Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ESAM Sequence: fasta or formatted (390aa) NCBI GI: 148664205
Description:

endothelial cell adhesion molecule

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         31           2
 C cysteine            1.3          5           1
 D aspartate           2.3          9           1
 E glutamate           3.6         14           2
 F phenylalanine       2.1          8           2
 G glycine             8.5         33           2
 H histidine           2.1          8           1
 I isoleucine          2.3          9           1
 K lysine              3.6         14           1
 L leucine            12.3         48           2
 M methionine          1.5          6           1
 N asparagine          3.1         12           1
 P proline            10.5         41           2
 Q glutamine           5.1         20           1
 R arginine            4.6         18           2
 S serine             11.5         45           3
 T threonine           5.1         20           2
 V valine              9.5         37           2
 W tryptophan          1.3          5           1
 Y tyrosine            1.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   endothelial cell adhesion molecule 
IGSF11                0.133   immunoglobulin superfamily, member 11 isoform b [Hom...
IGSF11                0.131   immunoglobulin superfamily, member 11 isoform a [Hom...
CXADR                 0.127   coxsackie virus and adenovirus receptor precursor [Ho...
VSIG2                 0.119   V-set and immunoglobulin domain containing 2 
ASAM                  0.109   adipocyte-specific adhesion molecule 
GPA33                 0.107   transmembrane glycoprotein A33 precursor 
VSIG1                 0.102   V-set and immunoglobulin domain containing 1 
JAM2                  0.066   junctional adhesion molecule 2 precursor 
VSIG8                 0.064   V-set and immunoglobulin domain containing 8 
F11R                  0.052   F11 receptor precursor 
CEACAM6               0.049   carcinoembryonic antigen-related cell adhesion molec...
JAM3                  0.044   junctional adhesion molecule 3 precursor 
FLJ20674              0.040   hypothetical protein FLJ20674 
HEPACAM2              0.040   HEPACAM family member 2 isoform 2 
HEPACAM2              0.038   HEPACAM family member 2 isoform 1 
HSPG2                 0.038   heparan sulfate proteoglycan 2 
CADM4                 0.037   cell adhesion molecule 4 
LOC100292387          0.037   PREDICTED: similar to hemicentin 2 
HMCN2                 0.037   PREDICTED: hemicentin 2 
LOC100289200          0.037   PREDICTED: hypothetical protein XP_002342997 
NEGR1                 0.037   neuronal growth regulator 1 
HMCN1                 0.036   hemicentin 1 
CEACAM8               0.034   carcinoembryonic antigen-related cell adhesion molec...
LRIG1                 0.034   leucine-rich repeats and immunoglobulin-like domains...
FCRL2                 0.033   Fc receptor-like 2 precursor 
CEACAM20              0.033   carcinoembryonic antigen-related cell adhesion mole...
CEACAM20              0.033   carcinoembryonic antigen-related cell adhesion mole...
TTN                   0.032   titin isoform N2-A 
HMCN2                 0.032   PREDICTED: hemicentin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press