KPNB1 11615

Name: KPNB1	Sequence: fasta or formatted (876aa)		NCBI GI: 19923142
Description: karyopherin beta 1		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 87 2 C cysteine 2.6 23 2 D aspartate 5.9 52 5 E glutamate 8.2 72 2 F phenylalanine 2.6 23 1 G glycine 4.3 38 2 H histidine 1.5 13 1 I isoleucine 5.6 49 2 K lysine 4.9 43 2 L leucine 11.5 101 3 M methionine 2.7 24 1 N asparagine 4.3 38 2 P proline 4.2 37 2 Q glutamine 6.2 54 2 R arginine 3.7 32 2 S serine 5.6 49 3 T threonine 4.9 43 2 V valine 7.6 67 3 W tryptophan 0.9 8 1 Y tyrosine 2.6 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 karyopherin beta 1 TNPO2 0.056 transportin 2 (importin 3, karyopherin beta 2b) iso... TNPO2 0.056 transportin 2 (importin 3, karyopherin beta 2b) iso... TNPO2 0.056 transportin 2 (importin 3, karyopherin beta 2b) isof... TNPO1 0.055 transportin 1 isoform 2 TNPO1 0.055 transportin 1 isoform 1 IPO5 0.026 importin 5 RANBP6 0.019 RAN binding protein 6 PPP2R1A 0.009 alpha isoform of regulatory subunit A, protein phosp... KPNA6 0.009 karyopherin alpha 6 KPNA5 0.009 karyopherin alpha 5 MTOR 0.008 FK506 binding protein 12-rapamycin associated protein... IPO4 0.008 importin 4 PPP2R1B 0.007 beta isoform of regulatory subunit A, protein phosph... PPP2R1B 0.007 beta isoform of regulatory subunit A, protein phosph... DOCK3 0.005 dedicator of cytokinesis 3 CLASP1 0.005 CLIP-associating protein 1 isoform 3 CLASP1 0.005 CLIP-associating protein 1 isoform 2 CLASP1 0.005 CLIP-associating protein 1 isoform 1 TCTEX1D2 0.005 Tctex1 domain containing 2 SLIT2 0.005 slit homolog 2 LEPREL1 0.005 leprecan-like 1 isoform b LEPREL1 0.005 leprecan-like 1 isoform a RTDR1 0.004 rhabdoid tumor deletion region protein 1 PPP4R4 0.004 HEAT-like repeat-containing protein isoform 1 BTAF1 0.004 BTAF1 RNA polymerase II, B-TFIID transcription facto... LOC100129800 0.004 PREDICTED: similar to zinc finger protein 181 [Homo... LOC100291544 0.004 PREDICTED: hypothetical protein XP_002347761 LOC100129800 0.004 PREDICTED: similar to zinc finger protein 181 [Homo... TRIM16 0.004 tripartite motif-containing 16 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.