Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MTOR Sequence: fasta or formatted (2549aa) NCBI GI: 4826730
Description:

FK506 binding protein 12-rapamycin associated protein 1

Referenced in:

Cardiovascular System
mTOR Pathway
Additional Membrane Functions
Oxygen Sensing and Hemoglobin
Peptidylprolyl Isomerases
RNases and RNA Stability
Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0        205           5
 C cysteine            1.4         36           2
 D aspartate           5.1        129           2
 E glutamate           6.6        167           3
 F phenylalanine       3.3         84           3
 G glycine             4.9        124           2
 H histidine           3.3         83           3
 I isoleucine          5.2        133           3
 K lysine              5.1        130           3
 L leucine            12.5        319           3
 M methionine          3.7         94           2
 N asparagine          3.3         84           2
 P proline             4.3        110           2
 Q glutamine           5.3        136           3
 R arginine            6.0        153           2
 S serine              6.3        161           3
 T threonine           5.5        139           3
 V valine              6.2        158           2
 W tryptophan          1.6         40           2
 Y tyrosine            2.5         64           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 12-rapamycin associated protein... 
SMG1                  0.040   PI-3-kinase-related kinase SMG-1 
ATR                   0.034   ataxia telangiectasia and Rad3 related protein [Hom...
LOC648152             0.034   PREDICTED: similar to ataxia telangiectasia and Rad...
ATM                   0.030   ataxia telangiectasia mutated isoform 2 
ATM                   0.030   ataxia telangiectasia mutated isoform 1 
LOC651610             0.030   PREDICTED: similar to Serine-protein kinase ATM, pa...
PRKDC                 0.025   protein kinase, DNA-activated, catalytic polypeptide...
PRKDC                 0.023   protein kinase, DNA-activated, catalytic polypeptid...
LOC731751             0.023   PREDICTED: similar to protein kinase, DNA-activated...
TRRAP                 0.009   transformation/transcription domain-associated protei...
PIK3C3                0.009   catalytic phosphatidylinositol 3-kinase 3 
PIK3CD                0.008   catalytic phosphatidylinositol 3-kinase delta [Homo...
PIK3C2A               0.007   phosphoinositide-3-kinase, class 2 alpha polypeptid...
PIK3C2G               0.007   phosphoinositide-3-kinase, class 2 gamma polypeptid...
PIK3CB                0.006   catalytic phosphatidylinositol 3-kinase beta 
PIK3CA                0.006   phosphoinositide-3-kinase, catalytic, alpha polypept...
PI4KB                 0.006   catalytic phosphatidylinositol 4-kinase beta 
PIK3C2B               0.005   phosphoinositide-3-kinase, class 2 beta polypeptide...
CAND2                 0.005   TBP-interacting protein isoform 1 
LOC651921             0.005   PREDICTED: similar to ataxia telangiectasia and Rad...
PI4KA                 0.005   phosphatidylinositol 4-kinase type 3 alpha isoform 1 ...
PI4KA                 0.005   phosphatidylinositol 4-kinase type 3 alpha isoform ...
LOC100293141          0.005   PREDICTED: similar to phosphatidylinositol 4-kinase...
IPO4                  0.004   importin 4 
PIK3CG                0.004   phosphoinositide-3-kinase, catalytic, gamma polypept...
CAND2                 0.004   TBP-interacting protein isoform 2 
FLJ10357              0.003   hypothetical protein LOC55701 
GCN1L1                0.003   GCN1 general control of amino-acid synthesis 1-like ...
KPNB1                 0.003   karyopherin beta 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press