Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PIK3CB Sequence: fasta or formatted (1070aa) NCBI GI: 5453894
Description:

catalytic phosphatidylinositol 3-kinase beta

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         58           5
 C cysteine            2.2         24           2
 D aspartate           5.6         60           2
 E glutamate           6.9         74           3
 F phenylalanine       4.5         48           1
 G glycine             4.7         50           2
 H histidine           2.2         24           1
 I isoleucine          6.1         65           2
 K lysine              7.6         81           2
 L leucine            12.1        129           3
 M methionine          2.8         30           1
 N asparagine          4.8         51           3
 P proline             4.8         51           2
 Q glutamine           4.1         44           2
 R arginine            4.6         49           2
 S serine              6.1         65           2
 T threonine           3.7         40           2
 V valine              6.8         73           2
 W tryptophan          1.6         17           1
 Y tyrosine            3.5         37           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   catalytic phosphatidylinositol 3-kinase beta 
PIK3CD                0.541   catalytic phosphatidylinositol 3-kinase delta [Homo...
PIK3CA                0.332   phosphoinositide-3-kinase, catalytic, alpha polypept...
PIK3CG                0.223   phosphoinositide-3-kinase, catalytic, gamma polypept...
PIK3C2A               0.156   phosphoinositide-3-kinase, class 2 alpha polypeptid...
PIK3C2B               0.151   phosphoinositide-3-kinase, class 2 beta polypeptide...
PIK3C2G               0.120   phosphoinositide-3-kinase, class 2 gamma polypeptid...
PIK3C3                0.068   catalytic phosphatidylinositol 3-kinase 3 
PI4KA                 0.042   phosphatidylinositol 4-kinase type 3 alpha isoform 1 ...
PI4KA                 0.042   phosphatidylinositol 4-kinase type 3 alpha isoform ...
PI4KB                 0.037   catalytic phosphatidylinositol 4-kinase beta 
LOC100293141          0.023   PREDICTED: similar to phosphatidylinositol 4-kinase...
PRKDC                 0.019   protein kinase, DNA-activated, catalytic polypeptide...
ATM                   0.016   ataxia telangiectasia mutated isoform 2 
ATM                   0.016   ataxia telangiectasia mutated isoform 1 
LOC651610             0.016   PREDICTED: similar to Serine-protein kinase ATM, pa...
SMG1                  0.015   PI-3-kinase-related kinase SMG-1 
MTOR                  0.014   FK506 binding protein 12-rapamycin associated protein...
PRKDC                 0.014   protein kinase, DNA-activated, catalytic polypeptid...
LOC731751             0.014   PREDICTED: similar to protein kinase, DNA-activated...
ATR                   0.011   ataxia telangiectasia and Rad3 related protein [Hom...
LOC648152             0.011   PREDICTED: similar to ataxia telangiectasia and Rad...
UTRN                  0.004   utrophin 
AKAP1                 0.004   A-kinase anchor protein 1 precursor 
BIRC6                 0.004   baculoviral IAP repeat-containing 6 
PRKCQ                 0.003   protein kinase C, theta 
CDH6                  0.003   cadherin 6, type 2 preproprotein 
OCM2                  0.002   oncomodulin-like 
OCM                   0.002   oncomodulin 
RSBN1L                0.002   round spermatid basic protein 1-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press