ATM 11999

Name: ATM	Sequence: fasta or formatted (1708aa)		NCBI GI: 20336199
Description: ataxia telangiectasia mutated isoform 2		Referenced in: DNases, Recombination, and DNA Repair Additional Serine / Threonine Protein Kinases
Other entries for this name: alt prot [3056aa] ataxia telangiectasia mutated isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 93 2 C cysteine 2.6 45 2 D aspartate 5.4 92 2 E glutamate 7.6 130 2 F phenylalanine 3.8 65 2 G glycine 4.2 72 3 H histidine 2.3 40 2 I isoleucine 5.7 98 2 K lysine 6.9 118 2 L leucine 12.1 206 3 M methionine 2.7 46 2 N asparagine 4.2 71 2 P proline 3.3 57 2 Q glutamine 5.2 88 2 R arginine 5.3 90 2 S serine 6.9 118 2 T threonine 5.6 95 2 V valine 6.2 106 3 W tryptophan 1.3 23 1 Y tyrosine 3.2 55 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ataxia telangiectasia mutated isoform 2 ATM 1.000 ataxia telangiectasia mutated isoform 1 LOC651610 0.999 PREDICTED: similar to Serine-protein kinase ATM, pa... ATR 0.060 ataxia telangiectasia and Rad3 related protein [Hom... LOC648152 0.058 PREDICTED: similar to ataxia telangiectasia and Rad... MTOR 0.045 FK506 binding protein 12-rapamycin associated protein... SMG1 0.044 PI-3-kinase-related kinase SMG-1 PRKDC 0.032 protein kinase, DNA-activated, catalytic polypeptide... LOC651921 0.028 PREDICTED: similar to ataxia telangiectasia and Rad... PRKDC 0.026 protein kinase, DNA-activated, catalytic polypeptid... LOC731751 0.026 PREDICTED: similar to protein kinase, DNA-activated... PIK3C3 0.014 catalytic phosphatidylinositol 3-kinase 3 PIK3CB 0.010 catalytic phosphatidylinositol 3-kinase beta PIK3CD 0.008 catalytic phosphatidylinositol 3-kinase delta [Homo... PIK3CG 0.008 phosphoinositide-3-kinase, catalytic, gamma polypept... TRRAP 0.008 transformation/transcription domain-associated protei... PI4KB 0.007 catalytic phosphatidylinositol 4-kinase beta PIK3C2G 0.007 phosphoinositide-3-kinase, class 2 gamma polypeptid... PIK3CA 0.006 phosphoinositide-3-kinase, catalytic, alpha polypept... C14orf38 0.005 PREDICTED: hypothetical protein C14orf38 0.005 PREDICTED: hypothetical protein C14orf38 0.005 PREDICTED: hypothetical protein CCDC88A 0.004 coiled-coil domain containing 88A isoform 2 CCDC88A 0.004 coiled-coil domain containing 88A isoform 1 PI4KA 0.004 phosphatidylinositol 4-kinase type 3 alpha isoform 1 ... PI4KA 0.004 phosphatidylinositol 4-kinase type 3 alpha isoform ... LOC100293141 0.004 PREDICTED: similar to phosphatidylinositol 4-kinase... STK17A 0.003 serine/threonine kinase 17a CCDC46 0.003 coiled-coil domain containing 46 isoform a KIF21B 0.003 kinesin family member 21B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.