PRKDC 3510

Name: PRKDC	Sequence: fasta or formatted (4128aa)		NCBI GI: 13654237
Description: protein kinase, DNA-activated, catalytic polypeptide isoform 1		Referenced in: DNases, Recombination, and DNA Repair Serine / Threonine Protein Phosphatases Additional Serine / Threonine Protein Kinases p53 Pathway
Other entries for this name: alt prot [4097aa] protein kinase, DNA-activated, catalytic polypeptide isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 270 4 C cysteine 2.1 87 2 D aspartate 5.1 209 2 E glutamate 7.2 296 3 F phenylalanine 4.7 196 2 G glycine 4.5 187 3 H histidine 2.2 90 2 I isoleucine 4.8 199 3 K lysine 6.7 276 3 L leucine 12.8 530 3 M methionine 2.9 118 2 N asparagine 3.7 153 2 P proline 4.5 187 2 Q glutamine 4.6 188 3 R arginine 5.2 215 3 S serine 7.9 327 3 T threonine 4.4 183 3 V valine 6.1 250 3 W tryptophan 1.2 49 2 Y tyrosine 2.9 118 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protein kinase, DNA-activated, catalytic polypeptide... PRKDC 0.991 protein kinase, DNA-activated, catalytic polypeptid... LOC731751 0.989 PREDICTED: similar to protein kinase, DNA-activated... ATR 0.016 ataxia telangiectasia and Rad3 related protein [Hom... LOC648152 0.016 PREDICTED: similar to ataxia telangiectasia and Rad... MTOR 0.015 FK506 binding protein 12-rapamycin associated protein... ATM 0.013 ataxia telangiectasia mutated isoform 2 ATM 0.013 ataxia telangiectasia mutated isoform 1 LOC651610 0.013 PREDICTED: similar to Serine-protein kinase ATM, pa... SMG1 0.012 PI-3-kinase-related kinase SMG-1 TRRAP 0.006 transformation/transcription domain-associated protei... PIK3CD 0.006 catalytic phosphatidylinositol 3-kinase delta [Homo... PIK3CG 0.006 phosphoinositide-3-kinase, catalytic, gamma polypept... PIK3CB 0.005 catalytic phosphatidylinositol 3-kinase beta LOC651921 0.003 PREDICTED: similar to ataxia telangiectasia and Rad... PIK3C3 0.003 catalytic phosphatidylinositol 3-kinase 3 PI4KB 0.003 catalytic phosphatidylinositol 4-kinase beta PIK3CA 0.002 phosphoinositide-3-kinase, catalytic, alpha polypept... PIK3C2G 0.002 phosphoinositide-3-kinase, class 2 gamma polypeptid... PIK3C2B 0.002 phosphoinositide-3-kinase, class 2 beta polypeptide... PIK3C2A 0.002 phosphoinositide-3-kinase, class 2 alpha polypeptid... XPO4 0.001 exportin 4 CCDC135 0.001 coiled-coil domain containing 135 FASTKD1 0.001 FAST kinase domains 1 CENPI 0.001 centromere protein I TMC3 0.001 transmembrane channel-like 3 DZIP1L 0.001 DAZ interacting protein 1-like PI4KA 0.001 phosphatidylinositol 4-kinase type 3 alpha isoform 1 ... PI4KA 0.001 phosphatidylinositol 4-kinase type 3 alpha isoform ... PLCB1 0.001 phosphoinositide-specific phospholipase C beta 1 iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.