CABP1 3598

Name: CABP1	Sequence: fasta or formatted (227aa)		NCBI GI: 13929432
Description: calcium binding protein 1 isoform 1		Referenced in: Calmodulin and Calcium
Other entries for this name: alt prot [167aa] calcium binding protein 1 isoform 2 alt prot [370aa] calcium binding protein 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 12 2 C cysteine 2.6 6 1 D aspartate 7.9 18 2 E glutamate 11.5 26 2 F phenylalanine 4.4 10 1 G glycine 7.9 18 2 H histidine 1.8 4 1 I isoleucine 4.4 10 2 K lysine 3.5 8 1 L leucine 10.6 24 2 M methionine 6.6 15 2 N asparagine 4.8 11 1 P proline 3.5 8 1 Q glutamine 3.5 8 2 R arginine 8.4 19 1 S serine 3.5 8 1 T threonine 3.1 7 1 V valine 4.8 11 2 W tryptophan 0.0 0 0 Y tyrosine 1.8 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium binding protein 1 isoform 1 CABP1 0.651 calcium binding protein 1 isoform 3 CABP1 0.651 calcium binding protein 1 isoform 2 CABP2 0.546 calcium binding protein 2 isoform 1 CABP5 0.532 calcium binding protein 5 CABP2 0.491 calcium binding protein 2 isoform 2 CABP4 0.411 calcium binding protein 4 CALM3 0.225 calmodulin 3 CALM2 0.225 calmodulin 2 CALM1 0.225 calmodulin 1 CALML3 0.220 calmodulin-like 3 TNNC2 0.177 fast skeletal muscle troponin C CALML5 0.163 calmodulin-like 5 TNNC1 0.158 troponin C, slow CALN1 0.149 calneuron 1 isoform 2 CALN1 0.149 calneuron 1 isoform 1 CETN1 0.142 centrin 1 CETN2 0.140 caltractin CABP7 0.138 calcium binding protein 7 CETN3 0.131 centrin 3 CALML6 0.117 calmodulin-like 6 CALML4 0.106 calmodulin-like 4 isoform 1 LOC100292202 0.092 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.092 solute carrier family 25, member 25 isoform b MYL12B 0.092 myosin regulatory light chain MRCL2 isoform A [Homo... MYL12B 0.092 myosin regulatory light chain MRCL2 isoform B [Homo... MYL12B 0.092 myosin regulatory light chain MRCL2 isoform A [Homo... MYL12B 0.092 myosin regulatory light chain MRCL2 isoform A MYL9 0.092 myosin regulatory light chain 9 isoform a MYL12A 0.089 myosin, light chain 12A, regulatory, non-sarcomeric [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.