Guide to the Human Genome
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Name: PVRL4 Sequence: fasta or formatted (510aa) NCBI GI: 222136611
Description:

poliovirus receptor-related 4

Referenced in:

Additional Immunoglobulin-related Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         33           2
 C cysteine            1.8          9           1
 D aspartate           4.3         22           1
 E glutamate           8.4         43           4
 F phenylalanine       2.2         11           1
 G glycine             8.6         44           1
 H histidine           3.3         17           2
 I isoleucine          2.0         10           1
 K lysine              2.2         11           1
 L leucine            11.4         58           7
 M methionine          1.6          8           1
 N asparagine          2.5         13           1
 P proline             6.9         35           4
 Q glutamine           4.7         24           2
 R arginine            6.3         32           2
 S serine              9.6         49           2
 T threonine           5.7         29           2
 V valine              9.0         46           5
 W tryptophan          1.2          6           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poliovirus receptor-related 4 
PVRL3                 0.167   poliovirus receptor-related 3 
PVRL1                 0.125   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.125   poliovirus receptor-related 1 isoform 1 
PVRL1                 0.113   poliovirus receptor-related 1 isoform 3 
PVR                   0.105   poliovirus receptor isoform delta 
PVR                   0.105   poliovirus receptor isoform alpha 
PVR                   0.100   poliovirus receptor isoform beta 
PVRL2                 0.099   poliovirus receptor related 2 isoform delta precurs...
PVR                   0.099   poliovirus receptor isoform gamma 
PVRL2                 0.091   poliovirus receptor related 2 isoform alpha precursor...
CADM1                 0.066   immunoglobulin superfamily, member 4D isoform 2 [Ho...
CADM1                 0.059   immunoglobulin superfamily, member 4D isoform 1 [Ho...
CADM3                 0.058   cell adhesion molecule 3 isoform 2 
CADM3                 0.055   cell adhesion molecule 3 isoform 1 
LRIG2                 0.052   leucine-rich repeats and immunoglobulin-like domains ...
LRIG3                 0.049   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.049   leucine-rich repeats and immunoglobulin-like domain...
CADM4                 0.046   cell adhesion molecule 4 
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN2                 0.045   PREDICTED: hemicentin 2 
HSPG2                 0.044   heparan sulfate proteoglycan 2 
LOC100292387          0.042   PREDICTED: similar to hemicentin 2 
LRIG1                 0.040   leucine-rich repeats and immunoglobulin-like domains...
HMCN1                 0.039   hemicentin 1 
KIRREL2               0.038   kin of IRRE-like 2 isoform c 
KIRREL2               0.038   kin of IRRE-like 2 isoform a 
BCAM                  0.037   basal cell adhesion molecule isoform 2 precursor [Ho...
BCAM                  0.037   basal cell adhesion molecule isoform 1 precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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