Guide to the Human Genome
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Name: PI4KA Sequence: fasta or formatted (2044aa) NCBI GI: 155030226
Description:

phosphatidylinositol 4-kinase type 3 alpha isoform 2

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [854aa] phosphatidylinositol 4-kinase type 3 alpha isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        141           2
 C cysteine            2.1         43           2
 D aspartate           5.6        114           2
 E glutamate           5.8        119           3
 F phenylalanine       4.3         87           2
 G glycine             4.8         98           2
 H histidine           2.3         48           2
 I isoleucine          5.8        119           2
 K lysine              6.0        122           2
 L leucine            11.6        237           3
 M methionine          3.2         66           2
 N asparagine          3.4         69           1
 P proline             5.4        110           3
 Q glutamine           4.4         89           2
 R arginine            4.7         97           3
 S serine              8.0        164           3
 T threonine           4.4         90           2
 V valine              6.1        125           3
 W tryptophan          1.3         27           1
 Y tyrosine            3.9         79           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol 4-kinase type 3 alpha isoform ... 
PI4KA                 0.419   phosphatidylinositol 4-kinase type 3 alpha isoform 1 ...
LOC100293141          0.090   PREDICTED: similar to phosphatidylinositol 4-kinase...
PI4KB                 0.041   catalytic phosphatidylinositol 4-kinase beta 
PIK3CA                0.032   phosphoinositide-3-kinase, catalytic, alpha polypept...
PIK3CG                0.027   phosphoinositide-3-kinase, catalytic, gamma polypept...
PIK3C2G               0.027   phosphoinositide-3-kinase, class 2 gamma polypeptid...
PIK3C2B               0.026   phosphoinositide-3-kinase, class 2 beta polypeptide...
PIK3C2A               0.025   phosphoinositide-3-kinase, class 2 alpha polypeptid...
PIK3C3                0.022   catalytic phosphatidylinositol 3-kinase 3 
PIK3CB                0.022   catalytic phosphatidylinositol 3-kinase beta 
PIK3CD                0.021   catalytic phosphatidylinositol 3-kinase delta [Homo...
MTOR                  0.006   FK506 binding protein 12-rapamycin associated protein...
ATR                   0.005   ataxia telangiectasia and Rad3 related protein [Hom...
LOC648152             0.005   PREDICTED: similar to ataxia telangiectasia and Rad...
ATM                   0.003   ataxia telangiectasia mutated isoform 2 
ATM                   0.003   ataxia telangiectasia mutated isoform 1 
LOC651610             0.003   PREDICTED: similar to Serine-protein kinase ATM, pa...
SMG1                  0.003   PI-3-kinase-related kinase SMG-1 
LOC643677             0.003   hypothetical protein LOC643677 
LOC643677             0.003   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.003   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.003   PREDICTED: hypothetical protein LOC643677 
TLR4                  0.002   toll-like receptor 4 precursor 
PRKDC                 0.002   protein kinase, DNA-activated, catalytic polypeptid...
LOC731751             0.002   PREDICTED: similar to protein kinase, DNA-activated...
CEP350                0.002   centrosome-associated protein 350 
URB1                  0.002   nucleolar preribosomal-associated protein 1 
GPR112                0.002   G-protein coupled receptor 112 
PRKDC                 0.002   protein kinase, DNA-activated, catalytic polypeptide...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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