Guide to the Human Genome
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Name: PI4KA Sequence: fasta or formatted (854aa) NCBI GI: 4505807
Description:

phosphatidylinositol 4-kinase type 3 alpha isoform 1

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [2044aa] phosphatidylinositol 4-kinase type 3 alpha isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         60           2
 C cysteine            1.9         16           1
 D aspartate           6.0         51           2
 E glutamate           5.3         45           2
 F phenylalanine       4.8         41           2
 G glycine             5.5         47           2
 H histidine           1.6         14           1
 I isoleucine          6.4         55           2
 K lysine              6.2         53           2
 L leucine             9.5         81           3
 M methionine          3.5         30           1
 N asparagine          3.4         29           1
 P proline             5.7         49           2
 Q glutamine           4.8         41           2
 R arginine            4.9         42           2
 S serine              7.6         65           2
 T threonine           4.8         41           1
 V valine              5.0         43           2
 W tryptophan          1.8         15           1
 Y tyrosine            4.2         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol 4-kinase type 3 alpha isoform 1 ... 
PI4KA                 1.000   phosphatidylinositol 4-kinase type 3 alpha isoform ...
LOC100293141          0.215   PREDICTED: similar to phosphatidylinositol 4-kinase...
PI4KB                 0.098   catalytic phosphatidylinositol 4-kinase beta 
PIK3CA                0.075   phosphoinositide-3-kinase, catalytic, alpha polypept...
PIK3CG                0.065   phosphoinositide-3-kinase, catalytic, gamma polypept...
PIK3C2G               0.065   phosphoinositide-3-kinase, class 2 gamma polypeptid...
PIK3C2B               0.061   phosphoinositide-3-kinase, class 2 beta polypeptide...
PIK3C2A               0.060   phosphoinositide-3-kinase, class 2 alpha polypeptid...
PIK3C3                0.053   catalytic phosphatidylinositol 3-kinase 3 
PIK3CB                0.053   catalytic phosphatidylinositol 3-kinase beta 
PIK3CD                0.051   catalytic phosphatidylinositol 3-kinase delta [Homo...
MTOR                  0.013   FK506 binding protein 12-rapamycin associated protein...
ATR                   0.011   ataxia telangiectasia and Rad3 related protein [Hom...
LOC648152             0.011   PREDICTED: similar to ataxia telangiectasia and Rad...
ATM                   0.008   ataxia telangiectasia mutated isoform 2 
ATM                   0.008   ataxia telangiectasia mutated isoform 1 
LOC651610             0.008   PREDICTED: similar to Serine-protein kinase ATM, pa...
SMG1                  0.008   PI-3-kinase-related kinase SMG-1 
LOC643677             0.006   hypothetical protein LOC643677 
LOC643677             0.006   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.006   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.006   PREDICTED: hypothetical protein LOC643677 
PRKDC                 0.005   protein kinase, DNA-activated, catalytic polypeptid...
LOC731751             0.005   PREDICTED: similar to protein kinase, DNA-activated...
CEP350                0.005   centrosome-associated protein 350 
PRKDC                 0.005   protein kinase, DNA-activated, catalytic polypeptide...
DNHD1                 0.004   dynein heavy chain domain 1 isoform 1 
LOC728905             0.004   PREDICTED: hypothetical protein 
LOC728789             0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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