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Search of human proteins with 46397403
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46397403 centrin 3 [Homo sapiens]
(167 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46397403 centrin 3 [Homo sapiens] 328 1e-90
gi|4757974 centrin 1 [Homo sapiens] 185 1e-47
gi|4757902 caltractin [Homo sapiens] 183 7e-47
gi|58218968 calmodulin 3 [Homo sapiens] 118 3e-27
gi|4502549 calmodulin 2 [Homo sapiens] 118 3e-27
gi|5901912 calmodulin 1 [Homo sapiens] 118 3e-27
gi|4885111 calmodulin-like 3 [Homo sapiens] 116 8e-27
gi|223278387 calmodulin-like 5 [Homo sapiens] 94 5e-20
gi|21624641 calcium binding protein 4 [Homo sapiens] 92 2e-19
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 91 5e-19
gi|50897266 calmodulin-like 6 [Homo sapiens] 87 7e-18
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens] 84 6e-17
gi|11067753 calcium binding protein 5 [Homo sapiens] 83 1e-16
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens] 83 1e-16
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 82 2e-16
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens] 82 3e-16
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 80 6e-16
gi|4505303 smooth muscle and non-muscle myosin alkali light chai... 78 3e-15
gi|4507615 troponin C, slow [Homo sapiens] 78 4e-15
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens] 76 1e-14
gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f... 74 4e-14
gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo sap... 73 1e-13
gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo s... 72 2e-13
gi|88999583 myosin, light chain 6, alkali, smooth muscle and non... 71 5e-13
gi|17986258 myosin, light chain 6, alkali, smooth muscle and non... 70 6e-13
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi... 69 1e-12
gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f... 69 2e-12
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [... 68 3e-12
gi|4505305 myosin regulatory light chain 5 [Homo sapiens] 67 5e-12
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo... 65 2e-11
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 328 bits (842), Expect = 1e-90
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MSLALRSELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFD 60
MSLALRSELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFD
Sbjct: 1 MSLALRSELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFD 60
Query: 61 VKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISL 120
VKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISL
Sbjct: 61 VKKADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISL 120
Query: 121 RNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGDI 167
RNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGDI
Sbjct: 121 RNLRRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGDI 167
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 185 bits (470), Expect = 1e-47
Identities = 89/151 (58%), Positives = 120/151 (79%)
Query: 13 KTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKD 72
K K + EL+E+QKQE+++AF+LFD D ID ELKVAMRALGF+ +K ++ K++ +
Sbjct: 16 KRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISE 75
Query: 73 YDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGE 132
DRE TGKI+F DF V+T + E+D EEILKAF+LFDDD++GKIS +NL+RVA ELGE
Sbjct: 76 VDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGE 135
Query: 133 NMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163
N++DEEL+ MI+E D+DGDGE+N+EEF+ IM
Sbjct: 136 NLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
Score = 59.7 bits (143), Expect = 1e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 95 LERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEI 154
L D +E+ +AF LFD D SG I + L+ R LG EE++ MI E D++G G+I
Sbjct: 25 LTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKI 84
Query: 155 NQEEFIAIMT 164
+ +F+A+MT
Sbjct: 85 SFNDFLAVMT 94
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 183 bits (464), Expect = 7e-47
Identities = 87/151 (57%), Positives = 120/151 (79%)
Query: 13 KTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKD 72
+ + + EL+EEQKQEI++AF+LFD D ID ELKVAMRALGF+ KK ++ K++ +
Sbjct: 16 RKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISE 75
Query: 73 YDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGE 132
D+E TGK+ F DF V+T + E+D EEILKAFKLFDDD++GKIS +NL+RVA+ELGE
Sbjct: 76 IDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGE 135
Query: 133 NMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163
N++DEEL+ MI+E D+DGDGE++++EF+ IM
Sbjct: 136 NLTDEELQEMIDEADRDGDGEVSEQEFLRIM 166
Score = 58.9 bits (141), Expect = 2e-09
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 95 LERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEI 154
L + +EI +AF LFD D +G I ++ L+ R LG EE++ MI E DK+G G++
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 155 NQEEFIAIMT 164
N +F+ +MT
Sbjct: 85 NFGDFLTVMT 94
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 118 bits (295), Expect = 3e-27
Identities = 61/144 (42%), Positives = 89/144 (61%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGK 80
+L+EEQ E K+AF LFD D D I EL MR+LG + +A++ ++ + D + G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 81 ITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELR 140
I F +F ++ + + D EEI +AF++FD D +G IS LR V LGE ++DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 141 AMIEEFDKDGDGEINQEEFIAIMT 164
MI E D DGDG++N EEF+ +MT
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
Score = 43.5 bits (101), Expect = 8e-05
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREAT 78
R+ + ++EI++AF +FD D + I EL+ M LG + +V +++++ D +
Sbjct: 75 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134
Query: 79 GKITFEDFNEVVT 91
G++ +E+F +++T
Sbjct: 135 GQVNYEEFVQMMT 147
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 118 bits (295), Expect = 3e-27
Identities = 61/144 (42%), Positives = 89/144 (61%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGK 80
+L+EEQ E K+AF LFD D D I EL MR+LG + +A++ ++ + D + G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 81 ITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELR 140
I F +F ++ + + D EEI +AF++FD D +G IS LR V LGE ++DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 141 AMIEEFDKDGDGEINQEEFIAIMT 164
MI E D DGDG++N EEF+ +MT
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
Score = 43.5 bits (101), Expect = 8e-05
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREAT 78
R+ + ++EI++AF +FD D + I EL+ M LG + +V +++++ D +
Sbjct: 75 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134
Query: 79 GKITFEDFNEVVT 91
G++ +E+F +++T
Sbjct: 135 GQVNYEEFVQMMT 147
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 118 bits (295), Expect = 3e-27
Identities = 61/144 (42%), Positives = 89/144 (61%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGK 80
+L+EEQ E K+AF LFD D D I EL MR+LG + +A++ ++ + D + G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 81 ITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELR 140
I F +F ++ + + D EEI +AF++FD D +G IS LR V LGE ++DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 141 AMIEEFDKDGDGEINQEEFIAIMT 164
MI E D DGDG++N EEF+ +MT
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMMT 147
Score = 43.5 bits (101), Expect = 8e-05
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 19 RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREAT 78
R+ + ++EI++AF +FD D + I EL+ M LG + +V +++++ D +
Sbjct: 75 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 134
Query: 79 GKITFEDFNEVVT 91
G++ +E+F +++T
Sbjct: 135 GQVNYEEFVQMMT 147
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 116 bits (291), Expect = 8e-27
Identities = 58/143 (40%), Positives = 88/143 (61%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGK 80
+L+EEQ E K+AF LFD D D I EL MR+LG + +A++ ++ + DR+ G
Sbjct: 4 QLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGT 63
Query: 81 ITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELR 140
+ F +F ++ + + D EEI +AF++FD D +G +S LR V LGE +SDEE+
Sbjct: 64 VDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVD 123
Query: 141 AMIEEFDKDGDGEINQEEFIAIM 163
MI D DGDG++N EEF+ ++
Sbjct: 124 EMIRAADTDGDGQVNYEEFVRVL 146
Score = 41.6 bits (96), Expect = 3e-04
Identities = 19/72 (26%), Positives = 41/72 (56%)
Query: 19 RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREAT 78
R+ + ++EI++AF +FD D + + EL+ M LG + +V ++++ D +
Sbjct: 75 RKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGD 134
Query: 79 GKITFEDFNEVV 90
G++ +E+F V+
Sbjct: 135 GQVNYEEFVRVL 146
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 94.0 bits (232), Expect = 5e-20
Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 3/143 (2%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGK 80
EL+ E++ + K AF DTD + I+ EL A++A G ++ +A + K++ + D + G+
Sbjct: 4 ELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGE 63
Query: 81 ITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELR 140
I+F++F +T R E++ AF+ FD D G I++ LRR LG+ + EEL
Sbjct: 64 ISFQEF---LTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELD 120
Query: 141 AMIEEFDKDGDGEINQEEFIAIM 163
AMI E D D DG +N EEF ++
Sbjct: 121 AMIREADVDQDGRVNYEEFARML 143
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 92.4 bits (228), Expect = 2e-19
Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 18 KRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREA 77
K REL E+ E++ AFE FDTD+D I + EL MR LG+ + ++L++ +
Sbjct: 122 KDRELGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHIKMRM 181
Query: 78 TGKITFEDFNEVVTDWILERDPH----EEILKAFKLFDDDDSGKISLRNLRR-VARELGE 132
G++ FE+F E++ + E H E+ AF+ FD D G+I++ LR V LGE
Sbjct: 182 GGRVDFEEFVELIGPKLREETAHMLGVRELRIAFREFDRDRDGRITVAELREAVPALLGE 241
Query: 133 NMSDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
++ EL M+ E D +GDG ++ +EF+ +++
Sbjct: 242 PLAGPELDEMLREVDLNGDGTVDFDEFVMMLS 273
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 90.9 bits (224), Expect = 5e-19
Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 19 RRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREAT 78
R LSEE E K AF++FD D I EL MR LG K ++ I+++ D + +
Sbjct: 9 RSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGS 68
Query: 79 GKITFEDFNEVVTDWILER---DPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMS 135
G I FE+F ++ + E EE+ + F++FD + G I L + R GE+++
Sbjct: 69 GTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVT 128
Query: 136 DEELRAMIEEFDKDGDGEINQEEFIAIMTG 165
DEE+ +++++ DK+ DG I+ +EF+ +M G
Sbjct: 129 DEEIESLMKDGDKNNDGRIDFDEFLKMMEG 158
Score = 45.8 bits (107), Expect = 2e-05
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 16 RKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDR 75
R+ + + + ++E+ + F +FD + D ID EL RA G V ++ ++KD D+
Sbjct: 82 RQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDK 141
Query: 76 EATGKITFEDF 86
G+I F++F
Sbjct: 142 NNDGRIDFDEF 152
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 87.0 bits (214), Expect = 7e-18
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 13 KTKRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKD 72
+T LS EQ +E K FE+FD + + + EL+ M LG + K+++ + KD
Sbjct: 21 QTTTDMTERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKD 80
Query: 73 YDREATGKITFEDFNEVVTDWILERDPHE-EILKAFKLFDDDDSGKISLRNLRRVARELG 131
DR+ G + F ++ + + E E+ AF++FD + G I L+ V G
Sbjct: 81 VDRDNKGFFNCDGFLALMGVYHEKAQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAG 140
Query: 132 ENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGD 166
E +++ E M++E DKDGD I+ EEF+A+MTG+
Sbjct: 141 EPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGE 175
>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
Length = 163
Score = 84.0 bits (206), Expect = 6e-17
Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 8/152 (5%)
Query: 18 KRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREA 77
K REL E+ +E++ AF+ FD D+D I EL MR LG+ + ++++I + +
Sbjct: 14 KDRELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQI---S 70
Query: 78 TGKITFEDFNEVVTDWILERDPH----EEILKAFKLFDDDDSGKISLRNLRRVARE-LGE 132
GK+ FEDF E++ +L E+ AF+ FD + G+IS+ LR + LGE
Sbjct: 71 GGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGE 130
Query: 133 NMSDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
+S E+ ++++ D +GDG ++ EEF+ +M+
Sbjct: 131 RLSQREVDEILQDVDLNGDGLVDFEEFVRMMS 162
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 83.2 bits (204), Expect = 1e-16
Identities = 45/155 (29%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 15 KRKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYD 74
++++ R L +++ +E+++AF FD D+D I +L MR +G+ + +++++ +
Sbjct: 18 EKQRERPLGQDEIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIR 77
Query: 75 REATGKITFEDFNEVVTDWILERDPH----EEILKAFKLFDDDDSGKISLRNLRR-VARE 129
G++ F+DF E++T +L +E+ AFK FD + G+I+L L++ + R
Sbjct: 78 MNLGGRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLVELQQAMQRL 137
Query: 130 LGENMSDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
LGE ++ E+ ++ E D +GDG ++ EEF+ +M+
Sbjct: 138 LGERLTPREISEVVREADVNGDGTVDFEEFVKMMS 172
>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
Length = 220
Score = 82.8 bits (203), Expect = 1e-16
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
Query: 20 RELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATG 79
REL E+ +E++ AF+ FD D+D I EL MR LG+ + ++++I + + G
Sbjct: 73 RELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQI---SGG 129
Query: 80 KITFEDFNEVVTDWILERDPH----EEILKAFKLFDDDDSGKISLRNLRRVARE-LGENM 134
K+ FEDF E++ +L E+ AF+ FD + G+IS+ LR + LGE +
Sbjct: 130 KVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERL 189
Query: 135 SDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
S E+ ++++ D +GDG ++ EEF+ +M+
Sbjct: 190 SQREVDEILQDVDLNGDGLVDFEEFVRMMS 219
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 82.4 bits (202), Expect = 2e-16
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
Query: 17 KKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDRE 76
+K R L E+ +E+++AF FD DKD I+ +L MR +G+ + +++++ + +
Sbjct: 14 RKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMN 73
Query: 77 ATGKITFEDFNEVVTDWILERDPH----EEILKAFKLFDDDDSGKISLRNLRRVARE-LG 131
G + F+DF E++ +L +E+ AF+ FD + G+IS LR R+ LG
Sbjct: 74 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG 133
Query: 132 ENMSDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
+ ++ +I + D +GDG ++ EEF+ +M+
Sbjct: 134 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 166
>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
Length = 227
Score = 81.6 bits (200), Expect = 3e-16
Identities = 45/154 (29%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
Query: 16 RKKRRELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDR 75
R+ R L E+ +E+++AF FD DKD I+ +L MR +G+ + +++++ + +
Sbjct: 73 RQPDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINM 132
Query: 76 EATGKITFEDFNEVVTDWILERDPH----EEILKAFKLFDDDDSGKISLRNLRRVARE-L 130
G + F+DF E++ +L +E+ AF+ FD + G+IS LR R+ L
Sbjct: 133 NLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLL 192
Query: 131 GENMSDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
G + ++ +I + D +GDG ++ EEF+ +M+
Sbjct: 193 GHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 226
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 80.5 bits (197), Expect = 6e-16
Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 5/150 (3%)
Query: 20 RELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATG 79
R L E+ +E+++AF FD DKD I+ +L MR +G+ + +++++ + + G
Sbjct: 220 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGG 279
Query: 80 KITFEDFNEVVTDWILERDPH----EEILKAFKLFDDDDSGKISLRNLRRVARE-LGENM 134
+ F+DF E++ +L +E+ AF+ FD + G+IS LR R+ LG +
Sbjct: 280 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQV 339
Query: 135 SDEELRAMIEEFDKDGDGEINQEEFIAIMT 164
++ +I + D +GDG ++ EEF+ +M+
Sbjct: 340 GHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 369
Score = 38.9 bits (89), Expect = 0.002
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 92 DWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGD 151
D L + EE+ +AF+ FD D G I+ R+L R +G ++ EL + ++ + +
Sbjct: 219 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 278
Query: 152 GEINQEEFIAIM 163
G ++ ++F+ +M
Sbjct: 279 GHVDFDDFVELM 290
>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
6B [Homo sapiens]
Length = 208
Score = 78.2 bits (191), Expect = 3e-15
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 5/144 (3%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKD--YDREAT 78
E +++Q +E K+AFELFD D I Y + MRALG + A+VLK+L + D +
Sbjct: 60 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS 119
Query: 79 GKITFEDFNEVVTDWILER--DPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSD 136
++ FE F ++ R +E+ L+ F++FD + +GK+ LR V LGE M++
Sbjct: 120 RRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE 179
Query: 137 EELRAMIEEFDKDGDGEINQEEFI 160
EE+ ++ + D +G IN E F+
Sbjct: 180 EEVETVLAGHE-DSNGCINYEAFL 202
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 77.8 bits (190), Expect = 4e-15
Identities = 42/149 (28%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
Query: 21 ELSEEQKQEIKDAFELFDTD-KDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATG 79
+L+EEQK E K AF++F +D I EL MR LG + ++ +++ + D + +G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 80 KITFEDFNEVVTDWILERDP---HEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSD 136
+ F++F ++ + + EE+ F++FD + G I L L+ + + GE +++
Sbjct: 71 TVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 137 EELRAMIEEFDKDGDGEINQEEFIAIMTG 165
+++ ++++ DK+ DG I+ +EF+ M G
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
Length = 196
Score = 76.3 bits (186), Expect = 1e-14
Identities = 43/143 (30%), Positives = 75/143 (52%)
Query: 22 LSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGKI 81
LS++Q E K+ F L+D + I +L VAMR LG +V + L+ + + G++
Sbjct: 48 LSQDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDGNGEL 107
Query: 82 TFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRA 141
F F ++ I + DP +EIL A + D + G + +LR LGE ++ +E+
Sbjct: 108 DFSTFLTIMHMQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHKEVDD 167
Query: 142 MIEEFDKDGDGEINQEEFIAIMT 164
+ E D + +G++ +EFI +T
Sbjct: 168 LFREADIEPNGKVKYDEFIHKIT 190
>gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f
[Homo sapiens]
Length = 194
Score = 74.3 bits (181), Expect = 4e-14
Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATG- 79
E S+EQ+ E K+AF LFD D I ++ +RALG + A+V K+L + E
Sbjct: 46 EFSKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNA 105
Query: 80 -KITFEDFNEVVTDWILERD--PHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSD 136
KI FE F ++ +D +E+ ++ ++FD + +G + LR V LGE M +
Sbjct: 106 KKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKE 165
Query: 137 EELRAMIEEFDKDGDGEINQEEFI 160
EE+ A++ +D +G IN E F+
Sbjct: 166 EEVEALMAG-QEDSNGCINYEAFV 188
>gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo
sapiens]
Length = 162
Score = 72.8 bits (177), Expect = 1e-13
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
Query: 17 KKRRELS-EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDR 75
K R E+ E ++IK+AFE+FD + + +D E+ +R+LG + ++ ++ + +
Sbjct: 5 KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEE 64
Query: 76 EA-TGKITFEDFNEVVTDWILERD----PHEEILKAFKLFDDDDSGKISLRNLRRVAREL 130
E TG I FE F V+T+ +LER P + +L+AF++ D G ++ L + E
Sbjct: 65 EEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEE 124
Query: 131 GENMSDEELRAMIEEFDKDGDGEINQEEFIAIMTGD 166
GE S EE+ M+ IN +++I +M D
Sbjct: 125 GEPFSQEEMEEMLSAAIDPESNSINYKDYITMMVID 160
>gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo
sapiens]
Length = 166
Score = 72.0 bits (175), Expect = 2e-13
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 24 EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALG-FDVKKADVLKILKDYDREATGKIT 82
+ Q QE K+AF + D ++D ID ++L+ ALG +VK ++ +++K EA G I
Sbjct: 23 QTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKNEEIDEMIK----EAPGPIN 78
Query: 83 FEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAM 142
F F + + + DP E IL AFK+FD + G + +R + E S EE+ M
Sbjct: 79 FTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKEEVDQM 138
Query: 143 IEEFDKDGDGEINQEEFIAIMT 164
F D G ++ + + I+T
Sbjct: 139 FAAFPPDVTGNLDYKNLVHIIT 160
>gi|88999583 myosin, light chain 6, alkali, smooth muscle and
non-muscle isoform 2 [Homo sapiens]
Length = 151
Score = 70.9 bits (172), Expect = 5e-13
Identities = 45/147 (30%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKD--YDREAT 78
+ +E+Q E K+AF+LFD D I Y + MRALG + A+VLK+L + D
Sbjct: 3 DFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNV 62
Query: 79 GKITFEDFNEVVTDWILERD--PHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSD 136
+ FE F ++ +D +E+ ++ ++FD + +G + +R V LGE M++
Sbjct: 63 KVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 122
Query: 137 EELRAMIEEFDKDGDGEINQEEFIAIM 163
EE+ ++ + D +G IN EE + ++
Sbjct: 123 EEVEMLVAGHE-DSNGCINYEELVRMV 148
>gi|17986258 myosin, light chain 6, alkali, smooth muscle and
non-muscle isoform 1 [Homo sapiens]
Length = 151
Score = 70.5 bits (171), Expect = 6e-13
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKD--YDREAT 78
+ +E+Q E K+AF+LFD D I Y + MRALG + A+VLK+L + D
Sbjct: 3 DFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEMNV 62
Query: 79 GKITFEDFNEVVTDWILERD--PHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSD 136
+ FE F ++ +D +E+ ++ ++FD + +G + +R V LGE M++
Sbjct: 63 KVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 122
Query: 137 EELRAMIEEFDKDGDGEINQEEFI 160
EE+ ++ + D +G IN E F+
Sbjct: 123 EEVEMLVAGHE-DSNGCINYEAFV 145
>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
sapiens]
Length = 172
Score = 69.3 bits (168), Expect = 1e-12
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 14 TKRKKRRELS-------EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADV 66
TK++ +R S + Q QE K+AF + D ++D ID +L + +LG K
Sbjct: 11 TKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLG----KNPT 66
Query: 67 LKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRV 126
+ L+ EA G I F F + + + DP + I AF FD++ SG I +LR +
Sbjct: 67 DEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLREL 126
Query: 127 ARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163
+G+ +DEE+ M E D G N EF I+
Sbjct: 127 LTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 163
>gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f
[Homo sapiens]
Length = 150
Score = 68.6 bits (166), Expect = 2e-12
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 23 SEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATG--K 80
S +Q E K+AF LFD D I ++ +RALG + A+V K+L + E K
Sbjct: 4 SADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKK 63
Query: 81 ITFEDFNEVVTDWILERD--PHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEE 138
I FE F ++ +D +E+ ++ ++FD + +G + LR V LGE M +EE
Sbjct: 64 IEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEE 123
Query: 139 LRAMIEEFDKDGDGEINQEEFI 160
+ A++ +D +G IN E F+
Sbjct: 124 VEALMAG-QEDSNGCINYEAFV 144
>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
[Homo sapiens]
Length = 171
Score = 68.2 bits (165), Expect = 3e-12
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 13 KTKRKKRRE---------LSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKK 63
KTK KKR + + Q QE K+AF + D ++D ID +L + +LG K
Sbjct: 7 KTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLG----K 62
Query: 64 ADVLKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNL 123
+ L EA G I F F + + + DP + I AF FD++ +G I L
Sbjct: 63 NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYL 122
Query: 124 RRVARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163
R + +G+ +DEE+ + E D G N EF I+
Sbjct: 123 RELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 162
>gi|4505305 myosin regulatory light chain 5 [Homo sapiens]
Length = 173
Score = 67.4 bits (163), Expect = 5e-12
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 24 EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGKITF 83
+ Q QE K+AF L D ++D ID +LK +LG K D L + +EA+G I F
Sbjct: 29 QTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYASLGKTNVKDDELDAML---KEASGPINF 85
Query: 84 EDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMI 143
F + + + D E IL AFK+ D D GKI+ ++R+ + M+ EE+ M
Sbjct: 86 TMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKINKEYIKRLLMSQADKMTAEEVDQMF 145
Query: 144 EEFDKDGDGEINQEEFIAIMT 164
+ D G ++ + ++T
Sbjct: 146 QFASIDVAGNLDYKALSYVIT 166
Score = 32.7 bits (73), Expect = 0.15
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 96 ERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGE-NMSDEELRAMIEEFDKDGDGEI 154
E+ +E +AF L D + G I +L+ LG+ N+ D+EL AM+ K+ G I
Sbjct: 28 EQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYASLGKTNVKDDELDAML----KEASGPI 83
Query: 155 NQEEFI 160
N F+
Sbjct: 84 NFTMFL 89
>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 65.5 bits (158), Expect = 2e-11
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 14 TKRKKRRELS-------EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADV 66
TK++ +R S + Q QE K+AF + D ++D ID +L + +LG + A +
Sbjct: 11 TKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYL 70
Query: 67 LKILKDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRV 126
++ EA G I F F + + + DP + I AF FD++ +G I LR +
Sbjct: 71 DAMMN----EAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLREL 126
Query: 127 ARELGENMSDEELRAMIEEFDKDGDGEINQEEFIAIM 163
+G+ +DEE+ + E D G N EF I+
Sbjct: 127 LTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRIL 163
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,506,727
Number of Sequences: 37866
Number of extensions: 235687
Number of successful extensions: 2369
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 1600
Number of HSP's gapped (non-prelim): 655
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.