Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ASAM Sequence: fasta or formatted (373aa) NCBI GI: 13376115
Description:

adipocyte-specific adhesion molecule

Referenced in:

Adipose Tissue
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         23           2
 C cysteine            1.6          6           1
 D aspartate           2.9         11           1
 E glutamate           8.8         33           4
 F phenylalanine       1.1          4           1
 G glycine             6.7         25           1
 H histidine           2.1          8           2
 I isoleucine          3.8         14           1
 K lysine              5.6         21           2
 L leucine            10.7         40           7
 M methionine          1.1          4           1
 N asparagine          3.2         12           2
 P proline             5.1         19           2
 Q glutamine           4.0         15           1
 R arginine            6.7         25           2
 S serine             11.0         41           5
 T threonine           6.7         25           2
 V valine              7.8         29           2
 W tryptophan          1.1          4           1
 Y tyrosine            3.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adipocyte-specific adhesion molecule 
CXADR                 0.209   coxsackie virus and adenovirus receptor precursor [Ho...
IGSF11                0.139   immunoglobulin superfamily, member 11 isoform b [Hom...
IGSF11                0.139   immunoglobulin superfamily, member 11 isoform a [Hom...
GPA33                 0.125   transmembrane glycoprotein A33 precursor 
VSIG2                 0.120   V-set and immunoglobulin domain containing 2 
ESAM                  0.115   endothelial cell adhesion molecule 
VSIG1                 0.113   V-set and immunoglobulin domain containing 1 
VSIG8                 0.109   V-set and immunoglobulin domain containing 8 
JAM3                  0.063   junctional adhesion molecule 3 precursor 
F11R                  0.056   F11 receptor precursor 
LSAMP                 0.053   limbic system-associated membrane protein 
PXDN                  0.049   peroxidasin 
CD2                   0.046   CD2 molecule 
NTM                   0.045   neurotrimin isoform 4 
NTM                   0.045   neurotrimin isoform 3 
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN2                 0.045   PREDICTED: hemicentin 2 
NTM                   0.045   neurotrimin isoform 2 
NTM                   0.045   neurotrimin isoform 1 
LRIG1                 0.045   leucine-rich repeats and immunoglobulin-like domains...
TTN                   0.045   titin isoform N2-A 
JAM2                  0.042   junctional adhesion molecule 2 precursor 
HMCN2                 0.042   PREDICTED: hemicentin 2 
OPCML                 0.042   opioid binding protein/cell adhesion molecule-like i...
OPCML                 0.042   opioid binding protein/cell adhesion molecule-like is...
CD22                  0.041   CD22 molecule 
LOC100292387          0.041   PREDICTED: similar to hemicentin 2 
LOC100289200          0.041   PREDICTED: hypothetical protein XP_002342997 
FCRL3                 0.041   Fc receptor-like 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press