +SN G
Sbjct: 1140 NCVA-EGNPEPQLSWSKDGVVLQGR-----GPQGSVHFAAIRTSDAGRYRCEASNSAGVD 1193
Query: 221 FCNITVAVRSP 231
+ + V P
Sbjct: 1194 AWEVELRVLEP 1204
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 90 SISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIE 149
S + E + + ++ A +G Y C + S G + + V VPP
Sbjct: 1640 SNESRLETDGSVLRLESPGEASSGLYSC---VASSPAGEAVLQYSVEVQVPPQLLVAEGL 1696
Query: 150 GE--TIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS-GQPVSLKNISTDTS 206
G+ TI+G ++L CQ+ GSP P W + +E Q AS G + + ++ D S
Sbjct: 1697 GQVTTIVGQPLELPCQAS-GSPVPTIQWLQNGRPAEELAGVQVASQGTTLHIDHVELDHS 1755
Query: 207 GYYICTSSNEEGTQFCNITVAV 228
G + C ++NE GT + V+V
Sbjct: 1756 GLFACQATNEAGTAGAEVEVSV 1777
Score = 48.5 bits (114), Expect = 8e-06
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 99 DASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGET--IIGN 156
+ S+ + ++ AD+G YEC + + G+T R +L+V VPPS E G + + G
Sbjct: 1260 EGSLFLASVSPADSGDYECQAT---NEVGSTSRRAKLVVYVPPSIREDGRKANVSGMAGQ 1316
Query: 157 NIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS---------------------GQP 195
++ L C + G P P+ W L Q + P GQ
Sbjct: 1317 SLTLECDAN-GFPVPEIVW-----LKDAQLVGVPLGWAGYGWDLGWGQVGGHRLLDEGQS 1370
Query: 196 VSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSP 231
+ I SG Y C + N+ GT + + V +P
Sbjct: 1371 LHFPRIQEGDSGLYSCRAENQAGTAQRDFHLLVLTP 1406
Score = 48.5 bits (114), Expect = 8e-06
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 102 ITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLT 161
+ I+++ + D G Y C+ + +L G +K V L VLVPP+ + + ++ L
Sbjct: 1850 LQIEKVDLRDEGIYTCAAT---NLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLE 1906
Query: 162 CQSKEGSPTPQYSW-KRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQ 220
C + G P P SW K + ++ + G+ + ++ +G Y C +SN G+
Sbjct: 1907 CLA-SGVPPPDVSWFKGHQPVSSWMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAGST 1965
Query: 221 FCNITVAVRSP 231
+ V P
Sbjct: 1966 ELRYGLRVNVP 1976
Score = 46.2 bits (108), Expect = 4e-05
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 8/135 (5%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETI--IGNNI 158
S+ ++ D+G Y C + G + LLVL PPS G E + G ++
Sbjct: 1370 SLHFPRIQEGDSGLYSCRAENQA---GTAQRDFHLLVLTPPSVLGAGAAQEVLGLAGADV 1426
Query: 159 QLTCQSKEGSPTPQYSWK--RYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNE 216
+L C + G PTPQ W R +L L GQ + + G Y C + +
Sbjct: 1427 ELQCWTS-GVPTPQVEWTKDRQPVLPGGPHLQVQEDGQVLRITGSHVGDEGRYQCVAFSP 1485
Query: 217 EGTQFCNITVAVRSP 231
G Q + + V +P
Sbjct: 1486 AGQQARDFQLRVHAP 1500
Score = 45.1 bits (105), Expect = 9e-05
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 19/144 (13%)
Query: 107 LTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETII----GNNIQLTC 162
L + D G Y C L G + R+ V PP+ G G + + L C
Sbjct: 3549 LRVRDAGLYTC---LAESPAGAIEKSFRVRVQAPPNI--VGPRGPRFVVGLAPGQLVLEC 3603
Query: 163 QSKEGSPTPQYSWKRYNILNQEQPLAQ-PASGQPVSLKNISTDTSGYYICTSSNEEGTQF 221
S E P P+ +W R I+ QE Q P G+ + L+ +ST SG Y CT+ N G+
Sbjct: 3604 -SVEAEPAPKITWHRDGIVLQEDAHTQFPERGRFLQLQALSTADSGDYSCTARNAAGSTS 3662
Query: 222 CNITVAVRS--------PSMNVAL 237
V + + P++NV++
Sbjct: 3663 VAFRVEIHTVPTIRSGPPAVNVSV 3686
Score = 43.9 bits (102), Expect = 2e-04
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 92 SNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGE 151
S ++ ++D S+ +D+ G Y C + ++ G+ V L+V VPP
Sbjct: 930 SRHSIRADGSLHLDRALQEHAGRYSC---VATNTAGSQHRDVELVVQVPPRIHPTATHHI 986
Query: 152 TIIGNNIQLTCQSKEGSPTPQYSW-KRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYI 210
T G L C + G P P +W K N L P + + + S +G Y+
Sbjct: 987 TNEGVPASLPCVAS-GVPAPTITWTKETNALTSRGPHYNVSKEGTLLIAQPSAQDAGAYV 1045
Query: 211 CTSSNEEG 218
CT++N G
Sbjct: 1046 CTATNTVG 1053
Score = 42.7 bits (99), Expect = 4e-04
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 110 ADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEG---ETIIGNNIQLTCQSKE 166
+D G Y C S + G + RL V VPP+ G + + G + L C ++
Sbjct: 1566 SDAGVYTCKAS---NAVGAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVALECVAR- 1621
Query: 167 GSPTPQYSWKRYNILNQEQPLAQ-PASGQPVSLKNISTDTSGYYICTSSNEEGTQFCNIT 225
G P+P SW + E ++ G + L++ +SG Y C +S+ G +
Sbjct: 1622 GHPSPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGLYSCVASSPAGEAVLQYS 1681
Query: 226 VAVRSPSMNVALYVGIAVGVVAALI 250
V V+ P L V +G V ++
Sbjct: 1682 VEVQVPPQ---LLVAEGLGQVTTIV 1703
Score = 42.4 bits (98), Expect = 6e-04
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 111 DNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPT 170
D G Y C + + G+ + RL+V VPP + T G++ L C+++ GSP
Sbjct: 4011 DAGNYLC---IAKNSAGSAMGKTRLVVQVPPVIENGLPDLSTTEGSHAFLPCKAR-GSPE 4066
Query: 171 PQYSWKRYN--ILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEG 218
P +W + + E SG+ + +KN+ +G Y CT+ N G
Sbjct: 4067 PNITWDKDGQPVSGAEGKFTIQPSGE-LLVKNLEGQDAGTYTCTAENAVG 4115
Score = 42.0 bits (97), Expect = 7e-04
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Query: 99 DASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETII---G 155
+ S+TI + D G Y+C +++ E +V +LVL S P +E + + G
Sbjct: 4270 NGSLTIHRTERDDAGRYQC----LAENEMGVAKKVVILVL--QSAPVFQVEPQDMTVRSG 4323
Query: 156 NNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVS-----LKNISTDTSGYYI 210
+++ L CQ+ G PTP W L QPL + + L+N+ T +G Y
Sbjct: 4324 DDVALRCQAT-GEPTPTIEW-----LQAGQPLRASRRLRTLPDGSLWLENVETGDAGTYD 4377
Query: 211 CTSSNEEGTQFCNITVAVR 229
C + N G+ + VR
Sbjct: 4378 CVAHNLLGSATARAFLVVR 4396
Score = 41.6 bits (96), Expect = 0.001
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 44/230 (19%)
Query: 12 LCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQW--DKLLLTHTERV 69
L +RV V + + A SV+LPC H + + W D L+ E V
Sbjct: 2928 LFTLRVQVPPRIAGLDLEQVTAILNSSVSLPCDVHAHPNPE---VTWYKDSQALSLGEEV 2984
Query: 70 VIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNT 129
+ P ++ ++ + + ++D+G Y C + G
Sbjct: 2985 FLLPGTH------------------------TLQLGRARLSDSGMYTCEAL---NAAGRD 3017
Query: 130 KSRVRLLVLVPPSKPEC--GIEGETII--GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQ 185
+ V+L VLVPP+ + G + ++ G+ L+C++ + P P +W + Q
Sbjct: 3018 QKLVQLSVLVPPAFRQAPRGPQDAVLVRVGDKAVLSCET-DALPEPTVTWYKDG---QPL 3073
Query: 186 PLAQPAS----GQPVSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSP 231
LAQ GQ + ++ G Y C SN G T+ V+ P
Sbjct: 3074 VLAQRTQALRGGQRLEIQEAQVSDKGLYSCKVSNVAGEAVRTFTLTVQVP 3123
Score = 41.2 bits (95), Expect = 0.001
Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPS-----KPECGIEGETIIG 155
S+ +++ A G Y C + +L G + + L VLVPP P I +
Sbjct: 2313 SLHVERAQAAHTGRYSC---VAENLAGRAERKFELSVLVPPELIGDLDPLTNITAA--LH 2367
Query: 156 NNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQP------ASGQPVSLKNISTDTSGYY 209
+ + L C++ G P P W R E+P++ A G + + SG Y
Sbjct: 2368 SPLTLLCEAM-GIPPPAIRWFR-----GEEPVSPGEDTYLLAGGWMLKMTQTQEQDSGLY 2421
Query: 210 ICTSSNEEGTQFCNITVAVRSP 231
C +SNE G N +V V P
Sbjct: 2422 SCLASNEAGEARRNFSVEVLVP 2443
Score = 40.8 bits (94), Expect = 0.002
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 102 ITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLT 161
+ + L+ AD+G Y C+ + G+T R+ + P+ + L
Sbjct: 3637 LQLQALSTADSGDYSCTAR---NAAGSTSVAFRVEIHTVPTIRSGPPAVNVSVNQTALLP 3693
Query: 162 CQSKEGSPTPQYSWKRYNI-LNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGT 219
CQ+ +G P P SW++ + L+ P + + ++ + +G+Y+C +SN G+
Sbjct: 3694 CQA-DGVPAPLVSWRKDRVPLDPRSPRFEILPEGSLRIQPVLAQDAGHYLCLASNSAGS 3751
Score = 38.1 bits (87), Expect = 0.010
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 109 MADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNN--IQLTCQSKE 166
+ D G Y+C + G +L V PP+ GE + + +QL C+++
Sbjct: 1472 VGDEGRYQC---VAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLVQLLCEAR- 1527
Query: 167 GSPTPQYSW-KRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEG 218
G PTP +W K +L + G+ + L + +G Y C +SN G
Sbjct: 1528 GVPTPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAGVYTCKASNAVG 1580
Score = 37.4 bits (85), Expect = 0.018
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 107 LTMADN-GTYECSVSLMSDLEGNTKSRVRLLVLVPP---SKPECGIEGETI-IGNNIQLT 161
L A+N G Y C S + G LLVL PP E +E T+ + + L
Sbjct: 2810 LVRAENAGRYSCKAS---NEVGEDWLHYELLVLTPPVILGDTEELVEEVTVNASSTVSLQ 2866
Query: 162 CQSKEGSPTPQYSWKRYNILNQEQPLAQPAS-GQPVSLKNISTDTSGYYICTSSNEEGTQ 220
C + G+P P SW + + P Q GQ + + + Y+C + N+ G+
Sbjct: 2867 CPAL-GNPVPTISWLQNGLPFSPSPRLQVLEDGQVLQVSTAEVADAASYMCVAENQAGSA 2925
Query: 221 FCNITVAVRSPSMNVALYVGIAVGVVAALIIIGIIIYC 258
T+ V+ P G+ + V A++ + + C
Sbjct: 2926 EKLFTLRVQVPPR----IAGLDLEQVTAILNSSVSLPC 2959
Score = 36.6 bits (83), Expect = 0.030
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 111 DNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKP------ECGI-EGETIIGNNIQLTCQ 163
D G Y C V+ ++L G + VL+PPS E G+ E +T + + + L C+
Sbjct: 2606 DAGQYTCVVT--NEL-GEAVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNSTLTLECE 2662
Query: 164 SKEGSPTPQYSW-KRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQFC 222
S P P W K + L G+ + ++ SG Y+C ++N G
Sbjct: 2663 SW-AVPPPTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQ 2721
Query: 223 NITVAVRSPSM 233
+ V ++ P M
Sbjct: 2722 DFNVLIQVPPM 2732
Score = 36.6 bits (83), Expect = 0.030
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETII---GNN 157
S+ + L +D G Y C + + G + VLVPP+ + T++ G
Sbjct: 3274 SLVLKGLRASDAGAYTC---VAHNPAGEDARLHTVNVLVPPTIKQGADGSGTLVSRPGEL 3330
Query: 158 IQLTCQSKEGSPTPQYSWKRYNI-LNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNE 216
+ + C + GSP SW + + L Q SG + + + +G + C +++
Sbjct: 3331 VTMVCPVR-GSPPIHVSWLKDGLPLPLSQRTLLHGSGHTLRISKVQLADAGIFTCVAASP 3389
Query: 217 EGTQFCNITVAVRSP 231
G N T+ V+ P
Sbjct: 3390 AGVADRNFTLQVQVP 3404
Score = 35.8 bits (81), Expect = 0.052
Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 33/155 (21%)
Query: 102 ITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECG-------------- 147
+ I ++D+G Y C + +++ G +L+ VPP + G
Sbjct: 2695 LQIQPTQVSDSGRYLC---VATNVAGEDDQDFNVLIQVPPMFQKVGDFSAAFEILSREEE 2751
Query: 148 -----IEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQP------ASGQPV 196
E I+ NN P P +W R ++QPL+ G+ +
Sbjct: 2752 ARGGVTEYREIVENNPAYLYCDTNAIPPPDLTWYR-----EDQPLSAGDEVSVLQGGRVL 2806
Query: 197 SLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSP 231
+ + + +G Y C +SNE G + + + V +P
Sbjct: 2807 QIPLVRAENAGRYSCKASNEVGEDWLHYELLVLTP 2841
Score = 35.4 bits (80), Expect = 0.068
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 96 EQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIG 155
E ++S I + + A+ GTYEC+ + G +++ +++V PP + G
Sbjct: 475 ESGNSSWEILRASKAEEGTYECTAVSRA---GTGRAKAQIVVTDPPPQLVPAPNVTVSPG 531
Query: 156 NNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS-GQPVSLKNISTDTSGY------ 208
L+C+ +P YN+ PAS G+ L ++S + SG
Sbjct: 532 ETAVLSCRVLGEAP--------YNLTWVRDWRVLPASTGRVAQLADLSLEISGIIPTDGG 583
Query: 209 -YICTSSNEEGTQFCNITVAVR-SPSMNV 235
Y C +SN G ++ + VR +P +++
Sbjct: 584 RYQCVASNANGVTRASVWLLVREAPQVSI 612
Score = 35.4 bits (80), Expect = 0.068
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 17/136 (12%)
Query: 91 ISNNAEQSDASITIDQLTMA--DNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGI 148
++ + D T+ + ++ D+GTY C N R + + V + +
Sbjct: 4169 VTEGVSEQDGGSTLQRAAVSREDSGTYVCWAE-------NRVGRTQAVSFVHVKEAPV-L 4220
Query: 149 EGETI------IGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNIS 202
+GE +G +IQL C + G P P W + + + L +++
Sbjct: 4221 QGEAFSYLVEPVGGSIQLDCVVR-GDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIHRTE 4279
Query: 203 TDTSGYYICTSSNEEG 218
D +G Y C + NE G
Sbjct: 4280 RDDAGRYQCLAENEMG 4295
Score = 35.0 bits (79), Expect = 0.088
Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 18/148 (12%)
Query: 93 NNAEQSDASITI-DQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVL--VPPSKPECGIE 149
+ + Q D+ + + + D Y C ++ G ++ RL+V PP
Sbjct: 837 SRSRQPDSGVLFFESVAPEDQAPYVCEAR---NVFGKVQAEARLIVTGHAPPQIASSAPT 893
Query: 150 GETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVS------LKNIST 203
+ G + L C G P P+ W L +PL P S + L
Sbjct: 894 VRVLEGQPVSLPCIVLAGRPLPERHW-----LKDGRPLP-PGSRHSIRADGSLHLDRALQ 947
Query: 204 DTSGYYICTSSNEEGTQFCNITVAVRSP 231
+ +G Y C ++N G+Q ++ + V+ P
Sbjct: 948 EHAGRYSCVATNTAGSQHRDVELVVQVP 975
Score = 34.3 bits (77), Expect = 0.15
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 102 ITIDQLTMADNGTYEC-SVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQL 160
+T+ +D+G Y C +VS + G + V L V +PPS + + ++ L
Sbjct: 2035 LTLASARASDSGRYSCVAVSAV----GEDRQDVVLQVHMPPSILGEELNVSVVANESVAL 2090
Query: 161 TCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEG 218
CQS P WK L + A + + +G+Y C + N+ G
Sbjct: 2091 ECQSHAMPPPVLSWWKDGRPLEPRPGVHLSADKALLQVDRADVWDAGHYTCEALNQAG 2148
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 4/131 (3%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQL 160
++ I Q G Y CS + G V L V P + + L
Sbjct: 3911 ALEIGQALPIHAGRYTCSAR---NSAGVAHKHVFLTVQASPVVKPLPSVVRAVAEEEVLL 3967
Query: 161 TCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQ 220
C++ G P P +W++ + Q G + + + S + +G Y+C + N G+
Sbjct: 3968 PCEAS-GIPRPTITWQKEGLNVATGVSTQVLPGGQLRIAHASPEDAGNYLCIAKNSAGSA 4026
Query: 221 FCNITVAVRSP 231
+ V+ P
Sbjct: 4027 MGKTRLVVQVP 4037
Score = 33.1 bits (74), Expect = 0.34
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 10/132 (7%)
Query: 106 QLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPS-----KPECGIEGETIIGNNIQL 160
Q ++ G Y C + ++ G +L VL+ P+ + E + N I L
Sbjct: 2505 QANLSSAGHYSC---IAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPISL 2561
Query: 161 TCQSKEGSPTPQYSWKRYNILNQEQPLAQPASG-QPVSLKNISTDTSGYYICTSSNEEGT 219
C++ P+P +W + + Q G + + N + +G Y C +NE G
Sbjct: 2562 ICEAL-AFPSPNITWMKDGAPFEASRNIQLLPGTHGLQILNAQKEDAGQYTCVVTNELGE 2620
Query: 220 QFCNITVAVRSP 231
N V V P
Sbjct: 2621 AVKNYHVEVLIP 2632
>gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo
sapiens]
Length = 790
Score = 57.8 bits (138), Expect = 1e-08
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 95 AEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETII 154
A+ +D S+ I + D G Y+C + S+ G T++ V LLV P
Sbjct: 564 AQLADLSLEISGIIPTDGGRYQC---VASNANGVTRASVWLLVREAPQVSIHTSSQHFSQ 620
Query: 155 GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSS 214
G ++++C S G PTP SW R + QE + + ++ ++ + +G Y C ++
Sbjct: 621 GVEVKVSC-SASGYPTPHISWSRESQALQEDSRIHVDAQGTLIIQGVAPEDAGNYSCQAT 679
Query: 215 NEEGTQFCNITVAVRSPSMNVAL--YVGIAVGVVAALI 250
NE GT +T+ P A+ V +AVG A L+
Sbjct: 680 NEVGTDQETVTLYYTDPPSVSAVNAVVLVAVGEEAVLV 717
Score = 35.4 bits (80), Expect = 0.068
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 96 EQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIG 155
E ++S I + + A+ GTYEC+ + G +++ +++V PP + G
Sbjct: 474 ESGNSSWEILRASKAEEGTYECTAVSRA---GTGRAKAQIVVTDPPPQLVPAPNVTVSPG 530
Query: 156 NNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS-GQPVSLKNISTDTSGY------ 208
L+C+ +P YN+ PAS G+ L ++S + SG
Sbjct: 531 ETAVLSCRVLGEAP--------YNLTWVRDWRVLPASTGRVAQLADLSLEISGIIPTDGG 582
Query: 209 -YICTSSNEEGTQFCNITVAVR-SPSMNV 235
Y C +SN G ++ + VR +P +++
Sbjct: 583 RYQCVASNANGVTRASVWLLVREAPQVSI 611
>gi|221316762 neurotrimin isoform 4 [Homo sapiens]
Length = 316
Score = 57.4 bits (137), Expect = 2e-08
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 29 DVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYIHGELYKNR 88
D + QG+S TL CT + R + +L ++ + P R
Sbjct: 43 DNVTVRQGESATLRCTIDNRVT-RVAWLNRSTILYAGNDKWCLDP--------------R 87
Query: 89 VSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGI 148
V + +N Q+ SI I + + D G Y CSV +D T SRV L+V V P E
Sbjct: 88 VVLLSNT-QTQYSIEIQNVDVYDEGPYTCSVQ--TDNHPKT-SRVHLIVQVSPKIVEISS 143
Query: 149 EGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGY 208
+ GNNI LTC + G P P +W+ + + + + + + ++ I+ + SG
Sbjct: 144 DISINEGNNISLTCIA-TGRPEPTVTWRHIS----PKAVGFVSEDEYLEIQGITREQSGD 198
Query: 209 YICTSSNEEGTQFC-NITVAVR-SPSMNVALYVGIAVG 244
Y C++SN+ + V V P ++ A G+ VG
Sbjct: 199 YECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVG 236
Score = 39.3 bits (90), Expect = 0.005
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 99 DASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNI 158
D + I +T +G YECS S +D+ RV++ V PP E G + G
Sbjct: 183 DEYLEIQGITREQSGDYECSAS--NDVAAPVVRRVKVTVNYPPYISEAKGTGVPV-GQKG 239
Query: 159 QLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLK----NISTDTSGYYICTSS 214
L C++ P+ ++ W + + E +P K N+S G Y C +S
Sbjct: 240 TLQCEAS-AVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVAS 298
Query: 215 NEEG 218
N+ G
Sbjct: 299 NKLG 302
>gi|221316757 neurotrimin isoform 3 [Homo sapiens]
Length = 355
Score = 57.4 bits (137), Expect = 2e-08
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 29 DVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYIHGELYKNR 88
D + QG+S TL CT + R + +L ++ + P R
Sbjct: 43 DNVTVRQGESATLRCTIDNRVT-RVAWLNRSTILYAGNDKWCLDP--------------R 87
Query: 89 VSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGI 148
V + +N Q+ SI I + + D G Y CSV +D T SRV L+V V P E
Sbjct: 88 VVLLSNT-QTQYSIEIQNVDVYDEGPYTCSVQ--TDNHPKT-SRVHLIVQVSPKIVEISS 143
Query: 149 EGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGY 208
+ GNNI LTC + G P P +W+ + + + + + + ++ I+ + SG
Sbjct: 144 DISINEGNNISLTCIA-TGRPEPTVTWRHIS----PKAVGFVSEDEYLEIQGITREQSGD 198
Query: 209 YICTSSNEEGTQFC-NITVAVR-SPSMNVALYVGIAVG 244
Y C++SN+ + V V P ++ A G+ VG
Sbjct: 199 YECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVG 236
Score = 39.3 bits (90), Expect = 0.005
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 99 DASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNI 158
D + I +T +G YECS S +D+ RV++ V PP E G + G
Sbjct: 183 DEYLEIQGITREQSGDYECSAS--NDVAAPVVRRVKVTVNYPPYISEAKGTGVPV-GQKG 239
Query: 159 QLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLK----NISTDTSGYYICTSS 214
L C++ P+ ++ W + + E +P K N+S G Y C +S
Sbjct: 240 TLQCEAS-AVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVAS 298
Query: 215 NEEG 218
N+ G
Sbjct: 299 NKLG 302
>gi|115298665 neurotrimin isoform 2 [Homo sapiens]
Length = 344
Score = 57.4 bits (137), Expect = 2e-08
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 29 DVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYIHGELYKNR 88
D + QG+S TL CT + R + +L ++ + P R
Sbjct: 43 DNVTVRQGESATLRCTIDNRVT-RVAWLNRSTILYAGNDKWCLDP--------------R 87
Query: 89 VSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGI 148
V + +N Q+ SI I + + D G Y CSV +D T SRV L+V V P E
Sbjct: 88 VVLLSNT-QTQYSIEIQNVDVYDEGPYTCSVQ--TDNHPKT-SRVHLIVQVSPKIVEISS 143
Query: 149 EGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGY 208
+ GNNI LTC + G P P +W+ + + + + + + ++ I+ + SG
Sbjct: 144 DISINEGNNISLTCIA-TGRPEPTVTWRHIS----PKAVGFVSEDEYLEIQGITREQSGD 198
Query: 209 YICTSSNEEGTQFC-NITVAVR-SPSMNVALYVGIAVG 244
Y C++SN+ + V V P ++ A G+ VG
Sbjct: 199 YECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVG 236
Score = 39.3 bits (90), Expect = 0.005
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 99 DASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNI 158
D + I +T +G YECS S +D+ RV++ V PP E G + G
Sbjct: 183 DEYLEIQGITREQSGDYECSAS--NDVAAPVVRRVKVTVNYPPYISEAKGTGVPV-GQKG 239
Query: 159 QLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLK----NISTDTSGYYICTSS 214
L C++ P+ ++ W + + E +P K N+S G Y C +S
Sbjct: 240 TLQCEAS-AVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVAS 298
Query: 215 NEEG 218
N+ G
Sbjct: 299 NKLG 302
>gi|7705413 neurotrimin isoform 1 [Homo sapiens]
Length = 344
Score = 57.4 bits (137), Expect = 2e-08
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 29 DVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYIHGELYKNR 88
D + QG+S TL CT + R + +L ++ + P R
Sbjct: 43 DNVTVRQGESATLRCTIDNRVT-RVAWLNRSTILYAGNDKWCLDP--------------R 87
Query: 89 VSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGI 148
V + +N Q+ SI I + + D G Y CSV +D T SRV L+V V P E
Sbjct: 88 VVLLSNT-QTQYSIEIQNVDVYDEGPYTCSVQ--TDNHPKT-SRVHLIVQVSPKIVEISS 143
Query: 149 EGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGY 208
+ GNNI LTC + G P P +W+ + + + + + + ++ I+ + SG
Sbjct: 144 DISINEGNNISLTCIA-TGRPEPTVTWRHIS----PKAVGFVSEDEYLEIQGITREQSGD 198
Query: 209 YICTSSNEEGTQFC-NITVAVR-SPSMNVALYVGIAVG 244
Y C++SN+ + V V P ++ A G+ VG
Sbjct: 199 YECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVG 236
Score = 39.3 bits (90), Expect = 0.005
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 99 DASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNI 158
D + I +T +G YECS S +D+ RV++ V PP E G + G
Sbjct: 183 DEYLEIQGITREQSGDYECSAS--NDVAAPVVRRVKVTVNYPPYISEAKGTGVPV-GQKG 239
Query: 159 QLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLK----NISTDTSGYYICTSS 214
L C++ P+ ++ W + + E +P K N+S G Y C +S
Sbjct: 240 TLQCEAS-AVPSAEFQWYKDDKRLIEGKKGVKVENRPFLSKLIFFNVSEHDYGNYTCVAS 298
Query: 215 NEEG 218
N+ G
Sbjct: 299 NKLG 302
>gi|66346706 neuronal growth regulator 1 [Homo sapiens]
Length = 354
Score = 56.2 bits (134), Expect = 4e-08
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 88 RVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECG 147
RVSIS + D S+ I + + D+G Y CSV +V L V VPP +
Sbjct: 90 RVSIST-LNKRDYSLQIQNVDVTDDGPYTCSVQTQ---HTPRTMQVHLTVQVPPKIYDIS 145
Query: 148 IEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQP-ASGQPVSLKNISTDTS 206
+ G N+ LTC + G P P SW+ + P A+P +GQ + + I+ D +
Sbjct: 146 NDMTVNEGTNVTLTCLA-TGKPEPSISWRHIS------PSAKPFENGQYLDIYGITRDQA 198
Query: 207 GYYICTSSNE 216
G Y C++ N+
Sbjct: 199 GEYECSAEND 208
>gi|222136611 poliovirus receptor-related 4 [Homo sapiens]
Length = 510
Score = 55.8 bits (133), Expect = 5e-08
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 160 LTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGT 219
L C S EG P P Y+W R L+ P G + ++T+ SG Y+C SNE +
Sbjct: 268 LKCLS-EGQPPPSYNWTR---LDGPLPSGVRVDGDTLGFPPLTTEHSGIYVCHVSNEFSS 323
Query: 220 QFCNITVAVRSPSMNVALYVG------IAVGVVAALIIIGIIIYCCCCRGKDDNTEDKED 273
+ +TV V P + V + VGV+AAL+ +++ + +
Sbjct: 324 RDSQVTVDVLDPQEDSGKQVDLVSASVVVVGVIAALLFCLLVVVVVLM-----SRYHRRK 378
Query: 274 ARPNREAYEEPPEQLRE--LSREREEEDDYRQEEQRSTGRESPDHLD 318
A+ + YEE RE + R D R + + S G + H D
Sbjct: 379 AQQMTQKYEEELTLTRENSIRRLHSHHTDPRSQPEESVGLRAEGHPD 425
Score = 53.5 bits (127), Expect = 2e-07
Identities = 50/180 (27%), Positives = 74/180 (41%), Gaps = 12/180 (6%)
Query: 4 KMW-PVLWTLCAVRVT-----VDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQ 57
+MW P W L + + A +ET DV+ G+ LPC Y + + G +
Sbjct: 8 EMWGPEAWLLLLLLLASFTGRCPAGELET-SDVVTVVLGQDAKLPCFYRGDSGEQVGQVA 66
Query: 58 WDKLLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQS-DASITIDQLTMADNGTYE 116
W ++ + + S Y+ RV D S+ + AD G YE
Sbjct: 67 WARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGEYE 126
Query: 117 CSVSLMSDLEGNTKSRVRLLVLVPP-SKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSW 175
C VS G+ ++R+RL VLVPP G E G + +C + EGSP P +W
Sbjct: 127 CRVSTFP--AGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASC-TAEGSPAPSVTW 183
>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
precursor [Homo sapiens]
Length = 2012
Score = 55.5 bits (132), Expect = 6e-08
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 34/235 (14%)
Query: 7 PVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHT 66
P L T +V VTV P + R S G+ V +PC + I W K
Sbjct: 581 PQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCV--VVSGDLPITITWQK------ 632
Query: 67 ERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLE 126
G + ++ + +S+ I L++ NG Y C + +
Sbjct: 633 --------------DGRPIPGSLGVTIDNIDFTSSLRISNLSLMHNGNYTC---IARNEA 675
Query: 127 GNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWK--RYNILNQE 184
+ + +L+V VPP + + I G + L C S EG P P WK + + Q
Sbjct: 676 AAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNC-SAEGYPVPTIVWKFSKGAGVPQF 734
Query: 185 QPLA-----QPASGQPVSLKNISTDTSGYYICTSSNEEGTQFC-NITVAVRSPSM 233
QP+A Q S + +K++ + SGYY+C SN+ G ++ + V+ P+M
Sbjct: 735 QPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAM 789
Score = 38.9 bits (89), Expect = 0.006
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 115 YECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEG----ETIIGNNIQLTCQSKEGSPT 170
Y C E + RL V P + ++G + + G ++L C++ G P
Sbjct: 195 YRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQRVELPCKAL-GHPE 253
Query: 171 PQYSWKRYNI-LNQEQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGT 219
P Y W + N+ L + +G + ++NI SG Y+C SN GT
Sbjct: 254 PDYRWLKDNMPLELSGRFQKTVTG--LLIENIRPSDSGSYVCEVSNRYGT 301
Score = 33.9 bits (76), Expect = 0.20
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 27/148 (18%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPEC-GIEGETIIG--NN 157
++ +D + +D G Y+C V + ++ + V++ P+ E ++
Sbjct: 369 NLIMDHMVKSDGGAYQCFVR-----KDKLSAQDYVQVVLEDGTPKIISAFSEKVVSPAEP 423
Query: 158 IQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS----------GQPVSLKNISTDT-- 205
+ L C K G+P P +W + P+ + S G VS NIS+
Sbjct: 424 VSLMCNVK-GTPLPTITWTL-----DDDPILKGGSHRISQMITSEGNVVSYLNISSSQVR 477
Query: 206 -SGYYICTSSNEEGTQFCNITVAVRSPS 232
G Y CT++N G + VR P+
Sbjct: 478 DGGVYRCTANNSAGVVLYQARINVRGPA 505
Score = 32.7 bits (73), Expect = 0.44
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 89 VSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGI 148
+ +S +++ + I+ + +D+G+Y C V S+ G K RL V P
Sbjct: 265 LELSGRFQKTVTGLLIENIRPSDSGSYVCEV---SNRYGTAKVIGRLYVKQPLKATISPR 321
Query: 149 EGETIIGNNIQLTCQSKEGSPTPQYSWKR 177
+ ++ +G+ + L+C S G+ + SW R
Sbjct: 322 KVKSSVGSQVSLSC-SVTGTEDQELSWYR 349
>gi|40254891 hypothetical protein FLJ20674 [Homo sapiens]
Length = 540
Score = 55.1 bits (131), Expect = 8e-08
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 155 GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS---------GQPVSLKNISTDT 205
G N+ LTCQ P + W R L Q + + QP+S +++ N S D
Sbjct: 324 GGNVTLTCQVSGAYPPAKILWLRN--LTQPEVIIQPSSRHLITQDGQNSTLTIHNCSQDL 381
Query: 206 S-GYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAALIIIGIIIYC------ 258
GYYIC + + G + I ++V+ P L +G VG + +L+++G+ I
Sbjct: 382 DEGYYICRADSPVGVREMEIWLSVKEP-----LNIGGIVGTIVSLLLLGLAIISGLLLHY 436
Query: 259 ----CCCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDDYRQEEQRSTGRE 312
C G ++ +D ++ EE E+ E EEED E++ + RE
Sbjct: 437 SPVFCWKVGNTSRGQNMDDVMVLVDSEEEEEEE------EEEEEDAAVGEQEGARERE 488
Score = 30.0 bits (66), Expect = 2.8
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 113 GTYECSVSLMSDLEGNTKSRVRLLVLVPP-SKPECGIEGETIIGN-NIQLTCQSKEGSPT 170
G Y C ++L + + K LLV PP S P+C + + G+ +QLTC+ G P
Sbjct: 197 GNYTC-LALNQLSKRHRKVTTELLVYYPPPSAPQCWAQMAS--GSFMLQLTCRWDGGYPD 253
Query: 171 PQYSW 175
P + W
Sbjct: 254 PDFLW 258
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 54.3 bits (129), Expect = 1e-07
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 88 RVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECG 147
R+ +SN + ++T+ +T D Y C + + + N V L VL P P
Sbjct: 546 RLQLSNG----NRTLTLFNVTRNDARAYVCGIQ--NSVSANRSDPVTLDVLYGPDTPIIS 599
Query: 148 IEGETII-GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTS 206
+ + G N+ L+C S +P+PQYSW+ I Q Q + + I+ + +
Sbjct: 600 PPDSSYLSGANLNLSCHSAS-NPSPQYSWRINGIPQQHT--------QVLFIAKITPNNN 650
Query: 207 GYYIC------TSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAALIII 252
G Y C T N + ++ + SP ++ VGI +GV+ + +I
Sbjct: 651 GTYACFVSNLATGRNNSIVKSITVSASGTSPGLSAGATVGIMIGVLVGVALI 702
Score = 42.4 bits (98), Expect = 6e-04
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 20/149 (13%)
Query: 88 RVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECG 147
R+ +SN + ++T+ +T D +Y+C + + V L VL P P
Sbjct: 190 RLQLSNG----NRTLTLFNVTRNDTASYKCETQ--NPVSARRSDSVILNVLYGPDAPTIS 243
Query: 148 -IEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTS 206
+ G N+ L+C + P QYSW Q S Q + + NI+ + S
Sbjct: 244 PLNTSYRSGENLNLSCHAASNPPA-QYSWFVNGTFQQ--------STQELFIPNITVNNS 294
Query: 207 GYYICTSSNEE----GTQFCNITVAVRSP 231
G Y C + N + T ITV P
Sbjct: 295 GSYTCQAHNSDTGLNRTTVTTITVYAEPP 323
Score = 41.6 bits (96), Expect = 0.001
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 20/154 (12%)
Query: 88 RVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECG 147
R+ +SN+ + ++T+ +T D G YEC + + L + V L VL P P
Sbjct: 368 RLQLSND----NRTLTLLSVTRNDVGPYECGIQ--NKLSVDHSDPVILNVLYGPDDPTIS 421
Query: 148 IEGETII-GNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNISTDTS 206
G N+ L+C + P QYSW + Q Q + + NI+ S
Sbjct: 422 PSYTYYRPGVNLSLSCHAASNPPA-QYSWLIDGNIQQHT--------QELFISNITEKNS 472
Query: 207 GYYICTSSNEEG----TQFCNITVAVRSPSMNVA 236
G Y C ++N T ITV+ P +++
Sbjct: 473 GLYTCQANNSASGHSRTTVKTITVSAELPKPSIS 506
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 54.3 bits (129), Expect = 1e-07
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQL 160
++ +D LT D+G Y C + GN + ++LV VPP + G + Q
Sbjct: 6071 ALILDSLTGVDSGQYMC---FAASAAGNCSTLGKILVQVPPRFVNKVRASPFVEGEDAQF 6127
Query: 161 TCQSKEGSPTPQYSWKRYNIL----NQEQPLAQPASGQPV-SLKNISTDTSGYYICTSSN 215
TC + EG+P PQ W + L N+ Q L++P SG V ++ S + G Y C N
Sbjct: 6128 TC-TIEGAPYPQIRWYKDGALLTTGNKFQTLSEPRSGLLVLVIRAASKEDLGLYECELVN 6186
Query: 216 EEGTQFCNITVAVRSPSM 233
G+ + + ++SP +
Sbjct: 6187 RLGSARASAELRIQSPML 6204
Score = 38.5 bits (88), Expect = 0.008
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 154 IGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQP--------LAQPASGQPVSLKNISTDT 205
+G + L+CQ G+PTPQ SW++ +QP LAQ +++ +++
Sbjct: 23 VGKDATLSCQIV-GNPTPQVSWEK-----DQQPVAAGARFRLAQDGDLYRLTILDLALGD 76
Query: 206 SGYYICTSSNEEGTQFCNITVAV 228
SG Y+C + N G F + + V
Sbjct: 77 SGQYVCRARNAIGEAFAAVGLQV 99
Score = 36.6 bits (83), Expect = 0.030
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 140 PPSKPECGIEGETII-GNNIQLTCQSKEGSPTPQYSWKRYNILNQE--QPLAQPASGQPV 196
P S P G T+ G + +L+C G P P+ WK+ L E + + + +
Sbjct: 236 PASPPSTGTRTCTVTEGKHARLSCYVT-GEPKPETVWKKDGQLVTEGRRHVVYEDAQENF 294
Query: 197 SLKNISTDTS--GYYICTSSNEEGTQFCNITVAVRSPSM 233
LK + S G Y CT+SN G + ++ V VR P++
Sbjct: 295 VLKILFCKQSDRGLYTCTASNLVGQTYSSVLVVVREPAV 333
Score = 33.5 bits (75), Expect = 0.26
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 30/154 (19%)
Query: 101 SITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLV-----------------LVPPSK 143
++ I +T D+G Y + +S+ G S RLLV LVPP
Sbjct: 5317 TLEIISVTREDSGQY---AAYISNAMGAAYSSARLLVRGPDEPEEKPASDVHEQLVPPRM 5373
Query: 144 PECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNI------LNQEQP---LAQPASGQ 194
E + G++I + + EG P P W R + + P +A A
Sbjct: 5374 LERFTPKKVKKGSSITFSVKV-EGRPVPTVHWLREEAERGVLWIGPDTPGYTVASSAQQH 5432
Query: 195 PVSLKNISTDTSGYYICTSSNEEGTQFCNITVAV 228
+ L ++ G Y C +SN G C+ ++ V
Sbjct: 5433 SLVLLDVGRQHQGTYTCIASNAAGQALCSASLHV 5466
Score = 32.3 bits (72), Expect = 0.57
Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 29/181 (16%)
Query: 34 SQGKSVTLPCTYHTSTSSREGLIQWDKLLLTHTERVVIWPFSNKNYIHGELYKNRVSISN 93
++GK L C Y T E + + D L+T R V++ + +N++ L+ +
Sbjct: 250 TEGKHARLSC-YVTGEPKPETVWKKDGQLVTEGRRHVVYEDAQENFVLKILFCKQ----- 303
Query: 94 NAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPECGIEGETI 153
+D G Y C+ S +L G T S V L+V+ P+ P +
Sbjct: 304 ----------------SDRGLYTCTAS---NLVGQTYSSV-LVVVREPAVPFKKRLQDLE 343
Query: 154 IGNNIQLTCQSKEGSPTPQYSWKRYNI---LNQEQPLAQPASGQPVSLKNISTDTSGYYI 210
+ T + P+ + +W + + + + + + + ++++N+S D YI
Sbjct: 344 VREKESATFLCEVPQPSTEAAWFKEETRLWASAKYGIEEEGTERRLTVRNVSADDDAVYI 403
Query: 211 C 211
C
Sbjct: 404 C 404
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,133,620
Number of Sequences: 37866
Number of extensions: 615707
Number of successful extensions: 5614
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 333
Number of HSP's that attempted gapping in prelim test: 3913
Number of HSP's gapped (non-prelim): 1621
length of query: 319
length of database: 18,247,518
effective HSP length: 102
effective length of query: 217
effective length of database: 14,385,186
effective search space: 3121585362
effective search space used: 3121585362
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.